Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_M17
(550 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1006.07 |||translation initiation factor eIF4A|Schizosacchar... 228 4e-61
SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A related|Schizosa... 212 3e-56
SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyc... 103 2e-23
SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccha... 96 3e-21
SPAC17G6.14c |uap56||ATP-dependent RNA helicase Uap56|Schizosacc... 85 6e-18
SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase Su... 82 6e-17
SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar... 78 1e-15
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 76 3e-15
SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8 |Schizosaccha... 74 2e-14
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 64 2e-11
SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch... 63 2e-11
SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomy... 62 5e-11
SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosacch... 62 5e-11
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 58 6e-10
SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3 |Schizosaccha... 58 1e-09
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 55 6e-09
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 53 2e-08
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 53 2e-08
SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomy... 53 3e-08
SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyce... 52 4e-08
SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomy... 52 4e-08
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 50 3e-07
SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116 |S... 44 1e-05
SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomy... 43 3e-05
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 42 6e-05
SPCC1494.06c |||ATP-dependent RNA helicase Dbp9 |Schizosaccharom... 38 0.001
SPBC11C11.11c ||SPBC3B8.12|ATP-dependent DNA helicase Irc3 |Schi... 35 0.009
SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1 |Schizosaccharom... 33 0.028
SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase |Schizosa... 33 0.037
SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|ch... 32 0.048
SPBC1921.07c ||SPBC21D10.13|SAGA complex subunit Sgf29 |Schizosa... 27 2.4
SPBP18G5.02 |||CDP-diacylglycerol-glycerol-3-phosphate3-phosphat... 26 4.2
SPAC1786.01c ||SPAC31G5.20c|triacylglycerol lipase|Schizosacchar... 25 5.6
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 25 5.6
SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces pomb... 25 5.6
SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr 2... 25 5.6
SPBP8B7.22 |erd2||HDEL receptor|Schizosaccharomyces pombe|chr 2|... 25 7.3
SPBC16D10.04c |dna2||DNA replication endonuclease-helicase Dna2|... 25 9.7
SPCC1223.03c |gut2||glycerol-3-phosphate dehydrogenase Gut2|Schi... 25 9.7
SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2 |Schizosacch... 25 9.7
>SPAC1006.07 |||translation initiation factor
eIF4A|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 228 bits (558), Expect = 4e-61
Identities = 104/155 (67%), Positives = 123/155 (79%)
Frame = +1
Query: 1 LEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERDFTVSAM 180
