Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_M17
(550 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 211 3e-55
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 192 1e-49
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 113 1e-25
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 99 3e-21
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 99 3e-21
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 88 5e-18
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 2e-14
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 6e-13
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 70 1e-12
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 69 3e-12
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 68 4e-12
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 68 4e-12
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 66 1e-11
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 65 3e-11
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 2e-09
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 59 3e-09
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 40 6e-09
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 1e-08
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 54 8e-08
SB_21307| Best HMM Match : Helicase_C (HMM E-Value=1.7e-11) 53 1e-07
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27) 50 1e-06
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 9e-06
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 45 4e-05
SB_58021| Best HMM Match : Helicase_C (HMM E-Value=0.017) 44 1e-04
SB_24297| Best HMM Match : Helicase_C (HMM E-Value=0.017) 44 1e-04
SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 1e-04
SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 1e-04
SB_56809| Best HMM Match : DEAD (HMM E-Value=2.6e-19) 42 3e-04
SB_23184| Best HMM Match : Helicase_C (HMM E-Value=7.8e-23) 42 4e-04
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05) 39 0.002
SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 39 0.003
SB_8614| Best HMM Match : Helicase_C (HMM E-Value=1.6e-18) 38 0.004
SB_30394| Best HMM Match : Helicase_C (HMM E-Value=1e-20) 37 0.012
SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32) 34 0.088
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 33 0.15
SB_23095| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62
SB_4445| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.82
SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21) 30 1.1
SB_31845| Best HMM Match : Arm (HMM E-Value=3.2e-13) 30 1.4
SB_32755| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_32528| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_47844| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_19957| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 211 bits (515), Expect = 3e-55
Identities = 98/155 (63%), Positives = 115/155 (74%)
Frame = +1
Query: 1 LEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERDFTVSAM 180
LEGIKQF++A+E EEWK +TLCDLYDTL+I QAVIFCNT+RKVDWLTE M E +FTV++M
Sbjct: 207 LEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVASM 266
