Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_M10
         (91 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X79239-1|CAA55821.1|  151|Homo sapiens ribosomal protein S13 pro...    39   0.002
L01124-1|AAA60283.1|  151|Homo sapiens ribosomal protein S13 pro...    39   0.002
D88010-1|BAA13528.1|  151|Homo sapiens ribosomal protein S13 pro...    39   0.002
BC100032-1|AAI00033.1|  151|Homo sapiens ribosomal protein S13 p...    39   0.002
BC066322-1|AAH66322.1|  151|Homo sapiens ribosomal protein S13 p...    39   0.002
BC029732-1|AAH29732.1|  151|Homo sapiens ribosomal protein S13 p...    39   0.002
BC006772-1|AAH06772.1|  151|Homo sapiens ribosomal protein S13 p...    39   0.002
BC000475-1|AAH00475.1|  151|Homo sapiens ribosomal protein S13 p...    39   0.002

>X79239-1|CAA55821.1|  151|Homo sapiens ribosomal protein S13
          protein.
          Length = 151

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 16/17 (94%), Positives = 17/17 (100%)
 Frame = +3

Query: 39 MGRMHAPGKGISQSALP 89
          MGRMHAPGKG+SQSALP
Sbjct: 1  MGRMHAPGKGLSQSALP 17


>L01124-1|AAA60283.1|  151|Homo sapiens ribosomal protein S13
          protein.
          Length = 151

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 16/17 (94%), Positives = 17/17 (100%)
 Frame = +3

Query: 39 MGRMHAPGKGISQSALP 89
          MGRMHAPGKG+SQSALP
Sbjct: 1  MGRMHAPGKGLSQSALP 17


>D88010-1|BAA13528.1|  151|Homo sapiens ribosomal protein S13
          protein.
          Length = 151

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 16/17 (94%), Positives = 17/17 (100%)
 Frame = +3

Query: 39 MGRMHAPGKGISQSALP 89
          MGRMHAPGKG+SQSALP
Sbjct: 1  MGRMHAPGKGLSQSALP 17


>BC100032-1|AAI00033.1|  151|Homo sapiens ribosomal protein S13
          protein.
          Length = 151

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 16/17 (94%), Positives = 17/17 (100%)
 Frame = +3

Query: 39 MGRMHAPGKGISQSALP 89
          MGRMHAPGKG+SQSALP
Sbjct: 1  MGRMHAPGKGLSQSALP 17


>BC066322-1|AAH66322.1|  151|Homo sapiens ribosomal protein S13
          protein.
          Length = 151

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 16/17 (94%), Positives = 17/17 (100%)
 Frame = +3

Query: 39 MGRMHAPGKGISQSALP 89
          MGRMHAPGKG+SQSALP
Sbjct: 1  MGRMHAPGKGLSQSALP 17


>BC029732-1|AAH29732.1|  151|Homo sapiens ribosomal protein S13
          protein.
          Length = 151

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 16/17 (94%), Positives = 17/17 (100%)
 Frame = +3

Query: 39 MGRMHAPGKGISQSALP 89
          MGRMHAPGKG+SQSALP
Sbjct: 1  MGRMHAPGKGLSQSALP 17


>BC006772-1|AAH06772.1|  151|Homo sapiens ribosomal protein S13
          protein.
          Length = 151

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 16/17 (94%), Positives = 17/17 (100%)
 Frame = +3

Query: 39 MGRMHAPGKGISQSALP 89
          MGRMHAPGKG+SQSALP
Sbjct: 1  MGRMHAPGKGLSQSALP 17


>BC000475-1|AAH00475.1|  151|Homo sapiens ribosomal protein S13
          protein.
          Length = 151

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 16/17 (94%), Positives = 17/17 (100%)
 Frame = +3

Query: 39 MGRMHAPGKGISQSALP 89
          MGRMHAPGKG+SQSALP
Sbjct: 1  MGRMHAPGKGLSQSALP 17


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,654,877
Number of Sequences: 237096
Number of extensions: 165914
Number of successful extensions: 503
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 503
length of database: 76,859,062
effective HSP length: 11
effective length of database: 74,251,006
effective search space used: 1336518108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)