Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_M19
(553 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 197 6e-51
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 101 4e-22
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 98 5e-21
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 70 1e-12
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 60 1e-09
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 57 1e-08
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 6e-08
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 51 5e-07
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 51 5e-07
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 9e-06
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 46 2e-05
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 46 3e-05
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 45 5e-05
SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) 42 3e-04
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 39 0.002
SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05) 35 0.038
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 35 0.038
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 35 0.051
SB_49486| Best HMM Match : MARVEL (HMM E-Value=1.6) 30 1.4
SB_32416| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0021) 28 4.4
SB_18738| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_52464| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_50316| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_21263| Best HMM Match : Thioredoxin (HMM E-Value=0.00093) 28 5.8
SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_53535| Best HMM Match : zf-C2H2 (HMM E-Value=4.8e-32) 27 7.7
SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 197 bits (480), Expect = 6e-51
Identities = 88/181 (48%), Positives = 124/181 (68%), Gaps = 1/181 (0%)
Frame = +2
Query: 2 YRDKLMTVAIDADEDEHQRILEFFGMKKEEVPAARLIAL-EQDMAKYKPTTDELSANAVE 178
++ K++ V ++ + +++QRI+EFFG++ E+P RLI L + DM KYKPT E+++ V+
Sbjct: 298 FKGKVLFVYVNTEVEDNQRIVEFFGIQSSELPTIRLINLADDDMTKYKPTAAEITSENVK 357
Query: 179 EFVQSFFAGTLKQHLLSEDLPSDWAAKPVKTLVATNFDEIVFDTNKKVLVEFYAPWCGHC 358
EFVQ+F LK HLLS ++P DW +KPVK L NFDE+ + +K V VEFYAPWCGHC
Sbjct: 358 EFVQAFLDKKLKPHLLSAEIPEDWDSKPVKVLCGKNFDEVARNKDKNVFVEFYAPWCGHC 417
Query: 359 KQLVPIYDKLGEHFEXXXXXXXXXXXXTANELEHTKITSFPTIKLYTKDNQVRDYHGERT 538
KQL PI+D+LGE ++ TANE+E K+ SFPTIK + K+ + DY+G RT
Sbjct: 418 KQLAPIWDQLGEKYKDHADIVVAKMDSTANEVEGVKVHSFPTIKYFPKEGEAVDYNGGRT 477
Query: 539 L 541
L
Sbjct: 478 L 478
Score = 68.5 bits (160), Expect = 3e-12
Identities = 39/95 (41%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Frame = +2
Query: 263 VKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXT 442
V L NFDE V NK VLVEFYAPWCGHCK L P Y K +
Sbjct: 26 VLVLTEKNFDEAVA-ANKHVLVEFYAPWCGHCKALAPEYAKAAGQLKSEKSEIKLAKVDA 84
Query: 443 ANEL---EHTKITSFPTIKLYTKDNQVRDYHGERT 538
E E ++ +PTIK + KD + +Y G RT
Sbjct: 85 TAETKLGEKFQVQGYPTIKFF-KDGKPSEYAGGRT 118
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 101 bits (242), Expect = 4e-22
Identities = 53/139 (38%), Positives = 78/139 (56%)
Frame = +2
Query: 35 ADEDEHQRILEFFGMKKEEVPAARLIALEQDMAKYKPTTDELSANAVEEFVQSFFAGTLK 214
A +++R+L G+ + P+A + D K ++ S ++ ++F++ +FAG+LK
Sbjct: 792 ASFSDYERVLSDIGVTDKANPSAVVYNDAGDKFLMK---EKFSVDSFKQFLEDYFAGSLK 848
Query: 215 QHLLSEDLPSDWAAKPVKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGE 394
H+ SE LP PVK +V NF EIV D K VL+EFYAPWCGHCK L P Y++LGE
