Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_M20
(550 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g34220.1 68417.m04862 leucine-rich repeat transmembrane prote... 31 0.38
At5g55210.1 68418.m06882 expressed protein similar to unknown pr... 30 1.2
At2g36670.2 68415.m04498 aspartyl protease family protein contai... 30 1.2
At2g05645.1 68415.m00604 hypothetical protein 30 1.2
At3g02740.1 68416.m00266 aspartyl protease family protein contai... 29 1.5
At1g08210.1 68414.m00907 aspartyl protease family protein contai... 29 1.5
At5g43190.1 68418.m05276 F-box family protein (FBX6) contains si... 28 3.6
At1g48690.1 68414.m05449 auxin-responsive GH3 family protein sim... 28 3.6
At5g10710.2 68418.m01241 expressed protein 28 4.7
At5g10710.1 68418.m01240 expressed protein 28 4.7
At4g21240.1 68417.m03071 F-box family protein contains F-box dom... 28 4.7
At2g16950.1 68415.m01953 importin beta-2 subunit family protein ... 28 4.7
At1g72800.1 68414.m08416 nuM1-related contains similarity with n... 28 4.7
At5g22850.1 68418.m02671 aspartyl protease family protein contai... 27 6.2
At3g28850.1 68416.m03599 glutaredoxin family protein 27 6.2
At2g34210.1 68415.m04186 KOW domain-containing transcription fac... 27 6.2
At1g65180.1 68414.m07390 DC1 domain-containing protein contains ... 27 6.2
At3g03690.1 68416.m00372 glycosyltransferase family 14 protein /... 27 8.3
At3g01200.1 68416.m00026 expressed protein contains Pfam domain ... 27 8.3
>At4g34220.1 68417.m04862 leucine-rich repeat transmembrane protein
kinase, putative protein kinase TMKL1, Arabidopsis
thaliana, PID:E353150
Length = 757
Score = 31.5 bits (68), Expect = 0.38
Identities = 26/91 (28%), Positives = 44/91 (48%)
Frame = -1
Query: 535 HIISLSKGNPRGIVSKHTLHRQAYLAFIVDISIDGKTIPVLTGVTMTNIWRGKPPRVPRG 356
H ++LS G +S + + A VD+S + T P+ + +++ N + G
Sbjct: 222 HYLNLSHNKVLGEISPNFAEKFPANA-TVDLSFNNLTGPIPSSLSLLN----QKAESFSG 276
Query: 355 NRSLCGKPRRLLYHQLSMLLKPVPVVSKPFS 263
N+ LCGKP ++L S L P P +S+ S
Sbjct: 277 NQELCGKPLKILCSIPSTLSNP-PNISETTS 306
>At5g55210.1 68418.m06882 expressed protein similar to unknown
protein (pir||T04913)
Length = 168
Score = 29.9 bits (64), Expect = 1.2
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 172 INSTLVRTTSSAARSRCTAL-SNRDRGLKTYWKKVSTQLEQVSRASRVGG 318
+ S L RT+S + TA+ S R R K W +VST V RAS+ G
Sbjct: 4 VGSRLSRTSSRYSGPAATAVFSGRVRKWKKKWVRVSTSSVGVFRASKSNG 53
>At2g36670.2 68415.m04498 aspartyl protease family protein contains
Pfam profile: PF00026 eukaryotic aspartyl protease
Length = 507
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -1
Query: 475 RQAYLAFIVDISIDGKTIPVLTGVTMTNIWRGKPP 371
RQ+ + +VD + G + P L G+ T + G PP
Sbjct: 76 RQSSVGGVVDFPVQGSSDPYLVGLYFTKVKLGSPP 110
>At2g05645.1 68415.m00604 hypothetical protein
Length = 204
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -1
Query: 316 HQLSMLLKPVPVVSKPFSNMFLVHG 242
H+ +LL P P++S P S+MF+ HG
Sbjct: 130 HRPFVLLMPRPLLSSPHSHMFVEHG 154
