Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_M08
         (414 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical p...    88   2e-18
AF022981-4|AAG24205.1|  602|Caenorhabditis elegans Hypothetical ...    33   0.082
U58738-6|AAB00606.1|  118|Caenorhabditis elegans Hypothetical pr...    27   5.4  
U97194-6|AAB52451.2|  244|Caenorhabditis elegans Hypothetical pr...    27   7.1  
U64836-5|AAG24057.1|  119|Caenorhabditis elegans Hypothetical pr...    27   7.1  
L23649-3|AAA27909.2|  601|Caenorhabditis elegans Tyrosinase prot...    27   7.1  
Z82265-1|CAB05172.1|  116|Caenorhabditis elegans Hypothetical pr...    26   9.4  
Z81044-5|CAE17706.2|  460|Caenorhabditis elegans Hypothetical pr...    26   9.4  
Z69637-4|CAA93469.1|  539|Caenorhabditis elegans Hypothetical pr...    26   9.4  
U55364-1|AAA97970.2|  226|Caenorhabditis elegans Hypothetical pr...    26   9.4  
U46673-3|AAC48151.1|  506|Caenorhabditis elegans Aldehyde dehydr...    26   9.4  
AL110479-1|CAB60310.2|  311|Caenorhabditis elegans Hypothetical ...    26   9.4  
AC024804-6|AAF60746.1|  162|Caenorhabditis elegans Hypothetical ...    26   9.4  

>U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical
           protein F13H8.7 protein.
          Length = 387

 Score = 88.2 bits (209), Expect = 2e-18
 Identities = 46/125 (36%), Positives = 66/125 (52%)
 Frame = +3

Query: 33  LEAIVNNNLSGKDLEEFNRIYYGRKDHFEIKLKDTSXXXXXXXXXXXXXXXFPAKKEQTR 212
           +E  +   L G  L+E  RI YGR  +  +++   +                 A+KEQTR
Sbjct: 11  VETALAEKLDGVSLDEVERILYGRP-YRALEISSIAEKLAQDGDFQLSGYIVDAQKEQTR 69

Query: 213 PPRIVKVGIIQHSIAIPTDRPINEQKKAIFDKVKKIIDVAGQEGVHIICFQELWNMPFAF 392
            PR+V+V  IQ+ I  PT   + EQ+ AI  +V  +I+ A   G ++I  QE W MPFAF
Sbjct: 70  APRLVRVAAIQNKIHRPTTDSVVEQRDAIHQRVGAMIEAAASAGANVIGLQEAWTMPFAF 129

Query: 393 CTREK 407
           CTRE+
Sbjct: 130 CTRER 134


>AF022981-4|AAG24205.1|  602|Caenorhabditis elegans Hypothetical
           protein W03F9.10 protein.
          Length = 602

 Score = 33.1 bits (72), Expect = 0.082
 Identities = 25/89 (28%), Positives = 35/89 (39%)
 Frame = +3

Query: 48  NNNLSGKDLEEFNRIYYGRKDHFEIKLKDTSXXXXXXXXXXXXXXXFPAKKEQTRPPRIV 227
           N NLS K+L+E  R     K     K K++                 P K+E+      V
Sbjct: 14  NKNLSKKELQELKR-----KQQKSKKKKESKKRAKATKQAEIETREEPKKEEENGDDLDV 68

Query: 228 KVGIIQHSIAIPTDRPINEQKKAIFDKVK 314
           ++  I  +I I  D P  +   AIFD  K
Sbjct: 69  EIDYIGETIEIEPDNPHAQYFSAIFDAFK 97


>U58738-6|AAB00606.1|  118|Caenorhabditis elegans Hypothetical
           protein F31A9.1 protein.
          Length = 118

 Score = 27.1 bits (57), Expect = 5.4
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = +2

Query: 293 SNFR*GKKDNRCRRSRGSSYN 355
           SN+R  K+D+RC RSR  +YN
Sbjct: 60  SNYR-QKEDSRCMRSRHDTYN 79


>U97194-6|AAB52451.2|  244|Caenorhabditis elegans Hypothetical
           protein C37A2.6 protein.
          Length = 244