Sbjct: 849 PHIKSEPLPESNDG-PVKVVVGENFKEIVNDPTKDVLIEFYAPWCGHCKSLEPKYNELGE 907
Query: 395 HFEXXXXXXXXXXXXTANE 451
+ TAN+
Sbjct: 908 KLQDVKDIVIAKMDATAND 926
Score = 54.4 bits (125), Expect = 6e-08
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Frame = +2
Query: 320 VLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANELEHT----KITSFPTI 487
+LVEF+APWCGHCK+L P Y+ E + + T ++ +PT+
Sbjct: 558 MLVEFFAPWCGHCKRLAPEYETAAEALKKNDPPVPLAKVDCTEAGKDTCSKYGVSGYPTL 617
Query: 488 KLYTKDNQVRDYHGERTLAGL 550
K++ +DY G R +G+
Sbjct: 618 KIFRNGEMSKDYDGPRDSSGI 638
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 97.9 bits (233), Expect = 5e-21
Identities = 66/184 (35%), Positives = 98/184 (53%), Gaps = 6/184 (3%)
Frame = +2
Query: 17 MTVAIDADEDEHQRILEFFGMKKEEVPAARLIALEQDMAKYK--PTTDELSANAVEEFVQ 190
+T AI A+E+E ++ L+ FG+ E + +++ K++ P +E S +++ EFV+
Sbjct: 446 ITFAI-ANEEESEQELKDFGLA-ESGEEVNVGCFDKEGRKFRMDPDEEEFSEDSLREFVE 503
Query: 191 SFFAGTLKQHLLSEDLPSDWAAKPVKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLV 370
F AG LK + S+ +P +PV +V FDEIV D K VL+EFYAPWCG L
Sbjct: 504 EFKAGNLKPIIKSQPVPKS-NKEPVTVVVGKTFDEIVNDPKKDVLIEFYAPWCGIA--LE 560
Query: 371 PIYDKLGEHFEXXXXXXXXXXXXTANELEHT-KITSFPTIKLYT---KDNQVRDYHGERT 538
P + KLG+HF TAN++ T + FPTI T K N ++ + G R
Sbjct: 561 PTFKKLGKHFRNDKNIVIAKIDATANDVPSTYAVEGFPTIYFATSKDKKNPIK-FDGGRE 619
Query: 539 LAGL 550
L L
Sbjct: 620 LKDL 623
Score = 66.9 bits (156), Expect = 1e-11
Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 5/161 (3%)
Frame = +2
Query: 83 KEEVPAARLIALEQDMAKYKPTTDELSANAVEEFVQSFFAGTLKQHLLSEDLPSDWAAKP 262
K + A IA D++ Y PT E+ + +++ + P+ W P
Sbjct: 118 KMDATVASDIAQRFDVSGY-PTLKIFRKGTPYEYEGPREESGIVEYMKKQSDPN-WKPPP 175
Query: 263 VKTLVAT--NFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXX--XXXXXX 430
V L T NF E+V + +LVEF+APWCGHCKQL P Y+K + +
Sbjct: 176 VAALTLTKENFTEVV-NRESLMLVEFFAPWCGHCKQLAPEYEKAAQELQKHDPPIPLAIV 234
Query: 431 XXXTANEL-EHTKITSFPTIKLYTKDNQVRDYHGERTLAGL 550
+EL + ++ +PT+K++ K + +Y G+R G+
Sbjct: 235 DATIESELAQKYEVQGYPTLKVFRK-GKATEYKGQRDQYGI 274
Score = 63.3 bits (147), Expect = 1e-10
Identities = 32/99 (32%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Frame = +2
Query: 263 VKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXX--XXXXXXXX 436
V L + NFD ++ + N +LVEFYAPWCGHCK L P Y K + +
Sbjct: 63 VSVLNSKNFDRVI-EENNIILVEFYAPWCGHCKSLAPEYAKAAKKMKLNDPPVPFAKMDA 121
Query: 437 XTANEL-EHTKITSFPTIKLYTKDNQVRDYHGERTLAGL 550
A+++ + ++ +PT+K++ K +Y G R +G+
Sbjct: 122 TVASDIAQRFDVSGYPTLKIFRKGTPY-EYEGPREESGI 159
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 69.7 bits (163), Expect = 1e-12
Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Frame = +2
Query: 272 LVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTAN- 448
L NFDE+V + K LVEFYAPWCGHCKQL P Y++LGE + +
Sbjct: 27 LTKDNFDEVV-NGEKFALVEFYAPWCGHCKQLAPTYEQLGEAYTQSSDVIIAKVDADGDR 85
Query: 449 EL-EHTKITSFPTIKLYTKDNQV-RDYHGERTL 541
+L + FPTIK + K + +Y+G R +
Sbjct: 86 DLGSRFDVKGFPTIKYFPKGSTTPEEYNGGRDI 118
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 60.1 bits (139), Expect = 1e-09
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Frame = +2
Query: 263 VKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXT 442
V L TNF++ V ++ LVEF+APWCGHC++L P + K +
Sbjct: 81 VVELTDTNFEKEVLNSKDLWLVEFFAPWCGHCQRLAPEWAKAATELKGKVKVGALDATVH 140
Query: 443 ANELEHTKITSFPTIKLYT----KDNQVRDYHGERTLAGL 550
++ +PTIK++ + V DY G RT + +
