Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_M09
         (552 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_10928| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.1  
SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.3  
SB_2556| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   3.3  
SB_19631| Best HMM Match : zf-CCHC (HMM E-Value=0.0088)                29   3.3  
SB_21845| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.8  
SB_15869| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.8  
SB_607| Best HMM Match : No HMM Matches (HMM E-Value=.)                28   5.8  
SB_12341| Best HMM Match : Death (HMM E-Value=3.3e-08)                 28   5.8  
SB_15062| Best HMM Match : Tctex-1 (HMM E-Value=9.8e-19)               27   7.7  

>SB_10928| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 987

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
 Frame = +2

Query: 95   VFWKIMKRVMNSFVLFKNMLPSYTREELDFPGVKVERVVSEKMVTFMDEYDMDITNALYL 274
            V W    RV  +    K +  S+ R+E DFP + +E    E +VT +    + +TN L  
Sbjct: 817  VEWSCDNRVQLNADKCKELRISFARQERDFPPISIEGKEIE-VVTSVKLVRLTLTNNLTW 875

Query: 275  DQ--AEMQKKKSDMVY 316
            +    E+ KK S  +Y
Sbjct: 876  NDHVTEVTKKASKRLY 891


>SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3464

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 15/59 (25%), Positives = 32/59 (54%)
 Frame = +2

Query: 137 LFKNMLPSYTREELDFPGVKVERVVSEKMVTFMDEYDMDITNALYLDQAEMQKKKSDMV 313
           L ++ L   + E+ D   V+  RV+SE+    + + D+D  +++YL    + ++K+  V
Sbjct: 505 LSQHTLELSSEEDHDMDDVRNSRVLSEEARNILSDLDLDNNHSVYLGGLLVTEEKAPAV 563


>SB_2556| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 275

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 193 DTREIKFLASITRQHVFEKHERVHDAFHYLPE 98
           D+R  KF AS  R   FE H R+    HY P+
Sbjct: 2   DSRGSKFFASSFR--TFENHRRISSGRHYFPK 31


>SB_19631| Best HMM Match : zf-CCHC (HMM E-Value=0.0088)
          Length = 329

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 20  NQYNMDKYTYVPTALDMYTTCLRDPVFWKIM 112
           NQ NM ++  VPT  ++  TCL   +F  +M
Sbjct: 290 NQCNMSEHYRVPTRSEITKTCLEPNIFQNLM 320


>SB_21845| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 234

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 193 DTREIKFLASITRQHVFEKHERVHDAFHYLPE 98
           D+R  KFLA   R   FE H R+    HY P+
Sbjct: 2   DSRGSKFLAGSFR--TFENHRRISSDRHYFPK 31


>SB_15869| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1420

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 13/58 (22%), Positives = 30/58 (51%)
 Frame = +2

Query: 311  VYVARMRRLNHQPFKVSIDVMSDKAVDAVVRIFIGPKYDCMGRLMSINDKRLDMLEID 484
            V++A + + + +P   S   +  +    ++   IGP +  +GR + +++  LD +E D
Sbjct: 1097 VFIALLVKTSSEPLPKSGSSIVSRDTLMLLAREIGPAWKALGRALLLDNAELDQIEAD 1154


>SB_607| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 77

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -3

Query: 193 DTREIKFLASITRQHVFEKHERVHDAFHYLPE 98
           D+R  KF AS  R   FE H R+    HY P+
Sbjct: 2   DSRGSKFFASSFR--TFENHRRISSDRHYFPK 31


>SB_12341| Best HMM Match : Death (HMM E-Value=3.3e-08)
          Length = 194

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = +2

Query: 410 IGPKYDCMGRLMSINDKRLDMLEIDSFVYKLDTGK 514
           IG ++  +GR++ + D  LDM++ D    K  + K
Sbjct: 117 IGKRWKALGRVLRLKDSELDMIDEDESKLKEKSNK 151


>SB_15062| Best HMM Match : Tctex-1 (HMM E-Value=9.8e-19)
          Length = 851

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 23/95 (24%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
 Frame = +2

Query: 176  LDFPGVKVERVVSEKMVTFMDEYDMDITNALYLDQAEMQKKKSDMVYVARMRRLNHQPFK 355
            +DFP +KV ++V + +VT +D +  +  ++  L  A++  K+     +  +++LN + +K
Sbjct: 747  VDFPAIKVRQIVKDALVT-LDSHSYEPNDSALL--AKLMSKR----ILDEVKQLNVERYK 799

Query: 356  ----VSIDVMSDKAVDAVVRIFIGPKYD-CMGRLM 445
                VSI   + + +    R     +YD C+   M
Sbjct: 800  LVCLVSIGSKNRQGMRIASRCLWNTEYDTCISETM 834


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,295,338
Number of Sequences: 59808
Number of extensions: 318101
Number of successful extensions: 889
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1276425465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)