Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_M17
         (550 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    76   2e-16
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   3.1  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   4.1  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   5.4  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   5.4  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    21   5.4  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   5.4  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 76.2 bits (179), Expect = 2e-16
 Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
 Frame = +1

Query: 49  KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQF 228
           K   L  + +     + +IF  T+R  D+L   + E++   +++HGD  Q ERE  +  F
Sbjct: 396 KRSKLVSILEKAPNERTLIFVETKRNADFLATFLSEQNIQSTSIHGDRYQSEREKALLDF 455

Query: 229 RTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENYXXXXXXXXXXXXXXXXXNFVTE 408
           +TG  +VL+ T + ARG+D++ V  VINYDLP + + Y                 +F  E
Sbjct: 456 KTGHRKVLVATGVAARGLDIKDVQHVINYDLPKSIDEYVHRIGRTGRVGNKGKATSFFDE 515

Query: 409 -ADRRALKDI 435
             DR    D+
Sbjct: 516 DQDRNLASDL 525


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 385 FLYGRNDHLFRFY 347
           F+ G N H FRFY
Sbjct: 515 FMIGLNSHGFRFY 527


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 252 HHHRPTGSRYRRAASLLCHQL 314
           H HRP  ++ RR A++   QL
Sbjct: 304 HDHRPALAQQRRVAAVQVPQL 324


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 231 YWFVSCAHHHRPTGSRYRRAAS 296
           Y +VS AHHH    +    AA+
Sbjct: 2   YPYVSAAHHHHQAAAAAFGAAA 23


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 231 YWFVSCAHHHRPTGSRYRRAAS 296
           Y +VS AHHH    +    AA+
Sbjct: 61  YPYVSAAHHHHQAAAAAFGAAA 82


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 231 YWFVSCAHHHRPTGSRYRRAAS 296
           Y +VS AHHH    +    AA+
Sbjct: 2   YPYVSAAHHHHQAAAAAFGAAA 23


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 231 YWFVSCAHHHRPTGSRYRRAAS 296
           Y +VS AHHH    +    AA+
Sbjct: 61  YPYVSAAHHHHQAAAAAFGAAA 82


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,358
Number of Sequences: 336
Number of extensions: 2381
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)