LEGIKQFY+A+E EEWKL+TLCDLY+T+++ QAVIFCNTRRKVDWLTE + ERDFTVS+M
Sbjct: 229 LEGIKQFYVAVEKEEWKLDTLCDLYETVTVTQAVIFCNTRRKVDWLTEQLTERDFTVSSM 288
Query: 181 HGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENYXXXXXX 360
HGDMDQ +R+ +M +FRTGSSR+LITTDLLARGIDVQQVS VINYDLP NRENY
Sbjct: 289 HGDMDQAQRDTLMHEFRTGSSRILITTDLLARGIDVQQVSLVINYDLPANRENYIHRIGR 348
Query: 361 XXXXXXXXXXXNFVTEADRRALKDIEEFYHTSISE 465
NFVT D R +++IE+FY+T I E
Sbjct: 349 GGRFGRKGVSINFVTNDDVRMMREIEQFYNTHIEE 383
>SPAC1F5.10 |||ATP-dependent RNA helicase, eIF4A
related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 394
Score = 212 bits (517), Expect = 3e-56
Identities = 98/155 (63%), Positives = 117/155 (75%)
Frame = +1
Query: 1 LEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERDFTVSAM 180
LEG+KQ++IA+E EEWK +TLCDLYDTL+I QAVIFCN+RRKVDWLTE M E +FTV++M
Sbjct: 231 LEGLKQYFIAVEKEEWKFDTLCDLYDTLTITQAVIFCNSRRKVDWLTEKMREANFTVTSM 290
Query: 181 HGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENYXXXXXX 360
HG+M Q+ER+ IM+ FR G+SRVLI TD+ ARGIDVQQVS VINYDLP NRENY
Sbjct: 291 HGEMPQKERDAIMQDFRQGNSRVLICTDIWARGIDVQQVSLVINYDLPANRENYIHRIGR 350
Query: 361 XXXXXXXXXXXNFVTEADRRALKDIEEFYHTSISE 465
NFVT D R L+DIE++Y T I E
Sbjct: 351 SGRFGRKGVAINFVTNEDVRILRDIEQYYSTVIDE 385
>SPBC12C2.06 |||ATP-dependent RNA helicase Dbp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 503
Score = 103 bits (247), Expect = 2e-23
Identities = 46/111 (41%), Positives = 74/111 (66%)
Frame = +1
Query: 1 LEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERDFTVSAM 180
+EGIKQ Y+ + EE K L +LY L+I Q++IFC + + + M TV+ +
Sbjct: 323 VEGIKQLYMDCQSEEHKYNVLVELYGLLTIGQSIIFCKKKDTAEEIARRMTADGHTVACL 382
Query: 181 HGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNR 333
G+++ +R+ IM FR G+S+VL+TT+++ARGIDV QV+ V+NYD+P ++
Sbjct: 383 TGNLEGAQRDAIMDSFRVGTSKVLVTTNVIARGIDVSQVNLVVNYDMPLDQ 433
>SPBC776.09 |ste13||ATP-dependent RNA helicase
Ste13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 96.3 bits (229), Expect = 3e-21
Identities = 53/153 (34%), Positives = 77/153 (50%)
Frame = +1
Query: 1 LEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERDFTVSAM 180
L G+ Q+Y ++ E K+ L L+ L I Q++IFCN+ +V+ L + + E ++
Sbjct: 253 LRGVTQYYAFVD-ESQKVHCLNTLFSKLQINQSIIFCNSTNRVELLAKKITELGYSCFYS 311
Query: 181 HGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENYXXXXXX 360
H M Q R + FR G R L+ +DLL RGID+Q V+ VIN+D P N E Y
Sbjct: 312 HAKMLQSHRNRVFHNFRNGVCRNLVCSDLLTRGIDIQAVNVVINFDFPKNAETYLHRIGR 371
Query: 361 XXXXXXXXXXXNFVTEADRRALKDIEEFYHTSI 459
+F++ ADR L IE T I
Sbjct: 372 SGRFGHRGLAISFISWADRFNLYRIENELGTEI 404
>SPAC17G6.14c |uap56||ATP-dependent RNA helicase
Uap56|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 85.0 bits (201), Expect = 6e-18
Identities = 47/156 (30%), Positives = 80/156 (51%), Gaps = 1/156 (0%)
Frame = +1
Query: 1 LEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERDFTVSAM 180
L G++Q Y+ +E E+ K + DL D+L Q VIF + + + L + E +F +
Sbjct: 267 LHGLQQHYVKLE-EKAKNRKINDLLDSLEFNQVVIFVKSVSRANELDRLLRECNFPSICI 325
Query: 181 HGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENYXXXXXX 360
HG + Q ER + F+ R+ + TD+ RGID+++V+ VINYD+P + ++Y
Sbjct: 326 HGGLPQEERIKRYKAFKDFDKRICVATDVFGRGIDIERVNIVINYDMPDSPDSYLHRVGR 385
