Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_M13
         (441 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   2.6  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    22   2.6  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   4.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   4.5  
S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    21   7.9  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +2

Query: 68  RCQRTINWSQHLCLSCTTTPRAMGRSY 148
           R + T  W ++  +    TP AMG  Y
Sbjct: 496 RAKTTRGWGEYTPVVYKKTPHAMGLDY 522


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +3

Query: 354 IGFSMPDYVSDY 389
           I FS PD VSDY
Sbjct: 387 IDFSFPDSVSDY 398


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -2

Query: 305 DGHSKRYHPGTNNMLRPSSYSITPILVPSFVQ 210
           DGH     PG   +LR  +  + P    +F Q
Sbjct: 68  DGHPVNDVPGVRRVLRNGTLVLLPFPAAAFRQ 99


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -2

Query: 305 DGHSKRYHPGTNNMLRPSSYSITPILVPSFVQ 210
           DGH     PG   +LR  +  + P    +F Q
Sbjct: 68  DGHPVNDVPGVRRVLRNGTLVLLPFPAAAFRQ 99


>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
          peptide protein.
          Length = 50

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -2

Query: 80 FFGTANRALSCNCTRN 33
          +F T   ++ CNC R+
Sbjct: 20 YFVTPTMSIKCNCKRH 35


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,685
Number of Sequences: 438
Number of extensions: 3386
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11450997
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)