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -3

Query: 133 SFNLISKWSFRP**ILLNSSRSLPLKL-LLTIASRLWVS 20
           S N  +KW  R   I+ N S +  + L L+TIAS LW+S
Sbjct: 5   SLNAAAKWMIRNT-IVSNESLTPEINLHLITIASPLWMS 42


>U64836-5|AAG24057.1|  119|Caenorhabditis elegans Hypothetical
           protein F10G2.2 protein.
          Length = 119

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +3

Query: 312 KKIID-VAGQEGVHIICFQELWNMPFAFCTREKQ 410
           +++ID   G+EG+  +CF    N P  F   E Q
Sbjct: 78  EQVIDNTLGEEGILCLCFTNFCNTPITFDEFESQ 111


>L23649-3|AAA27909.2|  601|Caenorhabditis elegans Tyrosinase protein
           1 protein.
          Length = 601

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +2

Query: 44  RQQQLKWQRPRGVQQDLLWTERPFRNQIKRYINCR 148
           +QQQ + QRP    Q   + E P  NQ  R   CR
Sbjct: 463 QQQQPQQQRPATTPQSNCYNEDPCCNQWSRQNECR 497


>Z82265-1|CAB05172.1|  116|Caenorhabditis elegans Hypothetical
           protein F02H6.3a protein.
          Length = 116

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
 Frame = -1

Query: 63  HLSCC*RSLQGFGFRGP--CLL 4
           +L CC RSL+   FRGP  CL+
Sbjct: 92  YLKCCLRSLKKIKFRGPLNCLV 113


>Z81044-5|CAE17706.2|  460|Caenorhabditis elegans Hypothetical
           protein C30H6.11 protein.
          Length = 460

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +1

Query: 10  TWTTKPKALKRSSTTT*VAKTSRSSTGFIMDGKTIS 117
           T TT P      +TTT  AKT++S+T      KT S
Sbjct: 275 TPTTTPTTTTTPTTTTTTAKTTKSTTTTTKTTKTTS 310


>Z69637-4|CAA93469.1|  539|Caenorhabditis elegans Hypothetical
           protein F35G2.4 protein.
          Length = 539

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +3

Query: 45  VNNNLSGKDLEEFNRIYYGRKDHF 116
           V+N LSG D  E  R  Y +KD++
Sbjct: 159 VSNKLSGHDTFEVGRSAYNQKDYY 182


>U55364-1|AAA97970.2|  226|Caenorhabditis elegans Hypothetical
           protein F21C10.10 protein.
          Length = 226

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +3

Query: 18  HETQSLEAIVNNNLSGKDLEEFNRI 92
           HET++ +   N+ +S K LEE N++
Sbjct: 142 HETKTAKMFTNSKVSKKTLEEVNQL 166


>U46673-3|AAC48151.1|  506|Caenorhabditis elegans Aldehyde
           dehydrogenase protein 10 protein.
          Length = 506

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +3

Query: 291 KAIFDKVKKIIDVAGQEGVHIIC 359
           K  ++KVK  I++A +EG  I+C
Sbjct: 350 KVHYEKVKSYIELAKKEGADILC 372


>AL110479-1|CAB60310.2|  311|Caenorhabditis elegans Hypothetical
           protein Y105C5B.1 protein.
          Length = 311

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +3

Query: 297 IFDKVKKIIDVAGQEGVHIICFQELWNMPF 386
           I+ + +K  +  G E VH   F+EL+N+ F
Sbjct: 50  IYKRPRKPENPGGSENVHAPIFRELYNLSF 79


>AC024804-6|AAF60746.1|  162|Caenorhabditis elegans Hypothetical
           protein Y51H7BR.3 protein.
          Length = 162

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -3

Query: 91  ILLNSSRSLPLKLLLTIASRLWVSWSMFA 5
           I  NS + LP+ LLL   +  W   S+FA
Sbjct: 68  IFFNSKKKLPILLLLLTITLFWFISSIFA 96


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,800,322
Number of Sequences: 27780
Number of extensions: 193456
Number of successful extensions: 508
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 508
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 673122114
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)