Query: 361 XXXXXXXXXXXNF-VTEADRRALKDIEEFYHTSISE 465
F +E D + L I+E + +I+E
Sbjct: 386 AGRFGTKGLAITFSSSEEDSQILDKIQERFEVNITE 421
>SPCC1795.11 |sum3|ded1, slh3, moc2|ATP-dependent RNA helicase
Sum3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 636
Score = 81.8 bits (193), Expect = 6e-17
Identities = 43/114 (37%), Positives = 68/114 (59%), Gaps = 1/114 (0%)
Frame = +1
Query: 4 EGIKQFYIAIELEEWKLETLCDLYDTLSI-AQAVIFCNTRRKVDWLTESMHERDFTVSAM 180
E I Q + +E E K L D+ TL +IF T+R D LT+ + +F +++
Sbjct: 402 ENITQKVVHVEDSE-KRSYLLDILHTLPPEGLTLIFVETKRMADTLTDYLLNSNFPATSI 460
Query: 181 HGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENY 342
HGD QRERE + FR+G + +++ T + +RG+D+ V+ VINYDLPT+ ++Y
Sbjct: 461 HGDRTQRERERALELFRSGRTSIMVATAVASRGLDIPNVTHVINYDLPTDIDDY 514
>SPBP8B7.16c |dbp2||ATP-dependent RNA helicase
Dbp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 77.8 bits (183), Expect = 1e-15
Identities = 33/83 (39%), Positives = 54/83 (65%)
Frame = +1
Query: 94 QAVIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 273
+ +IF T+R D +T + + + A+HGD Q ER+ ++ +FRTG S +++ TD+ +
Sbjct: 371 KVLIFTGTKRVADDITRFLRQDGWPALAIHGDKAQDERDWVLNEFRTGKSPIMVATDVAS 430
Query: 274 RGIDVQQVSCVINYDLPTNRENY 342
RGIDV+ ++ V NYD P N E+Y
Sbjct: 431 RGIDVKGITHVFNYDFPGNTEDY 453
>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
Prp11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1014
Score = 76.2 bits (179), Expect = 3e-15
Identities = 36/128 (28%), Positives = 64/128 (50%)
Frame = +1
Query: 52 LETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFR 231
LE L +LY+ + ++F + + D L + +R +T +++HG DQ +R+ + ++
Sbjct: 656 LELLGELYNNQLDVRTLVFVDRQESADALLSDLMKRGYTSNSIHGGKDQHDRDSTISDYK 715
Query: 232 TGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENYXXXXXXXXXXXXXXXXXNFVTEA 411
G VLI T ++ARG+DV+ + V+NYD P + E+Y F+T
Sbjct: 716 AGVFDVLIATSVVARGLDVKSLQLVVNYDCPNHMEDYVHRVGRTGRAGHTGVAVTFITPE 775
Query: 412 DRRALKDI 435
+ DI
Sbjct: 776 QEKYAVDI 783
>SPBC543.06c |dbp8||ATP-dependent RNA helicase Dbp8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 453
Score = 73.7 bits (173), Expect = 2e-14
Identities = 37/123 (30%), Positives = 64/123 (52%)
Frame = +1
Query: 97 AVIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLAR 276
A+IF N R + + + + V+ +H +M QRER + +FR ++++L+ TD+ +R
Sbjct: 261 AIIFVNRTRTAELIYSILRLLELRVTELHSEMVQRERINSLGRFRAEAAKILVATDVASR 320
Query: 277 GIDVQQVSCVINYDLPTNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIEEFYHTS 456
G+D+ V VIN+DLP + ++Y + VTE D + IE+ T
Sbjct: 321 GLDIPSVQLVINFDLPRDPDDYIHRVGRTARAGRSGESISIVTERDVDLVHAIEDRVGTK 380
Query: 457 ISE 465
+SE
Sbjct: 381 LSE 383
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 63.7 bits (148), Expect = 2e-11
Identities = 31/115 (26%), Positives = 59/115 (51%)
Frame = +1
Query: 100 VIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 279
++F T+ V++++E + + ++VS ++G +DQ R + FR G + +L+ TD+ +RG
Sbjct: 350 LVFVPTKHHVEYVSELLVQAGYSVSKIYGSLDQEARLNEINNFRLGKTNLLVVTDVASRG 409
Query: 280 IDVQQVSCVINYDLPTNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIEEF 444
ID+ ++ VINYD P + + + V D L D++ F
Sbjct: 410 IDIPLLANVINYDFPPQPKVFVHRVGRTARAGRTGWAYSLVRAEDAGYLLDLQLF 464
>SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 63.3 bits (147), Expect = 2e-11
