BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_M13
(441 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-1644|ABI31246.1| 237|Drosophila melanogaster CG3689-PC... 128 3e-30
AY069791-1|AAL39936.1| 203|Drosophila melanogaster SD03330p pro... 40 0.002
AE014296-1645|AAF50278.2| 203|Drosophila melanogaster CG3689-PB... 40 0.002
AE014298-2923|AAF49012.1| 804|Drosophila melanogaster CG12531-P... 32 0.30
AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA... 30 1.6
AY122177-1|AAM52689.1| 946|Drosophila melanogaster LD35811p pro... 29 2.1
AE014134-3034|AAN11025.1| 946|Drosophila melanogaster CG10702-P... 29 2.1
AE014134-3033|AAN11024.1| 946|Drosophila melanogaster CG10702-P... 29 2.1
AE014134-3032|AAF53753.1| 946|Drosophila melanogaster CG10702-P... 29 2.1
X15469-1|CAA33496.1| 633|Drosophila melanogaster protein ( Dros... 28 4.9
M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chai... 28 4.9
M75882-1|AAA28661.1| 1951|Drosophila melanogaster laminin A chai... 28 4.9
L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A prot... 28 4.9
AE014296-1101|AAF50672.2| 3712|Drosophila melanogaster CG10236-P... 28 4.9
BT021957-1|AAX51662.1| 388|Drosophila melanogaster AT05371p pro... 28 6.5
AY069809-1|AAL39954.1| 855|Drosophila melanogaster SD04959p pro... 28 6.5
AF149047-1|AAF73149.1| 900|Drosophila melanogaster Su(z)12 prot... 28 6.5
AE014296-3247|AAF49094.2| 855|Drosophila melanogaster CG8013-PA... 28 6.5
AE014296-3246|AAN11641.1| 900|Drosophila melanogaster CG8013-PB... 28 6.5
AE014134-947|AAN10549.1| 388|Drosophila melanogaster CG14011-PC... 28 6.5
AE014134-946|AAN10548.1| 388|Drosophila melanogaster CG14011-PB... 28 6.5
AE014134-945|AAF52270.1| 388|Drosophila melanogaster CG14011-PA... 28 6.5
>AE014296-1644|ABI31246.1| 237|Drosophila melanogaster CG3689-PC,
isoform C protein.
Length = 237
Score = 128 bits (309), Expect = 3e-30
Identities = 57/64 (89%), Positives = 62/64 (96%)
Frame = +1
Query: 1 HITKPKEHKRLFLVQLQDRALFAVPKNYKLVAAPLFELYDNAQGYGPIISSLSQSLCRFN 180
HITKPKEHKRLFLVQL ++ALFAVPKNYKLVAAPLFELYDN+QGYGPIISSL Q+LCRFN
Sbjct: 174 HITKPKEHKRLFLVQLHEKALFAVPKNYKLVAAPLFELYDNSQGYGPIISSLPQALCRFN 233
Query: 181 FVYM 192
F+YM
Sbjct: 234 FIYM 237
>AY069791-1|AAL39936.1| 203|Drosophila melanogaster SD03330p
protein.
Length = 203
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1
Query: 1 HITKPKEHKRLFLVQLQDR 57
HITKPKEHKRLFLVQL ++
Sbjct: 174 HITKPKEHKRLFLVQLHEK 192
>AE014296-1645|AAF50278.2| 203|Drosophila melanogaster CG3689-PB,
isoform B protein.
Length = 203
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +1
Query: 1 HITKPKEHKRLFLVQLQDR 57
HITKPKEHKRLFLVQL ++
Sbjct: 174 HITKPKEHKRLFLVQLHEK 192
>AE014298-2923|AAF49012.1| 804|Drosophila melanogaster CG12531-PA
protein.
