Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_M07
(341 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr 1|||... 27 1.1
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 26 1.8
SPAC186.09 |||pyruvate decarboxylase |Schizosaccharomyces pombe|... 25 2.4
SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces po... 25 4.3
SPAC31G5.17c |rps1001|rps10-1|40S ribosomal protein S10|Schizosa... 24 5.6
SPBP22H7.08 |rps1002|rps10-2, rps10B|40S ribosomal protein S10|S... 24 5.6
SPBC1348.08c |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 24 7.5
SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 24 7.5
SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces ... 24 7.5
SPAC977.07c |||glycoprotein |Schizosaccharomyces pombe|chr 1|||M... 24 7.5
SPAC23G3.11 |rpn6||19S proteasome regulatory subunit Rpn6|Schizo... 23 9.8
>SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr
1|||Manual
Length = 710
Score = 26.6 bits (56), Expect = 1.1
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = -2
Query: 226 NSNPVNTNTTIAVCSRGRWFLNSETRHETNYNRI 125
N+N N A CS+ W + S T+ ++ + +
Sbjct: 304 NANKTQINIENATCSKMTWIMGSPTKEKSQWGSV 337
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 25.8 bits (54), Expect = 1.8
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 56 YCFTNQRLWYIKKYVY 103
YC TN LW+ + YV+
Sbjct: 976 YCKTNDMLWHYRSYVH 991
>SPAC186.09 |||pyruvate decarboxylase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 572
Score = 25.4 bits (53), Expect = 2.4
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 70 PKIMVYKEICLYIKNVCLKSDYN*SRVVSPNLKTIFPES 186
PK+ +K +++ L + N S V PN K+ FPES
Sbjct: 229 PKLRSFKAESAFLE---LANSLNCSVAVMPNAKSFFPES 264
>SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 743
Score = 24.6 bits (51), Expect = 4.3
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +3
Query: 147 CRVSEFKNHLPREHTAIVVFVLTGFELTRLHCIIHKIQNKVLENLLFIFNSIFFYL 314
C + FK +PR H V LTG L + ++H + ++L+ I + + L
Sbjct: 201 CLIKPFK--IPRRHFLRDVAFLTGTILLVIMFVLHDGSLSIWQSLVMILYYLLYVL 254
>SPAC31G5.17c |rps1001|rps10-1|40S ribosomal protein
S10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 144
Score = 24.2 bits (50), Expect = 5.6
Identities = 7/28 (25%), Positives = 20/28 (71%)
Frame = +2
Query: 23 IRTLIFFVFFFYCFTNQRLWYIKKYVYI 106
++T + +F+Y TN+ + Y+++Y+++
Sbjct: 55 LKTRYNWGWFYYTLTNEGVEYLREYLHL 82
>SPBP22H7.08 |rps1002|rps10-2, rps10B|40S ribosomal protein
S10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 24.2 bits (50), Expect = 5.6
Identities = 7/28 (25%), Positives = 20/28 (71%)
Frame = +2
Query: 23 IRTLIFFVFFFYCFTNQRLWYIKKYVYI 106
++T + +F+Y TN+ + Y+++Y+++
Sbjct: 55 LKTRYNWGWFYYTLTNEGVEYLREYLHL 82
>SPBC1348.08c |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 416
Score = 23.8 bits (49), Expect = 7.5
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1
Query: 154 SPNLKTIFPEST 189
SP+ KTI+PEST
Sbjct: 56 SPDTKTIYPEST 67
>SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 676
Score = 23.8 bits (49), Expect = 7.5
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 258 QNKVLENLLFIFNSIFFYL*IIQMF 332
+N VLEN L F+S++ ++ + Q+F
Sbjct: 294 RNFVLENHLVRFSSLYIFIVLSQIF 318
>SPBC577.06c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1877
Score = 23.8 bits (49), Expect = 7.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 255 IQNKVLENLLFIFNSIFFYL 314
++NK EN L +F + FYL
Sbjct: 62 LENKASENALTLFQQLRFYL 81
>SPAC977.07c |||glycoprotein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 416
Score = 23.8 bits (49), Expect = 7.5
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1
Query: 154 SPNLKTIFPEST 189
SP+ KTI+PEST
Sbjct: 56 SPDTKTIYPEST 67
>SPAC23G3.11 |rpn6||19S proteasome regulatory subunit
Rpn6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 421
Score = 23.4 bits (48), Expect = 9.8
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -3
Query: 279 DFLTLYFVFYELYNG 235
DF T Y FYE Y G
Sbjct: 221 DFKTAYSYFYEAYEG 235
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,148,487
Number of Sequences: 5004
Number of extensions: 19919
Number of successful extensions: 47
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 100068878
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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