Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_M19
         (553 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    22   3.6  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    22   3.6  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   6.3  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   8.3  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = +2

Query: 74  GMKKEEVPAARLIALEQDMAKYKPTTDELSANAVEEFVQS 193
           GMK+E V   R    E+D ++ + T+   S   +E  +++
Sbjct: 174 GMKREAVQEERQRTKERDQSEVESTSSLHSDMPIERILEA 213


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = +2

Query: 74  GMKKEEVPAARLIALEQDMAKYKPTTDELSANAVEEFVQS 193
           GMK+E V   R    E+D ++ + T+   S   +E  +++
Sbjct: 174 GMKREAVQEERQRTKERDQSEVESTSSLHSDMPIERILEA 213


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +3

Query: 111 SLSNKTWLSTNRPPMSLAL 167
           S +NKTWL  N    SL L
Sbjct: 437 SQTNKTWLPVNENYKSLNL 455


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 5/13 (38%), Positives = 8/13 (61%)
 Frame = -3

Query: 308 CQRRSHRSWWRLK 270
           CQ   ++ WW +K
Sbjct: 359 CQNEMNKWWWNMK 371


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,620
Number of Sequences: 438
Number of extensions: 2617
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)