Length = 804
Score = 32.3 bits (70), Expect = 0.30
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = +3
Query: 96 STSV*VVRQRPGLWADHILSIAELMPVQFRVYVKHGGALDEGRH 227
ST V V+R +P H S+ EL+P Q R V HG A D H
Sbjct: 414 STCVLVLRYQP-----HSTSLVELLPAQLRTPVAHGTASDSRSH 452
>AE014296-3356|AAF51592.1| 2284|Drosophila melanogaster CG5847-PA
protein.
Length = 2284
Score = 29.9 bits (64), Expect = 1.6
Identities = 22/86 (25%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Frame = -3
Query: 277 EPTTCSGHHRIPSHRSSCLPSSNAPPCFTYTRN*TGISSAIERI*SAHSPGRCRTTQTEV 98
+P T + + R C P SN P C T I+++ + RCR +
Sbjct: 1306 QPATYLPPTTVTTVRPRCYPGSNDPGCQPPQTTKTPITTSKPVCYLGSTDSRCRQNPSTT 1365
Query: 97 LRPVYS--SLAPRTEPCPAIAPGTAS 26
+P S S P +P + P T S
Sbjct: 1366 QKPKCSVGSTDPECQPATYLPPTTVS 1391
>AY122177-1|AAM52689.1| 946|Drosophila melanogaster LD35811p
protein.
Length = 946
Score = 29.5 bits (63), Expect = 2.1
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 44 NCRTGLCSRCQRTINWSQHLC 106
NC T +CS C + WS H C
Sbjct: 173 NCSTPVCSGCSSSHCWSNHYC 193
>AE014134-3034|AAN11025.1| 946|Drosophila melanogaster CG10702-PC,
isoform C protein.
Length = 946
Score = 29.5 bits (63), Expect = 2.1
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 44 NCRTGLCSRCQRTINWSQHLC 106
NC T +CS C + WS H C
Sbjct: 173 NCSTPVCSGCSSSHCWSNHYC 193
>AE014134-3033|AAN11024.1| 946|Drosophila melanogaster CG10702-PB,
isoform B protein.
Length = 946
Score = 29.5 bits (63), Expect = 2.1
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 44 NCRTGLCSRCQRTINWSQHLC 106
NC T +CS C + WS H C
Sbjct: 173 NCSTPVCSGCSSSHCWSNHYC 193
>AE014134-3032|AAF53753.1| 946|Drosophila melanogaster CG10702-PA,
isoform A protein.
Length = 946
Score = 29.5 bits (63), Expect = 2.1
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 44 NCRTGLCSRCQRTINWSQHLC 106
NC T +CS C + WS H C
Sbjct: 173 NCSTPVCSGCSSSHCWSNHYC 193
>X15469-1|CAA33496.1| 633|Drosophila melanogaster protein (
Drosophila melanogasterDNA for complete foldback (FB)
transposable n. ).
Length = 633
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = -2
Query: 260 RPSSYSITPILVPSFVQRSTVFHIYTKLNRHKLCDREDM 144
RP+ Y + P L+P ++ F ++T + + KLC + D+
Sbjct: 579 RPNPYFL-PELMPPLIKLCKYFVLWTNVMKEKLCSKYDV 616
>M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chain
protein.
Length = 3712
Score = 28.3 bits (60), Expect = 4.9
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = +2
Query: 41 CNCRTGLCSRCQ 76
C+C TG+CS+CQ
Sbjct: 1818 CDCATGICSKCQ 1829
>M75882-1|AAA28661.1| 1951|Drosophila melanogaster laminin A chain
protein.
Length = 1951
Score = 28.3 bits (60), Expect = 4.9
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = +2
Query: 41 CNCRTGLCSRCQ 76
C+C TG+CS+CQ
Sbjct: 57 CDCATGICSKCQ 68
>L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A protein.
Length = 3712
Score = 28.3 bits (60), Expect = 4.9
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = +2
Query: 41 CNCRTGLCSRCQ 76
C+C TG+CS+CQ
Sbjct: 1818 CDCATGICSKCQ 1829
>AE014296-1101|AAF50672.2| 3712|Drosophila melanogaster CG10236-PA
protein.