Sbjct: 141 TVTASRYQVQGYPTIKVFAAGIKNSHSVEDYQGGRTASDI 180
Score = 30.7 bits (66), Expect = 0.83
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +2
Query: 467 ITSFPTIKLY-TKDNQVRDYHGERTLAGL 550
I FPTIK++ N +DY+G+RT G+
Sbjct: 13 IRGFPTIKIFGANKNSPQDYNGQRTAQGI 41
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 56.8 bits (131), Expect = 1e-08
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = +2
Query: 263 VKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXT 442
VK L ++F + +T + VLV FYAPWCGHCK P Y+K E F+ T
Sbjct: 149 VKQLDGSDFWGYLNNT-EHVLVMFYAPWCGHCKNAKPKYEKAAETFKDQPNRVFAKLDCT 207
Query: 443 --ANELEHTKITSFPTIKLYTKDNQVRDYHGERTLAGL 550
+ + ++ +PT++ Y V +Y G+R L
Sbjct: 208 KFGDVCDKEEVNGYPTLRYYLYGKFVVEYDGDRVTEDL 245
Score = 52.4 bits (120), Expect = 2e-07
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Frame = +2
Query: 242 SDWAAKPVKTLVATN--FDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGE--HFEXX 409
SDW+ K + T+ DE + +++ VLV ++APWCGHC ++ P Y K + H E
Sbjct: 43 SDWSKDDSKVVFLTDESHDEFI-KSHENVLVMYFAPWCGHCNEMKPNYYKAAQVLHDEDA 101
Query: 410 XXXXXXXXXXTANEL-EHTKITSFPTIKLYTKDNQVR 517
++ + + +PT+KLY N +
Sbjct: 102 NCNLAAVDCTKHKDVAKKVALAGYPTVKLYKASNTAK 138
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 54.4 bits (125), Expect = 6e-08
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Frame = +2
Query: 242 SDWAAKPVKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXX 421
S +A V L A NFD+++ + + +LV+FYAPWC HC++L+P +
Sbjct: 15 SSGSANFVYDLNAQNFDQMIREKDI-MLVDFYAPWCHHCQELLPQLEGAANALAAKGLFQ 73
Query: 422 XXXXXXTANE----LEHTKITSFPTIKLYTKDNQVRDYHGERTLAGL 550
T ++ KI +P++KL+ DY G+RT A L
Sbjct: 74 FAKVDCTDPRSKVLCDNFKIEGYPSVKLFKFGKYAGDYIGQRTDAAL 120
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 51.2 bits (117), Expect = 5e-07
Identities = 26/75 (34%), Positives = 40/75 (53%)
Frame = +2
Query: 326 VEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANELEHTKITSFPTIKLYTKD 505
V+FYAPWC HC +L PI+++L E F+ ++ +KI +PT+ L+
Sbjct: 111 VKFYAPWCIHCIKLAPIWERLAEDFKDNA------------DITISKINGYPTLMLFKDG 158
Query: 506 NQVRDYHGERTLAGL 550
Q ++Y G R L L
Sbjct: 159 VQKKEYSGNRDLDSL 173
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 51.2 bits (117), Expect = 5e-07
Identities = 37/158 (23%), Positives = 74/158 (46%), Gaps = 5/158 (3%)
Frame = +2
Query: 38 DEDEHQRILEFFGMKKEEVPAARLIALEQDMAKYK-PTTDELSANAVEEFVQSFFAGTLK 214
D +E+ I E G++ A +I ++ A+Y + +++ +++ +FV L+
Sbjct: 440 DSEEYGIIAERLGVRWGADRVALVIVDVKNEAQYVFDESRQITNDSLVDFVMKSMTSKLE 499
Query: 215 QHLLSEDLPSDWAAKPVK--TLVATN-FDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDK 385
+ L ++ + T V T+ FD+IV + ++ VL+ FY PWCG C P+
Sbjct: 500 RRLRIPPPSGISCSREIVCVTEVTTDSFDDIVINNDQDVLLVFYTPWCGMCINFAPVLLA 559
Query: 386 LGEHFEXXXXXXXXXXXXTANELE-HTKITSFPTIKLY 496
+ F+ N+L + ++S+P+I L+
Sbjct: 560 VARFFQDISQVSVTRIDADQNDLPWNLTVSSYPSIILF 597
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 47.2 bits (107), Expect = 9e-06
Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 3/96 (3%)
Frame = +2
Query: 263 VKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXT 442
V + + NF V + +V+FYAPWCG C + P Y++L + +
Sbjct: 435 VSEVNSKNFFTDVLASEDAWVVDFYAPWCGPCMRFAPKYEQLAKMLKGKVRAAKVNCEQD 494
Query: 443 ANELEHTKITSFPTIKLY---TKDNQVRDYHGERTL 541
I S+PT++LY T+ + +G+ L
Sbjct: 495 YGLCSEANIHSYPTVRLYLGSTRQGMTQSINGDLQL 530
Score = 41.9 bits (94), Expect = 3e-04
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +2
