Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_M14
         (528 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X67247-1|CAA47670.1|  208|Homo sapiens ribosomal protein S8 prot...   296   4e-80
BC070875-1|AAH70875.1|  208|Homo sapiens ribosomal protein S8 pr...   296   4e-80
AL592166-7|CAI13003.1|  208|Homo sapiens ribosomal protein S8 pr...   296   4e-80
AB062401-1|BAB93488.1|  208|Homo sapiens ribosomal protein S8 pr...   296   4e-80
AL592166-8|CAI13002.1|  188|Homo sapiens ribosomal protein S8 pr...   237   2e-62
BC005678-1|AAH05678.1|   80|Homo sapiens Similar to ribosomal pr...    58   1e-08

>X67247-1|CAA47670.1|  208|Homo sapiens ribosomal protein S8
           protein.
          Length = 208

 Score =  296 bits (726), Expect = 4e-80
 Identities = 135/176 (76%), Positives = 152/176 (86%)
 Frame = +1

Query: 1   GISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLD 180
           GISRD+WHKRR TGGKR P  KKRKYELGRPAANTK+GP+RIH VR RGGN KYRALRLD
Sbjct: 2   GISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLD 61

Query: 181 TGNFAWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPL 360
            GNF+WGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPL
Sbjct: 62  VGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPL 121

Query: 361 GRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQFHTGRVLACVAS 528
           GRKKGAKLT  EE I+NKKRS+K  KKY  R++ +K+   LEEQF  G++LAC+AS
Sbjct: 122 GRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIAS 177


>BC070875-1|AAH70875.1|  208|Homo sapiens ribosomal protein S8
           protein.
          Length = 208

 Score =  296 bits (726), Expect = 4e-80
 Identities = 135/176 (76%), Positives = 152/176 (86%)
 Frame = +1

Query: 1   GISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLD 180
           GISRD+WHKRR TGGKR P  KKRKYELGRPAANTK+GP+RIH VR RGGN KYRALRLD
Sbjct: 2   GISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLD 61

Query: 181 TGNFAWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPL 360
            GNF+WGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPL
Sbjct: 62  VGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPL 121

Query: 361 GRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQFHTGRVLACVAS 528
           GRKKGAKLT  EE I+NKKRS+K  KKY  R++ +K+   LEEQF  G++LAC+AS
Sbjct: 122 GRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIAS 177


>AL592166-7|CAI13003.1|  208|Homo sapiens ribosomal protein S8
           protein.
          Length = 208

 Score =  296 bits (726), Expect = 4e-80
 Identities = 135/176 (76%), Positives = 152/176 (86%)
 Frame = +1

Query: 1   GISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLD 180
           GISRD+WHKRR TGGKR P  KKRKYELGRPAANTK+GP+RIH VR RGGN KYRALRLD
Sbjct: 2   GISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLD 61

Query: 181 TGNFAWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPL 360
            GNF+WGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPL
Sbjct: 62  VGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPL 121

Query: 361 GRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQFHTGRVLACVAS 528
           GRKKGAKLT  EE I+NKKRS+K  KKY  R++ +K+   LEEQF  G++LAC+AS
Sbjct: 122 GRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIAS 177


>AB062401-1|BAB93488.1|  208|Homo sapiens ribosomal protein S8
           protein.
          Length = 208

 Score =  296 bits (726), Expect = 4e-80
 Identities = 135/176 (76%), Positives = 152/176 (86%)
 Frame = +1

Query: 1   GISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLD 180
           GISRD+WHKRR TGGKR P  KKRKYELGRPAANTK+GP+RIH VR RGGN KYRALRLD
Sbjct: 2   GISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLD 61

Query: 181 TGNFAWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPL 360
            GNF+WGSEC TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPL
Sbjct: 62  VGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPL 121

Query: 361 GRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQFHTGRVLACVAS 528
           GRKKGAKLT  EE I+NKKRS+K  KKY  R++ +K+   LEEQF  G++LAC+AS
Sbjct: 122 GRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIAS 177


>AL592166-8|CAI13002.1|  188|Homo sapiens ribosomal protein S8
           protein.
          Length = 188

 Score =  237 bits (579), Expect = 2e-62
 Identities = 119/176 (67%), Positives = 135/176 (76%)
 Frame = +1

Query: 1   GISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTKLGPQRIHLVRSRGGNTKYRALRLD 180
           GISRD+WHKRR TGGKR P  KKRKYELGRPAANTK+GP+RIH VR RGG          
Sbjct: 2   GISRDNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGG---------- 51

Query: 181 TGNFAWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYLLPL 360
                    C TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPL
Sbjct: 52  ---------C-TRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPL 101

Query: 361 GRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQFHTGRVLACVAS 528
           GRKKGAKLT  EE I+NKKRS+K  KKY  R++ +K+   LEEQF  G++LAC+AS
Sbjct: 102 GRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIAS 157


>BC005678-1|AAH05678.1|   80|Homo sapiens Similar to ribosomal
           protein S8 protein.
          Length = 80

 Score = 58.4 bits (135), Expect = 1e-08
 Identities = 27/49 (55%), Positives = 36/49 (73%)
 Frame = +1

Query: 382 LTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQFHTGRVLACVAS 528
           LT  EE I+NKKRS+K  KKY  R++ +K+   LEEQF  G++LAC+AS
Sbjct: 1   LTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIAS 49


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.317    0.132    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,078,458
Number of Sequences: 237096
Number of extensions: 2238466
Number of successful extensions: 4855
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4855
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5103531180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)