Identities = 36/112 (32%), Positives = 51/112 (45%)
Frame = +1
Query: 94 QAVIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 273
+ VIF + L + + V +HG++ Q +RE + +FR G VLI TDLLA
Sbjct: 290 RVVIFVQDIERAKALYTELLFDEIHVGVIHGELPQAKREEALAKFRKGEIWVLIATDLLA 349
Query: 274 RGIDVQQVSCVINYDLPTNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALK 429
RGID V VIN+D P + +Y F T+ D +K
Sbjct: 350 RGIDFHGVKMVINFDFPQSVHSYIHRIGRTGRAGNTGQAVTFFTKEDGEYIK 401
>SPAC823.08c |||ATP-dependent RNA helicase Rrp3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 465
Score = 62.1 bits (144), Expect = 5e-11
Identities = 34/123 (27%), Positives = 54/123 (43%)
Frame = +1
Query: 70 LYDTLSIAQAVIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRV 249
L + L+ +IF T L + F+ +HG + Q R + +F++G+
Sbjct: 279 LVNELAGNSIIIFARTVNDTQRLAILLRTLGFSAIPLHGQLSQSNRLGALNKFKSGARST 338
Query: 250 LITTDLLARGIDVQQVSCVINYDLPTNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALK 429
L+ TD+ ARG+D+ V VINYD+PT+ + Y VT+ D
Sbjct: 339 LVATDVAARGLDIPLVDVVINYDIPTDSKAYIHRVGRTARAGRAGKSIALVTQYDLEPFL 398
Query: 430 DIE 438
IE
Sbjct: 399 RIE 401
>SPCC63.11 |prp28||U5 snRNP-associated protein Prp28
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 62.1 bits (144), Expect = 5e-11
Identities = 25/81 (30%), Positives = 48/81 (59%)
Frame = +1
Query: 100 VIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 279
+IF N +R ++ + + ++ + +HG Q +RE + Q R ++ +L+ TD+ RG
Sbjct: 520 IIFVNLKRNIEAIAKQLNAIGWHAVTLHGSKSQEQRERAIEQLRNKTADILVATDIAGRG 579
Query: 280 IDVQQVSCVINYDLPTNRENY 342
ID+ VS V+NY++ + E+Y
Sbjct: 580 IDIPNVSLVLNYNMAKSIEDY 600
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 58.4 bits (135), Expect = 6e-10
Identities = 26/86 (30%), Positives = 39/86 (45%)
Frame = +1
Query: 178 MHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENYXXXXX 357
+HG + Q +R + FR G L+ TD+ +RGID++ + VINY+ P E Y
Sbjct: 534 IHGSLSQEQRVRALEDFRDGKCNYLLATDVASRGIDIKGIEVVINYEAPATHEVYLHRVG 593
Query: 358 XXXXXXXXXXXXNFVTEADRRALKDI 435
E DR+ LK +
Sbjct: 594 RTARAGRSGRAITLAGEGDRKVLKGV 619
>SPBC17D1.06 |dbp3||ATP-dependent RNA helicase Dbp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 578
Score = 57.6 bits (133), Expect = 1e-09
Identities = 28/87 (32%), Positives = 40/87 (45%)
Frame = +1
Query: 157 RDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRE 336
R + V +HGDM Q R + F++G VL+ TD+ ARG+D+ +V VIN P E
Sbjct: 439 RKYNVVGIHGDMSQGARLQALNDFKSGKCPVLVATDVAARGLDIPKVQLVINVTFPLTIE 498
Query: 337 NYXXXXXXXXXXXXXXXXXNFVTEADR 417
+Y F T D+
Sbjct: 499 DYVHRIGRTGRANTKGTAITFFTPQDK 525
>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 55.2 bits (127), Expect = 6e-09
Identities = 28/114 (24%), Positives = 58/114 (50%)
Frame = +1
Query: 1 LEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERDFTVSAM 180
+EG++Q Y+ ++ ++ L L L + ++F ++ V ++ E ++ D V +
Sbjct: 308 VEGLEQGYVVVDSDKRFLLLFSFLKRNLK-KKVIVFMSSCASVKYMAELLNYIDLPVLDL 366
Query: 181 HGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENY 342
HG Q+ R +F +L+ T++ ARG+D+ V ++ YD P + +Y
Sbjct: 367 HGKQKQQRRTNTFFEFCNAEKGILLCTNVAARGLDIPAVDWIVQYDPPDDPRDY 420
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 53.2 bits (122), Expect = 2e-08
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Frame = +1