Query: 263 VKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXT 442
V L +F V ++ V+F+APWC C +L+P Y K F
Sbjct: 286 VHALGPEDFPSSVTSPSRPFFVDFFAPWCPPCMRLLPEYRKAARSFVGKPVGFGTVDCTV 345
Query: 443 ANELEHT-KITSFPTIKLY 496
++L H I S+PT LY
Sbjct: 346 HSQLCHQYNIRSYPTTILY 364
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/46 (45%), Positives = 30/46 (65%)
Frame = +2
Query: 245 DWAAKPVKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYD 382
D A+ V L NF+E + N+ VLV+FYAPWC C++L P++D
Sbjct: 47 DPASPAVLNLNDQNFNETI-KKNEYVLVDFYAPWCSDCQRLSPLFD 91
Score = 44.4 bits (100), Expect = 6e-05
Identities = 22/53 (41%), Positives = 32/53 (60%)
Frame = +2
Query: 221 LLSEDLPSDWAAKPVKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIY 379
+ S+ +P D + L +NF+ V +K VLV+FYAPWC HCK++ P Y
Sbjct: 124 MASDGVPDD--EPTLLELDDSNFEPAV-QKHKFVLVDFYAPWCFHCKKMAPDY 173
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 45.6 bits (103), Expect = 3e-05
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +2
Query: 320 VLVEFYAPWCGHCKQLVPIYDKLGE 394
+LVEF+APWCGHCK+L P Y+ E
Sbjct: 33 MLVEFFAPWCGHCKRLAPEYETAAE 57
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 44.8 bits (101), Expect = 5e-05
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = +2
Query: 287 FDEIVFDTNKKVLVEFYAPWCGHCKQLVPIY 379
FD+ V N VLV FYAPWCGHCK + P Y
Sbjct: 92 FDDFVAK-NPSVLVMFYAPWCGHCKAMKPEY 121
Score = 43.2 bits (97), Expect = 1e-04
Identities = 23/53 (43%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +2
Query: 245 DWAAKP--VKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEH 397
+W+ P V L T F V K VLV FYAPWCGHCK+ P +H
Sbjct: 189 EWSEIPSEVYHLSDTTFKSFV-KKKKHVLVMFYAPWCGHCKKAKPELMSAAKH 240
>SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)
Length = 335
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +2
Query: 257 KPVKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHF 400
K + N DE V D +K V + FYAPW HC++++ I+D++ + F
Sbjct: 26 KKIVEFTNENVDEYV-DGSKFVFIFFYAPWDDHCQRILQIFDQVADEF 72
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 260 PVKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLV-PIY 379
P+ L +NF+ +V + K VLV +Y C C Q+ P Y
Sbjct: 145 PLIELEKSNFERVVKNRAKDVLVFYYNGNCKLCDQMAYPYY 185
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 41.5 bits (93), Expect = 4e-04
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +2
Query: 260 PVKTLVATNFDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDK 385
P+ L +FD + D + +LV+FYAPWC C L P Y+K
Sbjct: 23 PIFELTDQDFDNFLKD-KEVMLVDFYAPWCSDCDNLRPKYEK 63
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 39.9 bits (89), Expect = 0.001
Identities = 16/41 (39%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Frame = +2
Query: 287 FDEIVFDTNKK-VLVEFYAPWCGHCKQLVPIYDKLG-EHFE 403
F+ ++ +T K V+++FYA WCG C+Q+ P + K+ E F+
Sbjct: 21 FNSVINNTKDKLVVIDFYAEWCGPCRQIKPKFKKMALEEFK 61
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +2
Query: 314 KKVLVEFYAPWCGHCKQLVPIYDKLGEHFEXXXXXXXXXXXXTANELEHTK-ITSFPTIK 490
K V+ +F A WCG CK + P+Y L E ++ EL + +T+ PT +
Sbjct: 28 KLVVADFTASWCGPCKSIAPVYSGLSEKYK--QAVFLKIDVDVCQELAAKQGVTAMPTFQ 85
Query: 491 LYTKDNQVRDYHG 529
+ +V + G
Sbjct: 86 FFKNKVKVDEVRG 98
>SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05)
Length = 215
Score = 35.1 bits (77), Expect = 0.038
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 281 TNFDEIVFDT-NKKVLVEFYAPWCGHCKQLVPIYDKLGE 394
T+FD I+ + N +V F+APW HC Q+ + ++L +
Sbjct: 10 TDFDRILSSSSNVLAVVHFFAPWAPHCNQMNDVLEELAK 48