Query: 181 HGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENYXXXXXX 360
HGDM Q+ERE IM+ FR G SRVLI+TD+ ARG+DVQQVS VINYDLP NRE Y
Sbjct: 267 HGDMPQKEREAIMKDFRAGQSRVLISTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGR 326
Query: 361 XXXXXXXXXXXNFVTEADRRALKDIEEFYHTSISE 465
NFV D R L+DIE++Y T I E
Sbjct: 327 SGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDE 361
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 192 bits (469), Expect = 1e-49
Identities = 86/114 (75%), Positives = 102/114 (89%)
Frame = +1
Query: 1 LEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERDFTVSAM 180
LEGIKQF++ +E E+WKL+TLCDLY+TL+I QAVIF NTRRKVDWL M E+D TVS+M
Sbjct: 301 LEGIKQFFVLVEKEDWKLDTLCDLYETLTITQAVIFANTRRKVDWLAAKMTEKDHTVSSM 360
Query: 181 HGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENY 342
HGDM Q+ER++IM++FR+GSSRVLITTDLLARGIDV QVS VINYDLP+NRENY
Sbjct: 361 HGDMSQKERDIIMKEFRSGSSRVLITTDLLARGIDVHQVSLVINYDLPSNRENY 414
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 113 bits (271), Expect = 1e-25
Identities = 49/112 (43%), Positives = 75/112 (66%)
Frame = +1
Query: 1 LEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERDFTVSAM 180
L+ IKQ+Y+ + E K E LC++Y LSI Q V+FC+TRR WL E M + V+ +
Sbjct: 315 LDNIKQYYVVCKNSEDKFEALCNMYGVLSIGQCVVFCHTRRNAAWLAEKMVKEGHAVALL 374
Query: 181 HGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRE 336
G++ +R ++ +FR G ++LITT++ ARGIDV+QV+ VINYD+P + +
Sbjct: 375 SGEITIEQRIAVLERFRLGKEKLLITTNVSARGIDVEQVTLVINYDMPMDMQ 426
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 98.7 bits (235), Expect = 3e-21
Identities = 54/153 (35%), Positives = 76/153 (49%)
Frame = +1
Query: 1 LEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERDFTVSAM 180
L G+ Q+Y +E E+ K+ L L+ L I Q++IFCN+ ++V+ L + E F+ +
Sbjct: 263 LHGVTQYYAFVE-EKQKVHCLNTLFQKLQINQSIIFCNSVQRVELLARKILELGFSCFYI 321
Query: 181 HGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENYXXXXXX 360
H M Q R + FR G R L+ +DL RGID+Q V+ VIN+D P N E Y
Sbjct: 322 HARMSQSHRNRVFHDFRQGHCRNLVCSDLFTRGIDIQSVNVVINFDFPKNSETYLHRIGR 381
Query: 361 XXXXXXXXXXXNFVTEADRRALKDIEEFYHTSI 459
N +T DR L IE T I
Sbjct: 382 SGRFGHLGVAINLITYDDRFDLYKIENELDTEI 414
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 98.7 bits (235), Expect = 3e-21
Identities = 54/153 (35%), Positives = 76/153 (49%)
Frame = +1
Query: 1 LEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERDFTVSAM 180
L G+ Q+Y +E E+ K+ L L+ L I Q++IFCN+ ++V+ L + E F+ +
Sbjct: 263 LHGVTQYYAFVE-EKQKVHCLNTLFQKLQINQSIIFCNSVQRVELLARKILELGFSCFYI 321
Query: 181 HGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENYXXXXXX 360
H M Q R + FR G R L+ +DL RGID+Q V+ VIN+D P N E Y
Sbjct: 322 HARMSQSHRNRVFHDFRQGHCRNLVCSDLFTRGIDIQSVNVVINFDFPKNSETYLHRIGR 381
Query: 361 XXXXXXXXXXXNFVTEADRRALKDIEEFYHTSI 459
N +T DR L IE T I
Sbjct: 382 SGRFGHLGVAINLITYDDRFDLYKIENELDTEI 414
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 87.8 bits (208), Expect = 5e-18
Identities = 44/156 (28%), Positives = 82/156 (52%), Gaps = 1/156 (0%)
Frame = +1
Query: 1 LEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERDFTVSAM 180
