Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_M09
         (552 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83216-2|CAB05673.1|  315|Caenorhabditis elegans Hypothetical pr...    31   0.42 
AF040657-1|AAB95054.1|  758|Caenorhabditis elegans Hypothetical ...    31   0.55 
Z50858-6|CAD44135.1|  949|Caenorhabditis elegans Hypothetical pr...    30   1.3  
AL021567-6|CAD44122.1|  949|Caenorhabditis elegans Hypothetical ...    30   1.3  
AL021567-2|CAD44121.1|  947|Caenorhabditis elegans Hypothetical ...    30   1.3  
AL021567-1|CAA16508.2|  898|Caenorhabditis elegans Hypothetical ...    30   1.3  
Z79694-7|CAB01964.1|  396|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z69637-4|CAA93469.1|  539|Caenorhabditis elegans Hypothetical pr...    29   2.9  
AC006832-4|AAF39996.1|  485|Caenorhabditis elegans Hypothetical ...    27   6.8  
Z75529-4|CAA99787.1|  232|Caenorhabditis elegans Hypothetical pr...    27   9.0  
Z72512-1|CAA96663.2|  326|Caenorhabditis elegans Hypothetical pr...    27   9.0  
U37430-4|AAB52675.1| 1616|Caenorhabditis elegans Vitellogenin st...    27   9.0  

>Z83216-2|CAB05673.1|  315|Caenorhabditis elegans Hypothetical
           protein C08F11.2 protein.
          Length = 315

 Score = 31.5 bits (68), Expect = 0.42
 Identities = 16/71 (22%), Positives = 30/71 (42%)
 Frame = +3

Query: 117 AS*TLSCFSKTCCLVILARNLISLVSKLNALYLKRWSPLWMNMTWISRMHFTWTRLRCKR 296
           +S + SC      L ++ R +I  + K   +++      W+   +IS  HF W  + C+ 
Sbjct: 110 SSMSFSCMISLQFLSVIQRLVILYLPKFKRVFMGYQLRFWIVGIYISTFHFGWIEINCRA 169

Query: 297 RSLIWSTLRVC 329
            +     L  C
Sbjct: 170 TNCKKENLAEC 180


>AF040657-1|AAB95054.1|  758|Caenorhabditis elegans Hypothetical
           protein T20H9.6 protein.
          Length = 758

 Score = 31.1 bits (67), Expect = 0.55
 Identities = 11/31 (35%), Positives = 22/31 (70%)
 Frame = +2

Query: 110 MKRVMNSFVLFKNMLPSYTREELDFPGVKVE 202
           ++ V+N  + FKN+LP+++   LD+ GV ++
Sbjct: 558 LRTVVNEVINFKNLLPAFSANLLDYGGVFIQ 588


>Z50858-6|CAD44135.1|  949|Caenorhabditis elegans Hypothetical
           protein F21A10.2c protein.
          Length = 949

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 15/53 (28%), Positives = 29/53 (54%)
 Frame = +2

Query: 233 MDEYDMDITNALYLDQAEMQKKKSDMVYVARMRRLNHQPFKVSIDVMSDKAVD 391
           + E  M I     ++++ ++K+K   +++   R L + P +V IDV S K V+
Sbjct: 805 LPELGMQIDERYCIEKSCVKKRKVYSLFIPMTRYLPNVPLEVQIDVPSSKVVN 857


>AL021567-6|CAD44122.1|  949|Caenorhabditis elegans Hypothetical
           protein F21A10.2c protein.
          Length = 949

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 15/53 (28%), Positives = 29/53 (54%)
 Frame = +2

Query: 233 MDEYDMDITNALYLDQAEMQKKKSDMVYVARMRRLNHQPFKVSIDVMSDKAVD 391
           + E  M I     ++++ ++K+K   +++   R L + P +V IDV S K V+
Sbjct: 805 LPELGMQIDERYCIEKSCVKKRKVYSLFIPMTRYLPNVPLEVQIDVPSSKVVN 857


>AL021567-2|CAD44121.1|  947|Caenorhabditis elegans Hypothetical
           protein F21A10.2b protein.
          Length = 947

