Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_M18
         (497 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      24   1.0  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              22   3.1  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    22   3.1  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   4.1  
DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channe...    21   5.4  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    21   9.4  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    21   9.4  

>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 301 TLKSHKFSQYITVYNISLINLSHKSF 224
           TLK HK  Q+    N ++  L HK F
Sbjct: 386 TLKRHKEQQHFQPLNSAVCALCHKVF 411


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 74  HSVFLIISVFINYYNTYILSI 136
           HS+FLI+ +FI Y N  I  +
Sbjct: 11  HSIFLILIIFI-YSNETIAQV 30


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +2

Query: 74  HSVFLIISVFINYYNTYILSI 136
           HS+FLI+ +FI Y N  I  +
Sbjct: 11  HSIFLILIIFI-YSNETIAQV 30


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/33 (24%), Positives = 16/33 (48%)
 Frame = -3

Query: 483 KSMLRQFSKLNWINTRHDYLFNFKMGYTCRRTL 385
           K + ++   +N + T H+Y +    GY   + L
Sbjct: 752 KDLAKKARSVNHLLTHHEYDYELSRGYIDEKIL 784


>DQ667184-1|ABG75736.1|  489|Apis mellifera GABA-gated ion channel
           protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 391 YLGKKENAPHPKNLIQHGAS 332
           Y G K+N P   + I+ GAS
Sbjct: 430 YRGPKQNKPKVLHAIRRGAS 449


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +2

Query: 80  VFLIISVFINYYNTYILSIRF*TRRQCYKFST 175
           VF ++++ I+Y    +  +R      C  FST
Sbjct: 87  VFSVLTILISYIYILMAILRMSADGGCRNFST 118


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +1

Query: 172 NYTNGYVKALK 204
           +YTNG V+ALK
Sbjct: 177 SYTNGCVEALK 187


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,283
Number of Sequences: 438
Number of extensions: 2624
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)