Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_M19
(553 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 115 5e-27
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 76 3e-15
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 54 2e-08
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 41 1e-04
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 36 0.003
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 35 0.009
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 32 0.049
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 31 0.15
SPAC17G8.03c |dpb3||DNA polymerase epsilon subunit Dpb3|Schizosa... 27 1.8
SPCC1322.06 |kap113||karyopherin Kap113|Schizosaccharomyces pomb... 27 1.8
SPCC132.04c |||NAD-dependent glutamate dehydrogenase |Schizosacc... 26 4.2
SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual 26 4.2
SPAC27E2.01 |||alpha-amylase homolog |Schizosaccharomyces pombe|... 25 7.4
SPAC2C4.06c |||rRNA methyltransferase |Schizosaccharomyces pombe... 25 7.4
SPBC543.03c |pku80||Ku domain protein Pku80|Schizosaccharomyces ... 25 9.8
SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces po... 25 9.8
SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|c... 25 9.8
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 115 bits (276), Expect = 5e-27
Identities = 62/153 (40%), Positives = 86/153 (56%), Gaps = 2/153 (1%)
Frame = +2
Query: 101 ARLIALEQDMAKYKPTTDELSANAVEEFVQSFFAGTLKQHLLSEDLPSDWAAKPVKTLVA 280
A +IA + M KY T EL+A A+ +FV F G L+ + S+ +P + + + LVA
Sbjct: 305 AFVIANLKSMLKYPFPTTELTAKAMTKFVGDFVDGKLQPKIKSQPIPE--SQEDLVVLVA 362
Query: 281 TNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANELEH 460
NFD+IV D K VLVEFYAPWCGHCK L P Y+KL E + T N++
Sbjct: 363 DNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTYEKLAEEYSDDSNVVVAKIDATENDIS- 421
Query: 461 TKITSFPTIKLYTKDNQVRD--YHGERTLAGLT 553
I+ FPTI + +++V Y G+RTL L+
Sbjct: 422 VSISGFPTIMFFKANDKVNPVRYEGDRTLEDLS 454
Score = 56.8 bits (131), Expect = 2e-09
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +2
Query: 311 NKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANEL-EHTKITSFPTI 487
+K ++V+FYAPWCGHCK L P Y+ + E +L I +PT+
Sbjct: 39 DKVLMVKFYAPWCGHCKALAPEYESAADELEKDGISLVEVDCTEEGDLCSEYSIRGYPTL 98
Query: 488 KLYTKDNQVRDYHGER 535
++ Q+ Y G R
Sbjct: 99 NVFKNGKQISQYSGPR 114
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 76.2 bits (179), Expect = 3e-15
Identities = 41/100 (41%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Frame = +2
Query: 263 VKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHF--EXXXXXXXXXXX 436
V L + NFD++V D K VLVEFYA WCG+CK+L P Y+ LG+ F E
Sbjct: 142 VVELDSLNFDKVVMDDKKDVLVEFYADWCGYCKRLAPTYETLGKVFKNEPNVEIVKINAD 201
Query: 437 XTANELEHTKITSFPTIKLYTKDNQVRD--YHGERTLAGL 550
A+ ++ SFPTIK + KD++ + Y G+R+L L
Sbjct: 202 VFADIGRLHEVASFPTIKFFPKDDKDKPELYEGDRSLESL 241
Score = 56.0 bits (129), Expect = 3e-09
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +2
Query: 308 TNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANE--LEHTKITSFP 481
+ K L+EFYA WCGHCK L P+Y++LG FE + + IT FP
Sbjct: 38 SKKGALIEFYATWCGHCKSLAPVYEELGALFEDHNDVLIGKIDADTHSDVADKYHITGFP 97
Query: 482 TIKLYTKD-NQVRDYHGERTLAGLT 553
T+ + D ++ Y R + LT
Sbjct: 98 TLIWFPPDGSEPVQYSNARDVDSLT 122
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 53.6 bits (123), Expect = 2e-08
Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Frame = +2
Query: 323 LVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANE--LEHTKITSFPTIKLY 496
LV FYAPWCG+CK+LVP Y KL + N ++ FPTIKL
Sbjct: 52 LVVFYAPWCGYCKKLVPTYQKLASNLHSLLPVTAVDCDADQNRAVCSQYQVQGFPTIKLV 111
Query: 497 ---TKDNQV--RDYHGERTLAGL 550
+K + + DY+G+R+ L
Sbjct: 112 YPSSKGSSLSSTDYNGDRSYKSL 134
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 40.7 bits (91), Expect = 1e-04
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = +2
Query: 311 NKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANELEHTKITSFPTIK 490
+K +V+FYA WCG CK L P +KL E + ++ + + + PT+
Sbjct: 35 DKVTVVDFYADWCGPCKYLKPFLEKLSEQNQKASFIAVNADKF-SDIAQKNGVYALPTMV 93
Query: 491 LYTKDNQV 514
L+ K ++
Sbjct: 94 LFRKGQEL 101
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 36.3 bits (80), Expect = 0.003
Identities = 19/84 (22%), Positives = 37/84 (44%)
Frame = +2
Query: 278 ATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANELE 457
++ F IV +K V+V+F+A WCG CK + P +++ + + E
Sbjct: 8 SSEFKSIVCQ-DKLVVVDFFATWCGPCKAIAPKFEQFSNTYSDATFIKVDVDQLSEIAAE 66
