Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_M13
         (441 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   3.0  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    21   5.2  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   5.2  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    20   9.1  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 278 PDGISSSDHPF 310
           P G +SS+HPF
Sbjct: 360 PSGFTSSNHPF 370


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 9/31 (29%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = +3

Query: 141 DHILSIAELMPVQFRVYVK-HGGALDEGRHE 230
           +H+ SI  L P Q +++ + H       +HE
Sbjct: 71  EHLASIIRLTPTQVKIWFQNHRYKTKRAQHE 101


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 9/38 (23%), Positives = 19/38 (50%)
 Frame = +3

Query: 240 DGIR*WPEHVVGSRMVSLRVTIHSSLQRGSSSNTPYAP 353
           DG++ W ++    + + + +  +      S+SNT Y P
Sbjct: 247 DGLQLWVDYGCSPKKLIVGIPFYGRTFTLSNSNTNYNP 284


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = -1

Query: 150 GYDRPIALGVVVQLKQRCCDQFIVLWHRE 64
           GYD P ++ + VQ  +      +++W  E
Sbjct: 336 GYDNPKSIAIKVQYAKSLNLAGVMIWSIE 364


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,630
Number of Sequences: 336
Number of extensions: 2577
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9880622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)