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 35.1 bits (77), Expect = 0.038
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 311 NKKVLVEFYAPWCGHCKQLVPIYDKLGEHF 400
++ V+++F A WCG CK + P++ L F
Sbjct: 28 SRLVVIDFTATWCGPCKSIAPVFTNLSMKF 57
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 34.7 bits (76), Expect = 0.051
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +2
Query: 287 FDEIVFDTNKKVLVEFYAPWCGHCKQLVPIYDKLGEHFE 403
FD+ + D N+ ++F A WCG C+ + P ++++ + F+
Sbjct: 4 FDKFLKD-NEVAAIDFTATWCGPCRMIGPKFEEMAKEFK 41
>SB_49486| Best HMM Match : MARVEL (HMM E-Value=1.6)
Length = 260
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = -1
Query: 160 KLIGGRFVLSHVLF-ESDQSCRWNFFLLHAEEL*DSLVFILVGV 32
+L+ G + L+ ++F E+D+ +W ++ H L SL FIL GV
Sbjct: 11 RLVIGIYCLAWMMFVETDEGYKWFLYINHWNFLALSLYFILAGV 54
>SB_32416| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0021)
Length = 358
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +1
Query: 418 HHRQDRRYGQRAGAHQDHVVP-DHQTV 495
HHR RR+ GAHQ+ P DH V
Sbjct: 177 HHRHYRRWHNSNGAHQEWAQPVDHHAV 203
>SB_18738| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 396
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 152 DELSANAVEEFVQSFFAGTLKQHLLSEDLPS 244
D++ N V F ++ FAG K+H++ D+ S
Sbjct: 61 DKVDENQVMRFRRNIFAGVKKRHIMEMDMNS 91
>SB_52464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2529
Score = 27.9 bits (59), Expect = 5.8
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -1
Query: 346 PGGVEF--NENLLVSVKDDLIEVGGD*SLDGFSSPVRGQVLAQQVLFQSSSEERLHEFLN 173
P G EF N ++ + DLI G + + SSP+ + + L +SSS E E L+
Sbjct: 2338 PQGQEFGLNRRVVEELSTDLIGKGTNTFISTTSSPLSRSISESKELSESSSFESESELLD 2397
Query: 172 S 170
S
Sbjct: 2398 S 2398
>SB_50316| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -3
Query: 215 VSEFQRRTIARIPQQR*R*AHRWSVCT*PCLVRERSVLP-LELLPSS 78
VSE + R + P QR R H + CT P ++ +P E++P S
Sbjct: 4 VSEKKLRVLGTSPSQRQRFLHMFLFCTGPEMITGPETIPGPEMIPKS 50
>SB_21263| Best HMM Match : Thioredoxin (HMM E-Value=0.00093)
Length = 148
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 4/30 (13%)
Frame = +2
Query: 314 KKVLVEFYAPWCGHCKQLVPI----YDKLG 391
K + V F A WC C+Q PI Y++LG
Sbjct: 26 KVIAVYFSAHWCPPCRQFTPILKDFYEELG 55
>SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1234
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = +2
Query: 32 DADEDEHQRILEFFGM---KKEEVP-AARLIALEQDMAKYKP 145
DAD +EHQ +E G+ EE P +A +I ++ D + KP
Sbjct: 679 DADTEEHQSPMELSGVDTNASEENPQSAEVIEIQPDQVQEKP 720
>SB_53535| Best HMM Match : zf-C2H2 (HMM E-Value=4.8e-32)
Length = 323
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Frame = +2
Query: 38 DEDEHQRILEFFGMKKEEVPA-----ARLIALEQDMAKYKPTTDELSANAVEEFVQS 193
DE + ++I++ G + +E + ARL L+ ++ K DE+ + + EF+++
Sbjct: 100 DERDEEKIIDVVGEETKETASGKAKNARLERLDDELEKMLQGNDEIISREIREFLEN 156
>SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2735
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -2
Query: 306 SKTISSKLVATKVLTGLAAQSEGRSSLNKCCFRVPAKN 193
+KT++ +L A + +Q EG S +N C FRVP N
Sbjct: 2530 TKTLTPELRARHRIEA-GSQIEGPSPVNTCGFRVPKMN 2566
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,336,292
Number of Sequences: 59808
Number of extensions: 281537
Number of successful extensions: 1180
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1172
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1276425465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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