L G++Q+Y+ ++ E K L DL D L Q +IF + ++ L+ + +++F +
Sbjct: 307 LHGLQQYYVKLKDNE-KNRKLFDLLDLLEFNQVIIFVKSVQRCTALSHLLLKQNFPAICI 365
Query: 181 HGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENYXXXXXX 360
H M Q ER +QF+ R+L+ T+L RG+D+++V+ V NYD+P + + Y
Sbjct: 366 HRGMKQEERLARYQQFKNFEKRMLVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVAR 425
Query: 361 XXXXXXXXXXXNFVT-EADRRALKDIEEFYHTSISE 465
FV+ EAD + L ++++ + ++ E
Sbjct: 426 AGRFGTKGLAITFVSDEADAKTLNEVQDRFEVNVGE 461
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 76.2 bits (179), Expect = 2e-14
Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 1/155 (0%)
Frame = +1
Query: 4 EGIKQFYIAIELEEWKLETLCDLYDTLSIAQ-AVIFCNTRRKVDWLTESMHERDFTVSAM 180
E I Q + ++ E K L DL + Q ++F T++ D L + + + +++
Sbjct: 1072 ENITQKVVWVD-EFDKRSFLLDLLNASGPQQLTLVFVETKKGADALEMFLAKDGYYCTSI 1130
Query: 181 HGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENYXXXXXX 360
HGD QRERE +R FR G + +L+ T + ARG+D+ V VIN+DLPT+ E Y
Sbjct: 1131 HGDRSQREREEALRTFRCGDTPILVATAVAARGLDIPNVKHVINFDLPTDIEEYVHRIGR 1190
Query: 361 XXXXXXXXXXXNFVTEADRRALKDIEEFYHTSISE 465
+F ++ K++ + S E
Sbjct: 1191 TGRVGHTGLATSFFNHKNKNVAKELMDILEESKQE 1225
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 70.9 bits (166), Expect = 6e-13
Identities = 37/111 (33%), Positives = 61/111 (54%)
Frame = +1
Query: 10 IKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERDFTVSAMHGD 189
I+Q I + E K + L + + ++F ++R D+L + F +++HGD
Sbjct: 937 IEQTVIEVTDNE-KRDRLTQILGDAGTDRTLVFVESKRSADFLAIFLSGEGFPTTSIHGD 995
Query: 190 MDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENY 342
Q+ERE + FR G VLI T++ ARG+D+ V VIN+DLP++ + Y
Sbjct: 996 RLQQEREEALDDFRKGRCPVLIATNVAARGLDIDDVKHVINFDLPSDIDEY 1046
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 70.1 bits (164), Expect = 1e-12
Identities = 32/122 (26%), Positives = 63/122 (51%)
Frame = +1
Query: 100 VIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 279
++F +T + L H+ T +H + Q ER + +F++G+ ++L+ TD+ +RG
Sbjct: 251 IVFTHTCKNCQVLVSMFHKLGLTCVGLHSLLSQGERLAALARFKSGTIKILVATDVASRG 310
Query: 280 IDVQQVSCVINYDLPTNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIEEFYHTSI 459
+D+ QV V+N ++P + ++Y + VT+ D +K IEE +T +
Sbjct: 311 LDIPQVELVVNSNIPADPKDYIHRVGRTARAGRGGMAISMVTQYDIDRVKKIEEKINTKL 370
Query: 460 SE 465
+E
Sbjct: 371 TE 372
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 68.5 bits (160), Expect = 3e-12
Identities = 32/98 (32%), Positives = 55/98 (56%)
Frame = +1
Query: 49 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQF 228
K + L + T ++F ++ + VD++TE + + F S +H + Q R +++ F
Sbjct: 319 KPQKLLETLRTTPYPPVIVFTSSIQNVDYVTELLKQEQFHASGLHSEKPQDYRFKLVKAF 378
Query: 229 RTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENY 342
R G +L+ TD+ +RG+D +V+ VINYDLP E Y
Sbjct: 379 RDGKVDILVATDVASRGLDFPEVTHVINYDLPDTIECY 416
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 68.1 bits (159), Expect = 4e-12
Identities = 31/88 (35%), Positives = 51/88 (57%)
Frame = +1
Query: 79 TLSIAQAVIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLIT 258
+L + Q +IF + VD + E + + A+HGD Q ER +R+F G+ VL+