Query: 458 HTKITSFPTIKLYTKDNQVRDYHG 529
+ + P+ LY ++ + G
Sbjct: 67 -AGVHAMPSFFLYKNGEKIEEIVG 89
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 34.7 bits (76), Expect = 0.009
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 263 VKTLVATNFDEIVFDTNKKV-LVEFYAPWCGHCKQLVPIYDKLGE 394
V+ F EI+ + +++ L+ FYAPW CKQ+ ++D+ +
Sbjct: 3 VEITFVEQFQEILQNGKEQIILLNFYAPWAAPCKQMNQVFDQFAK 47
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 32.3 bits (70), Expect = 0.049
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 326 VEFYAPWCGHCKQLVPIYDKLGEHF 400
V+ YA WCG CK + P++ +L +
Sbjct: 24 VDCYADWCGPCKAISPLFSQLASKY 48
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 30.7 bits (66), Expect = 0.15
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 326 VEFYAPWCGHCKQLVPIYDKLGE 394
+++Y P CG CK+L P++D + E
Sbjct: 47 IKYYLPSCGACKRLGPMWDNMVE 69
>SPAC17G8.03c |dpb3||DNA polymerase epsilon subunit
Dpb3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 199
Score = 27.1 bits (57), Expect = 1.8
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +2
Query: 83 KEEVPAARL---IALEQDMAKYKPTTDELSANAVEEFVQSFFAGTLKQHLLSE 232
K P AR+ + +QD+ K T + + A+E F+QS + KQ L +
Sbjct: 21 KSRFPVARIKKIMQADQDVGKVAQVTPVIMSKALELFMQSIIQESCKQTRLHQ 73
>SPCC1322.06 |kap113||karyopherin Kap113|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 983
Score = 27.1 bits (57), Expect = 1.8
Identities = 9/30 (30%), Positives = 20/30 (66%)
Frame = -1
Query: 130 HVLFESDQSCRWNFFLLHAEEL*DSLVFIL 41
HV+FE+D W+ FL++ ++L ++ ++
Sbjct: 678 HVIFEADAMELWSTFLMYIQKLPETFTLLI 707
>SPCC132.04c |||NAD-dependent glutamate dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1106
Score = 25.8 bits (54), Expect = 4.2
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +2
Query: 263 VKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEH 397
V T A +E+ + +EF A W GH + +P Y L H
Sbjct: 969 VPTFYADYVNEVKRIIQRNANLEFEAIWKGHSENKIP-YTSLSNH 1012
>SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 25.8 bits (54), Expect = 4.2
Identities = 14/58 (24%), Positives = 29/58 (50%)
Frame = +2
Query: 152 DELSANAVEEFVQSFFAGTLKQHLLSEDLPSDWAAKPVKTLVATNFDEIVFDTNKKVL 325
++ + N+ + +Q + T +HL + L + P KT + NF+EI + + + L
Sbjct: 187 EQETENSSTKDLQVYDFQTASEHLPEQSLQNTTYYDPSKTYSSVNFEEIEYGKSHEKL 244
>SPAC27E2.01 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 491
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 263 VKTLVAT-NFDEIVFDTNKKVLVEFYAPW 346
++ L+ T +FD + DT K V EFY P+
Sbjct: 206 IRDLIQTYHFDGLRIDTAKHVQKEFYPPF 234
>SPAC2C4.06c |||rRNA methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 455
Score = 25.0 bits (52), Expect = 7.4
Identities = 20/69 (28%), Positives = 30/69 (43%)
Frame = +2
Query: 71 FGMKKEEVPAARLIALEQDMAKYKPTTDELSANAVEEFVQSFFAGTLKQHLLSEDLPSDW 250
F KK + R AL + KYKP DE+ A + + F++ A L LL
Sbjct: 26 FNSKKHD--PKRTYALVCETLKYKPVLDEIIARS-DCFLKENLARVLVHDLLMSKRGLSI 82
Query: 251 AAKPVKTLV 277
+ P+K +
Sbjct: 83 SNGPIKECI 91
>SPBC543.03c |pku80||Ku domain protein Pku80|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 695
Score = 24.6 bits (51), Expect = 9.8
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = -1
Query: 250 PVRGQVLAQQVLFQSS---SEERLHEFLNSVSAKLIGGRFVLSHV 125
PV+ + +Q+ F + SEE++ E LNS + G + ++ HV
Sbjct: 541 PVKPKYSSQETAFDTGAPISEEQIEELLNSGLDEQEGEKLLVLHV 585
>SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 412
Score = 24.6 bits (51), Expect = 9.8
Identities = 17/68 (25%), Positives = 28/68 (41%)
Frame = +2
Query: 59 ILEFFGMKKEEVPAARLIALEQDMAKYKPTTDELSANAVEEFVQSFFAGTLKQHLLSEDL 238
++ + G +K E A L D+ E+S + V +FFA L E +
Sbjct: 159 VIVYEGTEKSEKAVADLNDSSTDVVP----ESEVSFQTISSRVDNFFAAPLPSEQAEELI 214
Query: 239 PSDWAAKP 262
D+A +P
Sbjct: 215 EDDYAEQP 222
>SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|chr
2|||Manual
Length = 807
Score = 24.6 bits (51), Expect = 9.8
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -2
Query: 297 ISSKLVATKVLTGLAAQSEGRSSLNKCCFRVPAKNDC 187
+ KLV +K L ++ + SL KC F NDC
Sbjct: 457 LKPKLVISKSFGTLIVKNHNQLSLLKCTFSNLDGNDC 493
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,979,292
Number of Sequences: 5004
Number of extensions: 35433
Number of successful extensions: 125
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 123
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 229961028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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