>At3g02740.1 68416.m00266 aspartyl protease family protein contains
Pfam profile: PF00026 eukaryotic aspartyl protease
Length = 488
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -1
Query: 502 GIVSKHTLHRQAYLAFIVDISIDGKTIPVLTGVTMTNIWRGKPPR 368
G + H +HR + L +DI + G + P G+ I G P R
Sbjct: 52 GALRAHDVHRHSRLLSAIDIPLGGDSQPESIGLYFAKIGLGTPSR 96
>At1g08210.1 68414.m00907 aspartyl protease family protein contains
Pfam profile PF00026: Eukaryotic aspartyl protease;
similar to CND41, chloroplast nucleoid DNA binding
protein (GI:2541876) {Nicotiana tabacum}
Length = 492
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -1
Query: 493 SKHTLHRQAYLAFIVDISIDGKTIPVLTGVTMTNIWRGKPPR 368
++H Q+ + +V+ +DG + P L G+ T + G PPR
Sbjct: 54 ARHGRLLQSPVGGVVNFPVDGASDPFLVGLYYTKVKLGTPPR 95
>At5g43190.1 68418.m05276 F-box family protein (FBX6) contains
similarity to unusual floral organs (UFO) GI:4376159
from [Arabidopsis thaliana]
Length = 403
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 85 LLVPNTIAWAAS*ASMTNALTCSKSIASSINSTLVRTTSSAARS 216
L PN I+W + +LTC+ S+ SS N L + S ++ S
Sbjct: 112 LFNPNLISWCTLPLPRSLSLTCASSLLSSSNGLLCFSLSPSSVS 155
>At1g48690.1 68414.m05449 auxin-responsive GH3 family protein
similar to auxin-responsive GH3 product [Glycine max]
GI:18591; contains Pfam profile PF03321: GH3
auxin-responsive promoter
Length = 190
Score = 28.3 bits (60), Expect = 3.6
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 295 KPVPVVSKPFSNMFLVHGLCSIT 227
K PV +K F NM +H LCS T
Sbjct: 99 KIFPVNNKYFENMIFIHALCSST 121
>At5g10710.2 68418.m01241 expressed protein
Length = 312
Score = 27.9 bits (59), Expect = 4.7
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = -3
Query: 194 VLTSVEFIDEAIDFEHVKAFVIDAHEAAHAIVFGTNKYTNDCVNSLI*HNIDRHLERLVI 15
VL S F+++ I EH F + + + ++F K D V L+ +DR + +I
Sbjct: 142 VLESKSFLEKMIVLEHTIPFFLPLSDLENDLLFSNAKKFIDNVGDLLQAYVDRKEQVRLI 201
Query: 14 K 12
K
Sbjct: 202 K 202
>At5g10710.1 68418.m01240 expressed protein
Length = 312
Score = 27.9 bits (59), Expect = 4.7
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = -3
Query: 194 VLTSVEFIDEAIDFEHVKAFVIDAHEAAHAIVFGTNKYTNDCVNSLI*HNIDRHLERLVI 15
VL S F+++ I EH F + + + ++F K D V L+ +DR + +I
Sbjct: 142 VLESKSFLEKMIVLEHTIPFFLPLSDLENDLLFSNAKKFIDNVGDLLQAYVDRKEQVRLI 201
Query: 14 K 12
K
Sbjct: 202 K 202
>At4g21240.1 68417.m03071 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 419 RYGFTIN*YVYYEGEIRLSVECMF 490
R G IN +VYYE +IR V+ +F
Sbjct: 227 RVGTCINGHVYYEAQIRFKVDDIF 250
>At2g16950.1 68415.m01953 importin beta-2 subunit family protein
similar to SP|Q92973 Importin beta-2 subunit
(Transportin) {Homo sapiens}; contains Pfam profile
PF03810: Importin-beta N-terminal domain
Length = 891
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 85 NIRTTASTALSDITSIDTLKGW 20
NIRTT T +S I +I+ + GW
Sbjct: 109 NIRTTVGTIISVIVNIEGVSGW 130
>At1g72800.1 68414.m08416 nuM1-related contains similarity with nuM1
GI:1279563 from [Medicago sativa]
Length = 335