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 15/53 (28%), Positives = 29/53 (54%)
 Frame = +2

Query: 233 MDEYDMDITNALYLDQAEMQKKKSDMVYVARMRRLNHQPFKVSIDVMSDKAVD 391
           + E  M I     ++++ ++K+K   +++   R L + P +V IDV S K V+
Sbjct: 803 LPELGMQIDERYCIEKSCVKKRKVYSLFIPMTRYLPNVPLEVQIDVPSSKVVN 855


>AL021567-1|CAA16508.2|  898|Caenorhabditis elegans Hypothetical
           protein F21A10.2a protein.
          Length = 898

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 15/53 (28%), Positives = 29/53 (54%)
 Frame = +2

Query: 233 MDEYDMDITNALYLDQAEMQKKKSDMVYVARMRRLNHQPFKVSIDVMSDKAVD 391
           + E  M I     ++++ ++K+K   +++   R L + P +V IDV S K V+
Sbjct: 754 LPELGMQIDERYCIEKSCVKKRKVYSLFIPMTRYLPNVPLEVQIDVPSSKVVN 806


>Z79694-7|CAB01964.1|  396|Caenorhabditis elegans Hypothetical
           protein C15A11.7 protein.
          Length = 396

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -3

Query: 124 HDAFHYLPEYW 92
           HD FHY PEYW
Sbjct: 75  HDFFHYYPEYW 85


>Z69637-4|CAA93469.1|  539|Caenorhabditis elegans Hypothetical
           protein F35G2.4 protein.
          Length = 539

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
 Frame = +2

Query: 47  YVPTALDMYTTCLRDPVFWKIMKRVM---NSFVLFKNMLPSYTREELDFPGVKVERVVSE 217
           +V   ++ Y    R    WK ++ +M    +    KN+  +  R E+ FPG +     + 
Sbjct: 74  FVTNPINAYLLIKRLTTEWKKVENIMLNNKASTFLKNITDNRVRSEVKFPGEEDLSGAAT 133

Query: 218 KMVTFMDEYDMD 253
            ++   D Y +D
Sbjct: 134 ALLRLQDTYSLD 145


>AC006832-4|AAF39996.1|  485|Caenorhabditis elegans Hypothetical
           protein ZK355.4 protein.
          Length = 485

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = -3

Query: 490 EAIDFEHVKAFVIDAHEAAHAIVFGTNKYTNDCVNSLI*HNI 365
           E +DF +  A+VI    A  AI+  +NKY  + + + + H I
Sbjct: 402 EGLDFLYKLAYVIAPDAARPAILIRSNKYLKNAILASLEHAI 443


>Z75529-4|CAA99787.1|  232|Caenorhabditis elegans Hypothetical
           protein C44H9.5 protein.
          Length = 232

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = +2

Query: 407 FIGPKY-DCMGRLMSINDKRLD 469
           F  PKY DC G+L S+ D +LD
Sbjct: 53  FCVPKYEDCFGQLRSVEDCKLD 74


>Z72512-1|CAA96663.2|  326|Caenorhabditis elegans Hypothetical
           protein R07B5.3 protein.
          Length = 326

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +2

Query: 68  MYTTCLRDPVFWKIMKRVMNSFVLFKNMLPSYTREELDFP 187
           +Y  C+   VFW     V++S   F N+       +LDFP
Sbjct: 145 IYQLCILFLVFWGPATYVLSSVSAFPNITSKVVCMQLDFP 184


>U37430-4|AAB52675.1| 1616|Caenorhabditis elegans Vitellogenin
            structural genes (yolk protein genes) protein 1 protein.
          Length = 1616

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 12/49 (24%), Positives = 25/49 (51%)
 Frame = +2

Query: 200  ERVVSEKMVTFMDEYDMDITNALYLDQAEMQKKKSDMVYVARMRRLNHQ 346
            ER    +  +F + YD +  N     + +  +KKSD+V   +++  +H+
Sbjct: 1496 ERKYESEEYSFEETYDYEQENTNKKQKNQRSQKKSDLVEKTQIKEFSHR 1544


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,956,747
Number of Sequences: 27780
Number of extensions: 236113
Number of successful extensions: 745
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)