Sbjct: 84 SLDVIQVLIFAEKKSDVDDIHEYLLLKGVEAVAIHGDKSQEERVHAIREFHQGNKDVLVA 143
Query: 259 TDLLARGIDVQQVSCVINYDLPTNRENY 342
TD+ ++G+D + VIN+D+P + ENY
Sbjct: 144 TDVASKGLDFPDIQHVINFDMPEDIENY 171
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 68.1 bits (159), Expect = 4e-12
Identities = 31/88 (35%), Positives = 51/88 (57%)
Frame = +1
Query: 79 TLSIAQAVIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLIT 258
+L + Q +IF + VD + E + + A+HGD Q ER +R+F G+ VL+
Sbjct: 84 SLDVIQVLIFAEKKSDVDDIHEYLLLKGVEAVAIHGDKSQEERVHAIREFHQGNKDVLVA 143
Query: 259 TDLLARGIDVQQVSCVINYDLPTNRENY 342
TD+ ++G+D + VIN+D+P + ENY
Sbjct: 144 TDVASKGLDFPDIQHVINFDMPEDIENY 171
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 66.5 bits (155), Expect = 1e-11
Identities = 29/103 (28%), Positives = 54/103 (52%)
Frame = +1
Query: 148 MHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPT 327
++++ F + +HG +Q +RE + + GS +L+ TD+ RGID++ VS VINYD+
Sbjct: 304 VNQKKFRATTLHGGRNQEQREFALSSLKGGSKDILVATDVAGRGIDIKDVSHVINYDMAK 363
Query: 328 NRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIEEFYHTS 456
E+Y +F+T++D D+++ +S
Sbjct: 364 TIEDYTHRIGRTGRAGKTGIAVSFLTQSDSGVFYDLKQLLLSS 406
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 65.3 bits (152), Expect = 3e-11
Identities = 36/111 (32%), Positives = 56/111 (50%)
Frame = +1
Query: 10 IKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERDFTVSAMHGD 189
+ Q + + E KL + D+ +IF ++ + L + V +H D
Sbjct: 357 VDQELLFVGQESGKLLAVRDIVQKGFTPPVLIFVQSKDRAKELFHELIYDGINVDVIHSD 416
Query: 190 MDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENY 342
Q +R+ I++ FRTG VLI T+L+ RGID + V+ VINYD PT+ Y
Sbjct: 417 RTQAQRDNIVKSFRTGKIWVLIATELMGRGIDFKGVNLVINYDFPTSAVAY 467
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 59.3 bits (137), Expect = 2e-09
Identities = 25/78 (32%), Positives = 44/78 (56%)
Frame = +1
Query: 190 MDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENYXXXXXXXXX 369
++Q +RE + F+TG +R+LI TD+ +RG+D++ ++ VINYD P + E+Y
Sbjct: 76 LEQYDREQALDDFKTGLARILIATDVASRGLDIKDITYVINYDFPRHIEDYVHRVGRTGR 135
Query: 370 XXXXXXXXNFVTEADRRA 423
F++ D R+
Sbjct: 136 AGRSGTSLTFISREDWRS 153
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 58.8 bits (136), Expect = 3e-09
Identities = 26/83 (31%), Positives = 50/83 (60%)
Frame = +1
Query: 94 QAVIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 273
+ +IF T+++ + L + + T +HGD+ Q++REV ++ FR G R L+ TD+ A
Sbjct: 307 RTMIFAQTKKEANELALNSVLKQET-QVLHGDIPQKQREVTLKSFREGKFRCLVATDVAA 365
Query: 274 RGIDVQQVSCVINYDLPTNRENY 342
RG+D+ ++ V+ + P + + Y
Sbjct: 366 RGLDIPEIDLVVQCEPPKDVDAY 388
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 40.3 bits (90), Expect(2) = 6e-09
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +1
Query: 184 GDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENY 342
G+ R R +F+ ++ +L+ TD+ +RG+D VS VIN+D P + +Y
Sbjct: 728 GNSGTRIRCERFEKFQNKTADILVCTDIASRGLDTSDVSHVINFDFPNSMVDY 780
Score = 37.1 bits (82), Expect(2) = 6e-09
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +1
Query: 1 LEGIKQFYIAIELEEWKLETLCDLY--DTLSIAQAVIFCNTRRKVDWLTESMHERDFTVS 174
