Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_M08
(414 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g64370.1 68418.m08086 beta-ureidopropionase, putative / beta-... 116 5e-27
At5g12040.2 68418.m01407 carbon-nitrogen hydrolase family protei... 31 0.23
At5g12040.1 68418.m01408 carbon-nitrogen hydrolase family protei... 31 0.23
At5g53130.1 68418.m06604 cyclic nucleotide-regulated ion channel... 31 0.31
At1g01340.1 68414.m00049 cyclic nucleotide-regulated ion channel... 29 0.94
At4g01010.1 68417.m00136 cyclic nucleotide-regulated ion channel... 29 1.2
At2g46430.1 68415.m05778 cyclic nucleotide-regulated ion channel... 29 1.2
At3g45850.1 68416.m04962 kinesin motor protein-related kinesin-r... 29 1.6
At1g21790.1 68414.m02727 expressed protein 27 3.8
At5g46400.1 68418.m05711 expressed protein 27 5.0
At2g28620.1 68415.m03479 kinesin motor protein-related 27 5.0
At2g20060.1 68415.m02344 ribosomal protein L4 family protein con... 27 5.0
At5g38270.1 68418.m04613 F-box family protein contains F-box dom... 27 6.6
At5g09640.1 68418.m01115 sinapoylglucose:choline sinapoyltransfe... 27 6.6
At5g62090.2 68418.m07793 expressed protein 26 8.7
At5g62090.1 68418.m07792 expressed protein 26 8.7
>At5g64370.1 68418.m08086 beta-ureidopropionase, putative /
beta-alanine synthase, putative similar to beta-alanine
synthase [Dictyostelium discoideum] GI:14334061;
contains Pfam profile PF00795: hydrolase,
carbon-nitrogen family
Length = 408
Score = 116 bits (280), Expect = 5e-27
Identities = 57/130 (43%), Positives = 81/130 (62%), Gaps = 3/130 (2%)
Frame = +3
Query: 30 SLEAIVNNNLSGKDLEEFNRIYYGR---KDHFEIKLKDTSXXXXXXXXXXXXXXXFPAKK 200
SL +++ NL + +E NR+ GR + +I L +++ F A K
Sbjct: 22 SLHQLLSANLKPELYQEVNRLLLGRNCGRSLEQIVLPESAKALSSKHDFDLQAASFSADK 81
Query: 201 EQTRPPRIVKVGIIQHSIAIPTDRPINEQKKAIFDKVKKIIDVAGQEGVHIICFQELWNM 380
EQ R PR+V+VG+IQ+SIA+PT P ++Q + IFDK+K IID AG GV+I+C QE W M
Sbjct: 82 EQMRNPRVVRVGLIQNSIALPTTAPFSDQTRGIFDKLKPIIDAAGVAGVNILCLQEAWTM 141
Query: 381 PFAFCTREKQ 410
PFAFCTRE++
Sbjct: 142 PFAFCTRERR 151
>At5g12040.2 68418.m01407 carbon-nitrogen hydrolase family protein
similar to Nit protein 2 [Homo sapiens] GI:9367116;
contains Pfam profile PF00795: hydrolase,
carbon-nitrogen family
Length = 294
Score = 31.5 bits (68), Expect = 0.23
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +3
Query: 276 INEQKKAIFDKVKKIIDVAGQEGVHIICFQELWNMPFA 389
+ KK KK I+ A +G ++ E+WN P++
Sbjct: 97 VTSDKKRNISHAKKAIEEAASKGAKLVLLPEIWNSPYS 134
>At5g12040.1 68418.m01408 carbon-nitrogen hydrolase family protein
similar to Nit protein 2 [Homo sapiens] GI:9367116;
contains Pfam profile PF00795: hydrolase,
carbon-nitrogen family
Length = 369
Score = 31.5 bits (68), Expect = 0.23
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +3
Query: 276 INEQKKAIFDKVKKIIDVAGQEGVHIICFQELWNMPFA 389
+ KK KK I+ A +G ++ E+WN P++
Sbjct: 97 VTSDKKRNISHAKKAIEEAASKGAKLVLLPEIWNSPYS 134
>At5g53130.1 68418.m06604 cyclic nucleotide-regulated ion channel /
cyclic nucleotide-gated channel (CNGC1) almost identical
to cyclic nucleotide-regulated ion channel 1 pir:T51354,
GI:11357236 from [Arabidopsis thaliana]
Length = 716
Score = 31.1 bits (67), Expect = 0.31
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +2
Query: 17 PRNPKP*SDRQQQLKWQRPRGVQQDLLWTERP--FRNQIKRYI 139
P N + R +Q KWQ RGV ++ L + P R IKR++
Sbjct: 434 PENLRKRIRRYEQYKWQETRGVDEENLLSNLPKDLRRDIKRHL 476
>At1g01340.1 68414.m00049 cyclic nucleotide-regulated ion channel
(CNGC10) (ACBK1) almost identical to CaM-regulated
potassium ion channel (ACBK1) GI:8515883 from
[Arabidopsis thaliana]; contains Pfam domain, PF00520:
Ion transport protein
Length = 706
Score = 29.5 bits (63), Expect = 0.94
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +2
Query: 44 RQQQLKWQRPRGVQQDLLWTERP--FRNQIKRYI 139
R +Q +WQ RGV+++ L P R IKR++
Sbjct: 425 RYEQYRWQETRGVEEETLLRNLPKDLRRDIKRHL 458
>At4g01010.1 68417.m00136 cyclic nucleotide-regulated ion channel,
putative (CNGC13) similar to CaM-regulated potassium ion
channel (ACBK1) GI:8515883 from [Arabidopsis thaliana]
Length = 696
Score = 29.1 bits (62), Expect = 1.2
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +2
Query: 44 RQQQLKWQRPRGVQQDLLWTERP--FRNQIKRY 136
