Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_M15
         (529 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_49621| Best HMM Match : 7tm_1 (HMM E-Value=6e-12)                   27   7.2  
SB_26631| Best HMM Match : ig (HMM E-Value=1.6e-22)                    27   7.2  
SB_22879| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.2  

>SB_49621| Best HMM Match : 7tm_1 (HMM E-Value=6e-12)
          Length = 316

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -3

Query: 317 VGIVGVIHILLFLFYNSIINSLCIVKNTV 231
           VG + + +ILLF     +I ++C+V NTV
Sbjct: 168 VGFLALNNILLFKVVGCVIITICLVLNTV 196


>SB_26631| Best HMM Match : ig (HMM E-Value=1.6e-22)
          Length = 1123

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 15/70 (21%), Positives = 30/70 (42%)
 Frame = +3

Query: 273 VKEEEQYVYYANYSNTFLYNNEEQRLTYLTEDIGFNSYYYYFHSHLPFWWSSERYGNLKH 452
           ++  +Q++  A +  TF+Y+  E+       D    +  Y  H  L FW   +   N++ 
Sbjct: 644 IENLKQFIVQARFVETFVYDMTEKPGKCAIRDRERKTISYNDHRFLVFWTDFQNTNNMRP 703

Query: 453 RRGEXYYQFL 482
           +     + FL
Sbjct: 704 KCTYPDFSFL 713


>SB_22879| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 80

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 14/52 (26%), Positives = 30/52 (57%)
 Frame = -3

Query: 317 VGIVGVIHILLFLFYNSIINSLCIVKNTVLHFSAINLK*SVHINEELWINFI 162
           + I+ +I+I++ +    IIN + I+ N +++   IN+   ++I   + IN I
Sbjct: 24  INIIIIINIIINIIIIIIINIIIIIINIIINIIIINIIIIINIIINIIINII 75


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,577,876
Number of Sequences: 59808
Number of extensions: 317970
Number of successful extensions: 773
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1197191618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)