L ++ +I + E K E + +L D+ S Q ++FCN+ DWL + + + ++
Sbjct: 624 LPHVRHKFIKLNQHE-KAERIVELLKKDSKSPGQTIVFCNSASSCDWLARHLEQHNLSLI 682
Query: 175 AMHGDM 192
+HG++
Sbjct: 683 RLHGNI 688
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 56.4 bits (130), Expect = 1e-08
Identities = 31/114 (27%), Positives = 59/114 (51%)
Frame = +1
Query: 1 LEGIKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERDFTVSAM 180
+EG++Q YI + E+ L L S + ++F ++ V + +E ++ D V +
Sbjct: 790 VEGLEQGYIVVPSEKRFLVLFTFLKKNRS-KKVMVFFSSCNSVKYHSELLNYIDLPVLEI 848
Query: 181 HGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENY 342
HG Q++R +F S +L+ TD+ ARG+D+ +V ++ YD + + Y
Sbjct: 849 HGKQKQQKRTTTFFEFCNAKSGILLCTDVAARGLDIPEVDWIVQYDPADDPKEY 902
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 54.0 bits (124), Expect = 8e-08
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +1
Query: 184 GDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENYXXXXXXX 363
G Q +R M + ++ R+LI+TDL ARGID + V+ V+N D+P N E Y
Sbjct: 246 GSQTQAKRLEAMEKLKSFHCRILISTDLTARGIDAENVNLVVNMDVPHNGETYLHRIGRA 305
Query: 364 XXXXXXXXXXNFVTEA-DRRALKDIE 438
+V + R L+DIE
Sbjct: 306 GRFGTEGMAVTYVANGKEERELRDIE 331
>SB_21307| Best HMM Match : Helicase_C (HMM E-Value=1.7e-11)
Length = 87
Score = 53.2 bits (122), Expect = 1e-07
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +1
Query: 220 RQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENYXXXXXXXXXXXXXXXXXNF 399
+QF+ R+L+ T+L RG+D+++V+ V NYD+P + + Y F
Sbjct: 6 QQFKNFEKRMLVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITF 65
Query: 400 VT-EADRRALKDIEEFYHTSI 459
V+ EAD + L ++++ + ++
Sbjct: 66 VSDEADAKTLNEVQDRFEVNV 86
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 51.6 bits (118), Expect = 4e-07
Identities = 25/83 (30%), Positives = 45/83 (54%)
Frame = +1
Query: 94 QAVIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLA 273
+ ++F NT V LT + +H M QR+R + +F+ ++ +L+ TD+ A
Sbjct: 458 RTLVFANTIDCVRRLTSILRLVQLNPLPLHASMQQRQRLKNLDRFKASNTGLLLATDVAA 517
Query: 274 RGIDVQQVSCVINYDLPTNRENY 342
RG+D+ + VI+Y +P + E Y
Sbjct: 518 RGLDIANIEHVIHYQVPKDPEVY 540
>SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27)
Length = 331
Score = 50.0 bits (114), Expect = 1e-06
Identities = 30/109 (27%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Frame = +1
Query: 10 IKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHE--RDFTVSAMH 183
++ FY+ E K L + ++F +T V++ ++++ + + + A+H
Sbjct: 64 LQNFYLICRSHE-KFSQLVAFLKARKDKKNMVFFSTCACVNYFSKALTKFLPNVHIMALH 122
Query: 184 GDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTN 330
G M + R I FR S +L+ TD++ARG+D+ +V+ VI YD P++
Sbjct: 123 GKM-KSNRHKIFDSFRKLESGILVCTDVMARGVDIPEVNWVIQYDPPSS 170
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 47.2 bits (107), Expect = 9e-06
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = +1
Query: 82 LSIAQAVIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITT 261
+S +IF + + L ++ + DF V+ +HGDMDQ ER ++ QF+ +L+ T
Sbjct: 727 ISAGSVLIFVTKKLNSEELATNLRKNDFEVALLHGDMDQFERSKVLGQFKKREIPILVAT 786
Query: 262 DL 267
D+
Sbjct: 787 DV 788