R +Q KWQ RGV+++ L P R IKR+
Sbjct: 431 RYEQYKWQETRGVEEENLLRNLPKDLRRDIKRH 463
>At2g46430.1 68415.m05778 cyclic nucleotide-regulated ion channel /
cyclic nucleotide-gated channel (CNGC3) identical to
cyclic nucleotide and calmodulin-regulated ion channel
GI:4581201 from [Arabidopsis thaliana]
Length = 706
Score = 29.1 bits (62), Expect = 1.2
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +2
Query: 44 RQQQLKWQRPRGVQQDLLWTERP--FRNQIKRYI 139
+ +Q KWQ +GV+++ L + P R IKR++
Sbjct: 434 KYEQYKWQETKGVEEEALLSSLPKDLRKDIKRHL 467
>At3g45850.1 68416.m04962 kinesin motor protein-related
kinesin-related protein TKRP125, Nicotiana tabacum,
PIR:T02017
Length = 1058
Score = 28.7 bits (61), Expect = 1.6
Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = +3
Query: 243 QHSIAIPTDRPINEQ--KKAIFDKVKKIIDVAGQEGVHIICFQELWN 377
++ I IP DR I E+ KKA+ +K++++ + + ++ QEL+N
Sbjct: 426 KNGIYIPKDRYIQEEAEKKAMAEKIERLELQSESKDKRVVDLQELYN 472
>At1g21790.1 68414.m02727 expressed protein
Length = 288
Score = 27.5 bits (58), Expect = 3.8
Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -2
Query: 323 DYLFYLIENCFFLLVNWTV-GWY-RDRVLNNTN 231
+ L+ + CFF L+NW V W RD + NT+
Sbjct: 42 ELLWVICGGCFFQLMNWVVRSWISRDPIFVNTS 74
>At5g46400.1 68418.m05711 expressed protein
Length = 1036
Score = 27.1 bits (57), Expect = 5.0
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 332 GDIDYLFYLIENCFFLLVNWTVGWYR 255
GD D+ L E C N+T W+R
Sbjct: 312 GDFDWAINLYERCLIPCANYTEFWFR 337
>At2g28620.1 68415.m03479 kinesin motor protein-related
Length = 1076
Score = 27.1 bits (57), Expect = 5.0
Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Frame = +3
Query: 243 QHSIAIPTDRPINEQ--KKAIFDKVKKIIDVAGQ-EGVHIICFQELWN 377
++ I IP +R E+ KKA+ DK+++ ++V G+ + II QEL+N
Sbjct: 428 KNGIYIPKERYTQEEAEKKAMADKIEQ-MEVEGEAKDKQIIDLQELYN 474
>At2g20060.1 68415.m02344 ribosomal protein L4 family protein
contains Pfam profile PF00573: ribosomal protein L4/L1
family
Length = 300
Score = 27.1 bits (57), Expect = 5.0
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = -2
Query: 344 SLLTGDIDYLFYLIENCFFLLVNWTVGWYRDRVLNNTNFNDPRRAGLLL 198
S+LT D + L+ L + T+G Y+D V+ TNF + + ++L
Sbjct: 58 SILTPDDSFPSDLLTKKTVLTPDRTIGQYQDLVIPVTNFQNEEKGFMVL 106
>At5g38270.1 68418.m04613 F-box family protein contains F-box domain
Pfam:PF00646
Length = 406
Score = 26.6 bits (56), Expect = 6.6
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = +3
Query: 315 KIIDVAGQEGVHIICFQELWNMPFAFCTRE 404
K++D +G + + +I W PF + T++
Sbjct: 244 KVVDFSGNDPIEVIDKNPYWEHPFRYLTKK 273
>At5g09640.1 68418.m01115 sinapoylglucose:choline
sinapoyltransferase (SNG2) GC donor splice site at exon
11 and 13; TA donor splice site at exon 10; similar to
serine carboxypeptidase I precursor (SP:P37890) [Oryza
sativa]; wound-inducible carboxypeptidase, Lycopersicon
esculentum, EMBL:AF242849; contains Pfam profile
PF00450: Serine carboxypeptidase; identical to cDNA
sinapoylglucose:choline sinapoyltransferase (SNG2)
GI:15418806
Length = 465
Score = 26.6 bits (56), Expect = 6.6
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = -2
Query: 386 EGHVP*FLETNYMNSLLTGDIDYLFYLIEN 297
EG +P LET Y++ +GD++ +Y +++
Sbjct: 34 EGPLPFELETGYVSIGESGDVELFYYFVKS 63
>At5g62090.2 68418.m07793 expressed protein
Length = 816
Score = 26.2 bits (55), Expect = 8.7
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 282 EQKKAIFDKVKKIIDVAGQEGVHIICFQELWNMPFAFCTREKQ 410
E KA+ + V + I V + + II QEL + + FCTR +
Sbjct: 410 EYGKAVQESVYEHIRVVREGHLRIIFSQELKILSWEFCTRRHE 452
>At5g62090.1 68418.m07792 expressed protein
Length = 816
Score = 26.2 bits (55), Expect = 8.7
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 282 EQKKAIFDKVKKIIDVAGQEGVHIICFQELWNMPFAFCTREKQ 410
E KA+ + V + I V + + II QEL + + FCTR +
Sbjct: 410 EYGKAVQESVYEHIRVVREGHLRIIFSQELKILSWEFCTRRHE 452
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,353,628
Number of Sequences: 28952
Number of extensions: 178792
Number of successful extensions: 457
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 457
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 625471056
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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