Query: 94 QAVIFCNTRRKVDWLTESMHERDF----TVSAMHGDMDQREREVIMRQFR--TGSSRVLI 255
+A+IFC T++ V+++ +H+ D V+ GD+ ER++ FR G +R++I
Sbjct: 1417 RAIIFCRTKKDVEYIHRRLHQSDLFAHTHVTIYTGDVSDEERQMNFDAFRNANGKTRIMI 1476
Query: 256 TTDLLARGIDVQQVSCVINYDLPTNRENY 342
T GI+ V V++Y LP + +Y
Sbjct: 1477 ATKAFGLGINYMGVRLVVHYGLPASSMDY 1505
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 53.2 bits (122), Expect = 2e-08
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Frame = +1
Query: 94 QAVIFCNTRRKVDWLTESMHERDF----TVSAMHGDMDQREREVIMRQFR--TGSSRVLI 255
+A+IFC T++ V+++ +H+ D V+ GD+ ER++ FR G +R++I
Sbjct: 1417 RAIIFCRTKKDVEYIHRRLHQSDLFAHTHVTIYTGDVSDEERQMNFDAFRNANGKTRIMI 1476
Query: 256 TTDLLARGIDVQQVSCVINYDLPTNRENY 342
T GI+ V V++Y LP + +Y
Sbjct: 1477 ATKAFGLGINYMGVRLVVHYGLPASSMDY 1505
>SPBC4F6.07c |||ATP-dependent RNA helicase Mak5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 648
Score = 52.8 bits (121), Expect = 3e-08
Identities = 24/83 (28%), Positives = 45/83 (54%)
Frame = +1
Query: 94 QAVIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 273
+ ++F N + +T ++E +H +DQ++R + +F+ VL+ TD+ A
Sbjct: 391 KTMVFANGIEDIKRITPFLNELKVPSYPLHAQLDQKKRLQSLEKFKNNPKGVLVCTDVAA 450
Query: 274 RGIDVQQVSCVINYDLPTNRENY 342
RGID+ V+ VI+Y +P + Y
Sbjct: 451 RGIDIPSVTHVIHYHVPHTADMY 473
>SPCC285.03 |||ATP-dependent RNA helicase Dbp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 604
Score = 52.4 bits (120), Expect = 4e-08
Identities = 26/74 (35%), Positives = 44/74 (59%)
Frame = +1
Query: 121 RKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVS 300
R ++ + ES+++ F+ + + ER+ I+ +F TG +L+ +DL+ARGIDV
Sbjct: 449 RLLELIHESLNQ-SFSCGLFTSSLSRDERKKIISRFATGDLNLLVCSDLMARGIDVANTQ 507
Query: 301 CVINYDLPTNRENY 342
VINYD P + +Y
Sbjct: 508 NVINYDPPLSVRSY 521
>SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 735
Score = 52.4 bits (120), Expect = 4e-08
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Frame = +1
Query: 10 IKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERDFTVSAMH-- 183
+ QFY+ + L E KL+ L T + ++F ++ ++V ++ E+ +S +H
Sbjct: 258 LNQFYLTVPLTE-KLDILFGFIRTHLKFKTIVFLSSCKQVRFVYETFRRMRPGISLLHLH 316
Query: 184 GDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENY 342
G Q R + +F + VL TD++ARG+D V VI D P + + Y
Sbjct: 317 GKQKQTTRTEVTAKFTSSRHVVLFCTDIVARGLDFPAVDWVIQLDAPEDVDTY 369
>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 606
Score = 49.6 bits (113), Expect = 3e-07
Identities = 25/102 (24%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Frame = +1
Query: 46 WKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESM--HERDFTVSAMHGDMDQREREVIM 219
+K++ + L T+ +A++F ++ V++ ++ F + A+HG Q R
Sbjct: 242 YKVQCMIHLLCTIEYEKAIVFFSSCASVEYFNSLFLTYKLPFEIVALHGQQVQSNRSRNF 301
Query: 220 RQFRTGSSR-VLITTDLLARGIDVQQVSCVINYDLPTNRENY 342
+F+ + + VL TTD+ +RG+D+ V V+ D P + +++
Sbjct: 302 EKFKKSNKKTVLFTTDIASRGLDIPNVDFVLQLDPPLDPKSF 343
>SPBC691.04 |||mitochondrial ATP-dependent RNA helicase Mss116
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 44.0 bits (99), Expect = 1e-05
Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 4/117 (3%)
Frame = +1
Query: 4 EGIKQFYIAIELEEW---KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHER-DFTV 171
E + QF I +L++ L L L + ++ ++F T VD++ +
