Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_M22
         (281 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     23   0.94 
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   1.2  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    20   5.0  
AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8 ...    20   5.0  

>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 0.94
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -1

Query: 194 PVWLDTVQLNPT 159
           P W D V LNPT
Sbjct: 338 PAWCDRVLLNPT 349


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 22.2 bits (45), Expect = 1.2
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -3

Query: 135 KYLYLVFSLSASDSSWTVIID 73
           KYLY++         WTV+ D
Sbjct: 439 KYLYMLMEACLGGELWTVLRD 459


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 20.2 bits (40), Expect = 5.0
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 72  NQLLRSTNCPKP 107
           NQL+R T C  P
Sbjct: 403 NQLIRYTRCENP 414


>AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8
           protein.
          Length = 208

 Score = 20.2 bits (40), Expect = 5.0
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +1

Query: 94  TVRSR*GKNKV*ILLLQRNSTKVGFSCT 177
           TVR+R G  K   L L   +   G  CT
Sbjct: 45  TVRTRGGNKKYRALRLDTGNFSWGSECT 72


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,109
Number of Sequences: 438
Number of extensions: 1536
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5494764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)