Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_M09
         (552 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK027491-1|BAB55151.1|  204|Homo sapiens protein ( Homo sapiens ...    37   0.054
BC014409-1|AAH14409.1|  204|Homo sapiens phosphopantothenoylcyst...    36   0.072
AY358848-1|AAQ89207.1|  204|Homo sapiens MDS018 protein.               36   0.072

>AK027491-1|BAB55151.1|  204|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14585 fis, clone NT2RM4001611, weakly similar to
           SIS2 PROTEIN. ).
          Length = 204

 Score = 36.7 bits (81), Expect = 0.054
 Identities = 21/61 (34%), Positives = 31/61 (50%)
 Frame = +2

Query: 152 LPSYTREELDFPGVKVERVVSEKMVTFMDEYDMDITNALYLDQAEMQKKKSDMVYVARMR 331
           LP    + LD PG++V  V +E+   F    D+ +T     D+ EM K +SD V    +R
Sbjct: 33  LPLLVSKLLDIPGLEVSVVTTERAKHFYSPQDIPVTLYSDADEWEMWKSRSDPVLHIDLR 92

Query: 332 R 334
           R
Sbjct: 93  R 93


>BC014409-1|AAH14409.1|  204|Homo sapiens
           phosphopantothenoylcysteine decarboxylase protein.
          Length = 204

 Score = 36.3 bits (80), Expect = 0.072
 Identities = 21/61 (34%), Positives = 31/61 (50%)
 Frame = +2

Query: 152 LPSYTREELDFPGVKVERVVSEKMVTFMDEYDMDITNALYLDQAEMQKKKSDMVYVARMR 331
           LP    + LD PG++V  V +E+   F    D+ +T     D+ EM K +SD V    +R
Sbjct: 33  LPLLVSKLLDIPGLEVAVVTTERAKHFYSPQDIPVTLYSDADEWEMWKSRSDPVLHIDLR 92

Query: 332 R 334
           R
Sbjct: 93  R 93


>AY358848-1|AAQ89207.1|  204|Homo sapiens MDS018 protein.
          Length = 204

 Score = 36.3 bits (80), Expect = 0.072
 Identities = 21/61 (34%), Positives = 31/61 (50%)
 Frame = +2

Query: 152 LPSYTREELDFPGVKVERVVSEKMVTFMDEYDMDITNALYLDQAEMQKKKSDMVYVARMR 331
           LP    + LD PG++V  V +E+   F    D+ +T     D+ EM K +SD V    +R
Sbjct: 33  LPLLVSKLLDIPGLEVAVVTTERAKHFYSPQDIPVTLYSDADEWEMWKSRSDPVLHIDLR 92

Query: 332 R 334
           R
Sbjct: 93  R 93


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,729,210
Number of Sequences: 237096
Number of extensions: 1420122
Number of successful extensions: 3142
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3142
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5477474182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)