Length = 3712
Score = 28.3 bits (60), Expect = 4.9
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = +2
Query: 41 CNCRTGLCSRCQ 76
C+C TG+CS+CQ
Sbjct: 1818 CDCATGICSKCQ 1829
>BT021957-1|AAX51662.1| 388|Drosophila melanogaster AT05371p
protein.
Length = 388
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = -3
Query: 322 LCSDEWMVTRRDTIREPTTCSGHHRIPSHRSSCLPSSNAPPCFTYTR 182
+CS E ++R D++ P H +PS R L SS P TYTR
Sbjct: 172 MCSWEEAMSRDDSMLAPLELPLSHSLPSLR---LGSSVGSPPLTYTR 215
>AY069809-1|AAL39954.1| 855|Drosophila melanogaster SD04959p
protein.
Length = 855
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 319 CSDEWMVTRRDTI-REPTTCSGHHRIPSHRSSCLP 218
C DE++ D I + + +GH+R+ H +CLP
Sbjct: 503 CLDEFLELDEDEISNQRSYITGHNRLYHHTETCLP 537
>AF149047-1|AAF73149.1| 900|Drosophila melanogaster Su(z)12
protein.
Length = 900
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 319 CSDEWMVTRRDTI-REPTTCSGHHRIPSHRSSCLP 218
C DE++ D I + + +GH+R+ H +CLP
Sbjct: 503 CLDEFLELDEDEISNQRSYITGHNRLYHHTETCLP 537
>AE014296-3247|AAF49094.2| 855|Drosophila melanogaster CG8013-PA,
isoform A protein.
Length = 855
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 319 CSDEWMVTRRDTI-REPTTCSGHHRIPSHRSSCLP 218
C DE++ D I + + +GH+R+ H +CLP
Sbjct: 503 CLDEFLELDEDEISNQRSYITGHNRLYHHTETCLP 537
>AE014296-3246|AAN11641.1| 900|Drosophila melanogaster CG8013-PB,
isoform B protein.
Length = 900
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = -3
Query: 319 CSDEWMVTRRDTI-REPTTCSGHHRIPSHRSSCLP 218
C DE++ D I + + +GH+R+ H +CLP
Sbjct: 503 CLDEFLELDEDEISNQRSYITGHNRLYHHTETCLP 537
>AE014134-947|AAN10549.1| 388|Drosophila melanogaster CG14011-PC,
isoform C protein.
Length = 388
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = -3
Query: 322 LCSDEWMVTRRDTIREPTTCSGHHRIPSHRSSCLPSSNAPPCFTYTR 182
+CS E ++R D++ P H +PS R L SS P TYTR
Sbjct: 172 MCSWEEAMSRDDSMLAPLELPLSHSLPSLR---LGSSVGSPPLTYTR 215
>AE014134-946|AAN10548.1| 388|Drosophila melanogaster CG14011-PB,
isoform B protein.
Length = 388
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = -3
Query: 322 LCSDEWMVTRRDTIREPTTCSGHHRIPSHRSSCLPSSNAPPCFTYTR 182
+CS E ++R D++ P H +PS R L SS P TYTR
Sbjct: 172 MCSWEEAMSRDDSMLAPLELPLSHSLPSLR---LGSSVGSPPLTYTR 215
>AE014134-945|AAF52270.1| 388|Drosophila melanogaster CG14011-PA,
isoform A protein.
Length = 388
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = -3
Query: 322 LCSDEWMVTRRDTIREPTTCSGHHRIPSHRSSCLPSSNAPPCFTYTR 182
+CS E ++R D++ P H +PS R L SS P TYTR
Sbjct: 172 MCSWEEAMSRDDSMLAPLELPLSHSLPSLR---LGSSVGSPPLTYTR 215
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,116,350
Number of Sequences: 53049
Number of extensions: 518859
Number of successful extensions: 1854
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1854
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1417837128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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