Sbjct: 261 ERVPQFVIETKLDKVFSSSLSLLQQLTSSNPSSRIIVFLPTISMVDFVGGVLENHLKIPC 320
Query: 172 SAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENY 342
+H + +R I FR S +L TD++ARG+D ++ V+ P+N ++Y
Sbjct: 321 FILHSGLTTAQRRSITESFRKCQSGILFATDVVARGMDFPNITQVVQITGPSNTDDY 377
>SPBC21H7.04 |||ATP-dependent RNA helicase Dbp7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 709
Score = 43.2 bits (97), Expect = 3e-05
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +1
Query: 169 VSAMHGDMDQREREVIMRQFRTGS---SRVLITTDLLARGIDVQQVSCVINYDLPTNREN 339
V +HG + Q+ R + F + S +L+ TD+ ARG+D+ V V+ YD P + ++
Sbjct: 470 VYRLHGSLSQQIRTSTLNLFSSSEDSGSHILLCTDVAARGLDLPNVDLVVQYDAPFSTDD 529
Query: 340 Y 342
Y
Sbjct: 530 Y 530
>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1328
Score = 41.9 bits (94), Expect = 6e-05
Identities = 20/83 (24%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Frame = +1
Query: 100 VIFCNTRRKVDWLTESMHERDFTVSAMH--GDMDQREREVIMRQFRTGSSRVLITTDLLA 273
+I+C +R + + + D+ + A H +++ ER+ I ++++GS ++++ T
Sbjct: 746 IIYCLSRTSCEQVAAKLRN-DYGLKAWHYHAGLEKVERQRIQNEWQSGSYKIIVATIAFG 804
Query: 274 RGIDVQQVSCVINYDLPTNRENY 342
G+D V VI++ P + E Y
Sbjct: 805 MGVDKGDVRFVIHHSFPKSLEGY 827
>SPCC1494.06c |||ATP-dependent RNA helicase Dbp9
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 595
Score = 37.9 bits (84), Expect = 0.001
Identities = 12/25 (48%), Positives = 22/25 (88%)
Frame = +1
Query: 268 LARGIDVQQVSCVINYDLPTNRENY 342
+ARG+D + V+CV+N+D+P+N ++Y
Sbjct: 386 VARGLDFENVACVLNFDMPSNTKSY 410
>SPBC11C11.11c ||SPBC3B8.12|ATP-dependent DNA helicase Irc3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 606
Score = 34.7 bits (76), Expect = 0.009
Identities = 18/83 (21%), Positives = 37/83 (44%)
Frame = +1
Query: 91 AQAVIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLL 270
+ ++FC + + + A+ G+ + ERE +++ FR VL+ +L
Sbjct: 266 SSTLVFCINVEHSLKVCNAFRKLGIDARALFGETNDSERETLIQDFRKKKFPVLVNCMVL 325
Query: 271 ARGIDVQQVSCVINYDLPTNREN 339
G D+ + C++ PT+ N
Sbjct: 326 TEGTDIPNIDCLM-IARPTSSPN 347
>SPAC9.05 |mfh1||ATP-dependent DNA helicase Mfh1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 834
Score = 33.1 bits (72), Expect = 0.028
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 190 MDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 318
M Q+ + ++QF+ G LI T + G+D+ +V +I YD
Sbjct: 476 MSQKLQNETVKQFQKGEVNTLIATSIGEEGLDIGEVDMIICYD 518
>SPAC20H4.04 |mfh2||ATP-dependent 3' to 5' DNA helicase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 32.7 bits (71), Expect = 0.037
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +1
Query: 172 SAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 318
SA M+Q +++ + QFR G L+ T + G+D+ +I YD
Sbjct: 509 SAYSTGMNQMQQKETIDQFRAGVINTLVATSIGEEGLDIGDTDMIICYD 557
>SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1374
Score = 32.3 bits (70), Expect = 0.048
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 190 MDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDL 321
M R ++ + +F+TG VLI T + GIDV + VI +++
Sbjct: 407 MTFRRQKDTLHKFKTGKYNVLIATAVAEEGIDVPSCNLVIRFNI 450
>SPBC1921.07c ||SPBC21D10.13|SAGA complex subunit Sgf29
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 244
Score = 26.6 bits (56), Expect = 2.4
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -2