Score = 27.9 bits (59), Expect = 4.7
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = -3
Query: 401 DDEHLERQTAEGSER*QKPVRKAKATLIPP-TLDALETCS---SCVETFFQYVFSPRSLF 234
DD +++ + + S ++PV K A+ P T D+L + + ++ F F P SLF
Sbjct: 109 DDSYMDTSSEDESSSAEEPVNKPAASAAKPATKDSLFSAGFKPAAKDSLFSAGFKPDSLF 168
Query: 233 DNAVHLERAADDVVLTS 183
+ E AA D + ++
Sbjct: 169 --SAGFEPAAKDSLFSA 183
>At5g22850.1 68418.m02671 aspartyl protease family protein contains
Pfam profile: PF00026 eukaryotic aspartyl protease
Length = 493
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -1
Query: 463 LAFIVDISIDGKTIPVLTGVTMTNIWRGKPPR 368
L ++D +DG P + G+ T + G PPR
Sbjct: 61 LGGVIDFPVDGTFDPFVVGLYYTKLRLGTPPR 92
>At3g28850.1 68416.m03599 glutaredoxin family protein
Length = 428
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -3
Query: 500 HCVETYTPPTSVSRLHSRH 444
HC Y+PP V R HS H
Sbjct: 14 HCRRGYSPPVDVQRSHSVH 32
>At2g34210.1 68415.m04186 KOW domain-containing transcription factor
family protein
Length = 990
Score = 27.5 bits (58), Expect = 6.2
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +3
Query: 54 DKAVDAVVRIFIGPKYDCMGRLMSINDKRLDMLEIDSFVYKLDTGKNNIVRSSL 215
D V V+I +GP GRL+ + DK L +E+++ K+ TGK + R ++
Sbjct: 683 DHLVGTYVKIRLGPFKGYSGRLVEVKDK-LVRVELEA---KIVTGKLHFERKAI 732
>At1g65180.1 68414.m07390 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 653
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
Frame = -1
Query: 382 GKPPRVPRGNRSLCGKP--RRLLYH 314
GKPP GN SLCGK + YH
Sbjct: 186 GKPPAYTDGNCSLCGKKIFDEMFYH 210
>At3g03690.1 68416.m00372 glycosyltransferase family 14 protein /
core-2/I-branching enzyme family protein contains Pfam
profile: PF02485 Core-2/I-Branching enzyme
Length = 378
Score = 27.1 bits (57), Expect = 8.3
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = -1
Query: 535 HIISLSKGNPRGI--VSKHTLHRQAYLAFIVDISIDGKTIPVLTGVTMTNIWRGKPPRVP 362
++IS SKG+ + + + HR+ + +++ + ++ P + M G+P P
Sbjct: 56 YLISASKGDAGKLKRLLRSLYHRRNH--YLIHLDLEA---PEEEHLEMIRFVAGEPLFQP 110
Query: 361 RGNRSLCGKPRRLLYHQLSML 299
GN + GKP + Y +ML
Sbjct: 111 EGNVMIVGKPNLVTYRGPTML 131
>At3g01200.1 68416.m00026 expressed protein contains Pfam domain
PF03618: Domain of unknown function (DUF299)
Length = 377
Score = 27.1 bits (57), Expect = 8.3
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Frame = +3
Query: 111 GRLMSINDKRLDMLEIDSFVYKLDTG--KNNIVRSSLEMHGVIE--QRPWTKNILEKGFD 278
GR+ ++ND +E F K D G N+ ++ + + GV + P + I +KG+
Sbjct: 202 GRVKTLNDAYFKRIEAIEFTIKQDDGTLPENLSKADIVLVGVSRTGKTPLSTYIAQKGYK 261
Query: 279 TTGTGF 296
F
Sbjct: 262 VANVPF 267
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,808,176
Number of Sequences: 28952
Number of extensions: 238071
Number of successful extensions: 732
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 731
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1033331880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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