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 45.2 bits (102), Expect = 4e-05
Identities = 24/101 (23%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Frame = +1
Query: 49 KLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMHERDFTVSAMHGDM---DQREREVIM 219
K + L +Y++ + A++F + VD + +A++ + D + +
Sbjct: 412 KAQVLAKIYESSNQKSALVFIHRNHSVDDFVWELRYLGLNAAALYKQVAIPDPTKYHKFL 471
Query: 220 RQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENY 342
R FRTG ++L+ T+ RG+D +++ V ++P N E Y
Sbjct: 472 RDFRTGQIQLLVGTEETVRGLDFKELDHVYLMEVPKNVEEY 512
>SB_58021| Best HMM Match : Helicase_C (HMM E-Value=0.017)
Length = 91
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/65 (36%), Positives = 28/65 (43%)
Frame = +1
Query: 265 LLARGIDVQQVSCVINYDLPTNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIEEF 444
L RGID+Q V+ VIN+D P N E Y N +T DR L IE
Sbjct: 2 LFTRGIDIQSVNVVINFDFPKNSETYLHRIGRSGRFGHLGVAINLITYDDRFDLYKIENE 61
Query: 445 YHTSI 459
T I
Sbjct: 62 LDTEI 66
>SB_24297| Best HMM Match : Helicase_C (HMM E-Value=0.017)
Length = 91
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/65 (36%), Positives = 28/65 (43%)
Frame = +1
Query: 265 LLARGIDVQQVSCVINYDLPTNRENYXXXXXXXXXXXXXXXXXNFVTEADRRALKDIEEF 444
L RGID+Q V+ VIN+D P N E Y N +T DR L IE
Sbjct: 2 LFTRGIDIQSVNVVINFDFPKNSETYLHRIGRSGRFGHLGVAINLITYDDRFDLYKIENE 61
Query: 445 YHTSI 459
T I
Sbjct: 62 LDTEI 66
>SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 845
Score = 43.2 bits (97), Expect = 1e-04
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +1
Query: 184 GDMDQREREVIMRQFRTGSS-RVLITTDLLARGIDVQQVSCVINYDLPTN 330
G M QRE+E ++ +FR GS ++I T + G+D+ S VI YD+ N
Sbjct: 597 GGMTQREQEEVIAKFRAGSECNIIIATTVAEEGLDIDDCSYVIRYDMMGN 646
>SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1258
Score = 43.2 bits (97), Expect = 1e-04
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Frame = +1
Query: 127 VDWLTESMH-ERDFTVSAMHGD------MDQREREVIMRQFRTGSSRVLITTDLLARGID 285
V+W+ ES + F A+ G M Q+E+E+I+ +F+ G +LI T + G+D
Sbjct: 954 VEWIKESEDLKHKFRPKALVGGGDGVVGMSQQEQELIIEEFKKGVVNILIATSVAEEGLD 1013
Query: 286 VQQVSCVINYD 318
++ S VI YD
Sbjct: 1014 IKDCSFVIRYD 1024
>SB_56809| Best HMM Match : DEAD (HMM E-Value=2.6e-19)
Length = 1463
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/43 (41%), Positives = 29/43 (67%)
Frame = +1
Query: 202 EREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTN 330
E+EVI++ FRTG ++LI+T +L G+DV + V+ +D N
Sbjct: 605 EQEVILKSFRTGRIKLLISTSVLEEGLDVPVCNLVVRFDSTMN 647
>SB_23184| Best HMM Match : Helicase_C (HMM E-Value=7.8e-23)
Length = 226
Score = 41.5 bits (93), Expect = 4e-04
Identities = 17/50 (34%), Positives = 32/50 (64%)
Frame = +1
Query: 169 VSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 318
V A+H +D E++++M +F G S+VLI+T ++ G+DV + ++ D
Sbjct: 95 VEALHSRLDSSEKDLVMDRFIKGESQVLISTTVIEVGVDVPNATMMVIMD 144
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 40.7 bits (91), Expect = 8e-04
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = +1
Query: 172 SAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLP 324
S ++ +DQ R + + +F+ + V++ TD+ ARGID+ + VIN+ P