Query: 432 ILERSPVRFRDKVDGNSFTAETTTSSDSMNVVFAI 328
++ SP+ + G SFTA T T + M+V F +
Sbjct: 89 VITNSPLTRSRRNRGTSFTANTVTFTPGMSVAFKL 123
>SPBP18G5.02 |||CDP-diacylglycerol-glycerol-3-phosphate3-
phosphatidyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.8 bits (54), Expect = 4.2
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 71 YMTHSLLHRLLFSATPVVR*TG*PSLCMSATSPCRPCTVTWTS 199
+ TH L +L F P + + S+ +S+TSP P T+ W +
Sbjct: 190 FKTHFLFSQLSFECIPHLSDS---SIQLSSTSPVIPFTLKWNN 229
>SPAC1786.01c ||SPAC31G5.20c|triacylglycerol
lipase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 630
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +1
Query: 40 EEWKLETLCDLYDTLSIAQAVI--FCNTRRKVDW 135
+EWKL+ + D YD ++ QAV R + DW
Sbjct: 143 DEWKLDPVYDYYD-YTLVQAVYSSLVKHREQKDW 175
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transporter
Bfr1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1530
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 483 PTSSEVSTFIWSILCVLRSIA 545
PTS S WSI+C LR +A
Sbjct: 1050 PTSGLDSQSAWSIVCFLRKLA 1070
>SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 827
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +1
Query: 112 NTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRV 249
N ++ TES +R V + D + +R+ R+F G RV
Sbjct: 25 NNKKSRTRSTESHEDRQAKVQKIQSDFNLFDRQFTKRKFDVGGRRV 70
>SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 413
Score = 25.4 bits (53), Expect = 5.6
Identities = 15/56 (26%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1
Query: 148 MHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGID-VQQVSCVIN 312
+H++ V GD + + ++ + + TG +RV++TT L RG++ VQ + +++
Sbjct: 257 LHQKPHPVFERLGDDLKAKLKISLAEALTGFNRVILTT-LDGRGLEYVQPIGKILH 311
>SPBP8B7.22 |erd2||HDEL receptor|Schizosaccharomyces pombe|chr
2|||Manual
Length = 212
Score = 25.0 bits (52), Expect = 7.3
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Frame = +3
Query: 462 GKCPVM---WPTSSEVSTFIWSILCVLRSIAI 548
G C V+ +PTS +S +W+ L S+AI
Sbjct: 100 GGCAVLALIYPTSYTISNILWTFSIWLESVAI 131
>SPBC16D10.04c |dna2||DNA replication endonuclease-helicase
Dna2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1398
Score = 24.6 bits (51), Expect = 9.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 23 TLPLS*KNGNWKHCVIYMTHSLLHRLLFS 109
TLPL K G + + + SLL+ LL S
Sbjct: 593 TLPLELKTGRYVDNISHFAQSLLYTLLIS 621
>SPCC1223.03c |gut2||glycerol-3-phosphate dehydrogenase
Gut2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 649
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 225 VPYWFVSCAHHHRPTGSRYRRAASL 299
VPY+FV C + GS+ RA+++
Sbjct: 168 VPYFFVGCKIYDWVAGSKNLRASTI 192
>SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2176
Score = 24.6 bits (51), Expect = 9.7
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -2
Query: 462 RNTSVIELLNILERSPVRFRDKVD 391
R +EL +LER P+ R+++D
Sbjct: 1068 REEEKVELAKLLERVPIPIRERLD 1091
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,152,573
Number of Sequences: 5004
Number of extensions: 39050
Number of successful extensions: 123
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 120
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 227943826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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