Sbjct: 503 SYVYSSLDQTARTINVGKFQHKKTMVMVVTDVAARGIDIPMLDNVINFHFP 553
>SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05)
Length = 584
Score = 39.1 bits (87), Expect = 0.002
Identities = 15/40 (37%), Positives = 27/40 (67%)
Frame = +1
Query: 178 MHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQV 297
+HG++ Q +R +++F+ G +L+ TDL ARG+D+ V
Sbjct: 38 LHGNLTQLQRLEALQKFKNGEVDILVATDLAARGLDITGV 77
>SB_29752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1281
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/81 (20%), Positives = 35/81 (43%)
Frame = +1
Query: 100 VIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 279
+I+C TR + + + + H + +R+ + +++ G V+ T G
Sbjct: 252 IIYCRTRDACQEVASRLSRKGLSAKPYHAGLKSDKRDKVQQEWMEGKVAVICATISFGMG 311
Query: 280 IDVQQVSCVINYDLPTNRENY 342
+D V V ++ LP + E Y
Sbjct: 312 VDKGDVRFVAHWSLPQSMEGY 332
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +1
Query: 181 HGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENY 342
H M +R + ++F +G R + T G+D V +I+Y++P + E+Y
Sbjct: 819 HAGMSAAQRRKVQKRFMSGELRAVAATVAFGMGLDKSDVRAIIHYNMPKSFESY 872
>SB_8614| Best HMM Match : Helicase_C (HMM E-Value=1.6e-18)
Length = 282
Score = 38.3 bits (85), Expect = 0.004
Identities = 15/57 (26%), Positives = 31/57 (54%)
Frame = +1
Query: 172 SAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYDLPTNRENY 342
S+ M ++E +++ FR +L+ T ++ G+DV + + V+ +D P N +Y
Sbjct: 122 SSSDTQMGSTKQEKVLKMFRKHQINLLVATSVVEEGLDVPKCNFVVRFDFPQNFRSY 178
>SB_30394| Best HMM Match : Helicase_C (HMM E-Value=1e-20)
Length = 556
Score = 36.7 bits (81), Expect = 0.012
Identities = 27/117 (23%), Positives = 58/117 (49%), Gaps = 6/117 (5%)
Frame = +1
Query: 10 IKQFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKV----DWLTESMHERDFTVSA 177
IK+ +ELE + L + + + +I+C + + L+E++ ++ T +
Sbjct: 230 IKKVGRDVELENIFTTIIKKLSNGGQVEKTIIYCKSINACGDIYEVLSENVESKE-TYAM 288
Query: 178 MHGDM-DQREREVIMRQFRTGSS-RVLITTDLLARGIDVQQVSCVINYDLPTNRENY 342
H D ++EV+ ++ S RV++ T L G+D+ V +I++ +P+ E+Y
Sbjct: 289 FHSKTPDSIQKEVLGEFIKSNSKIRVVVATCALGMGVDIPDVDHIIHFGIPSEVEHY 345
>SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32)
Length = 651
Score = 33.9 bits (74), Expect = 0.088
Identities = 21/81 (25%), Positives = 34/81 (41%)
Frame = +1
Query: 100 VIFCNTRRKVDWLTESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARG 279
+I+C +R+ + + M R + H DM R S+V++ T G
Sbjct: 317 IIYCFSRKDAEQVAIEMSSRGIKAACYHADMPPESR-----------SQVVVATVAFGMG 365
Query: 280 IDVQQVSCVINYDLPTNRENY 342
ID V VI++ + ENY
Sbjct: 366 IDKSNVRFVIHHSFSKSMENY 386
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 33.1 bits (72), Expect = 0.15
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Frame = +1
Query: 16 QFYIAIELEEWKLETLCDLYDTLSIAQAVIFCNTRRKVDWLTESMH--ERDFTVSAMHGD 189
Q Y+ EL + KL L ++ ++F ++ ++V ++ E + + A++G
Sbjct: 250 QSYVVCELPD-KLNFLFSFIRNHLKSKILVFVSSCKQVKFIYEGFRRLQPGIPLMALYGK 308
Query: 190 MDQREREVIMRQFRTGSSRVLITTDLLARGI 282
Q +R I +F + VL TD+ ARG+
Sbjct: 309 QKQLKRVAIYDEFCKKTQCVLFATDIAARGL 339
>SB_23095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2722
Score = 31.1 bits (67), Expect = 0.62
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +1
Query: 169 VSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGIDV 288
V+ H + ER++I FR G+ RVL+ T L G+++
Sbjct: 557 VAFHHAGLTFDERDIIEGAFRQGTIRVLVATSTLCSGVNL 596
>SB_4445| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 30.7 bits (66), Expect = 0.82
Identities = 24/103 (23%), Positives = 38/103 (36%), Gaps = 2/103 (1%)
Frame = +1
Query: 112 NTRRKVDWLT--ESMHERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLITTDLLARGID 285
NT RK+ L + + + G + E+EVI Q + I +RG+D
Sbjct: 54 NTNRKLRVLVFANTAKHASKACAFLTGTEIKEEKEVIEAQLPLSYNSRTIKDGFASRGLD 113
Query: 286 VQQVSCVINYDLPTNRENYXXXXXXXXXXXXXXXXXNFVTEAD 414
+ V+ VI D T+ NF+T+ D
Sbjct: 114 IPNVTHVIQLDFATDAAQMLHRVGRTARAGSHGKVVNFITKDD 156
>SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21)
Length = 1728
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/43 (25%), Positives = 25/43 (58%)
Frame = +1
Query: 190 MDQREREVIMRQFRTGSSRVLITTDLLARGIDVQQVSCVINYD 318
+ Q+E+ ++ +FR G L++T + G+D+ V ++ +D
Sbjct: 564 LSQKEQLEVVHRFRMGGYNTLVSTCVGEEGLDIGDVDLIVCFD 606
>SB_31845| Best HMM Match : Arm (HMM E-Value=3.2e-13)
Length = 771
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = -3
Query: 275 RASRSVVMSTRDEPVRNCLMITSRSRWSMSPCMADTVKSR 156
+ S +V ST DEP+RN +MI+ +W + P M VKS+
Sbjct: 580 KESHTVKESTADEPLRNHVMIS--YQWDVQPTMIQ-VKSK 616
>SB_32755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 701
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = -3
Query: 287 TSIPRASRSVVMSTRDEPVRNCLMITSRSRWS--MSPCMADTVKSRSCIDSVSQSTLRRV 114
TS+P +SR V EP SRS+ PC+ DT S + D + + ++
Sbjct: 343 TSLPSSSRQDVYGHESEPESTAQDTQSRSKTGHPQEPCLGDTNSSSTKTDEQRTNLICKM 402
Query: 113 L 111
L
Sbjct: 403 L 403
>SB_32528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 154 ERDFTVSAMHGDMDQREREVIMRQFRTGSSRVLI 255
ERD T S ++GD+D R R+ G +R LI
Sbjct: 63 ERDTTQSTVNGDLDPRRRQEDAASRTIGCARTLI 96
>SB_47844| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 399
Score = 27.5 bits (58), Expect = 7.6
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = +1
Query: 142 ESMHERDFT--VSAMHGDMDQREREVIMRQF--RTGSSRVLITTDLLARGIDVQQVSCVI 309
E+MH + V +H ++ I+ F + G+ R+LI T G+D + V VI
Sbjct: 310 ENMHSTTGSPLVEMLHSCTPHANKQNILDSFSQQDGTVRLLIATIAFGMGVDCKGVKRVI 369
Query: 310 NYDLPTNRENY 342
+Y + E Y
Sbjct: 370 HYGPSKSVEAY 380
>SB_19957| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 27.5 bits (58), Expect = 7.6
Identities = 15/71 (21%), Positives = 31/71 (43%)
Frame = -2
Query: 399 KVDGNSFTAETTTSSDSMNVVFAISG*IIIDDTRDLLHVDTASQ*VGGDEHTRRTSTELP 220
K G + + +D++N++ + I++D + +V S GDE R + E+
Sbjct: 146 KCSGFTLVPNPSCPADTVNILLDVLREIVVDYMLHVRNVKATSSHRSGDEDIRASVAEVS 205
Query: 219 HDHLAFTLVHV 187
L+ L +
Sbjct: 206 EGRLSLALATI 216
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,882,100
Number of Sequences: 59808
Number of extensions: 335744
Number of successful extensions: 825
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 822
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1264269032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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