Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_M07
         (341 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41270-1|AAA82439.2|  411|Caenorhabditis elegans Hypothetical pr...    27   3.5  
AL110479-1|CAB60310.2|  311|Caenorhabditis elegans Hypothetical ...    27   4.7  
Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical pr...    26   6.1  
Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical pr...    26   6.1  
Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical pr...    26   6.1  
Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical pr...    26   6.1  
Z83109-3|CAB05515.2|  300|Caenorhabditis elegans Hypothetical pr...    26   8.1  

>U41270-1|AAA82439.2|  411|Caenorhabditis elegans Hypothetical
           protein AH9.1 protein.
          Length = 411

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 12/56 (21%), Positives = 28/56 (50%)
 Frame = -2

Query: 247 IIQWSLVNSNPVNTNTTIAVCSRGRWFLNSETRHETNYNRILNIHF*YINIFLYIP 80
           +I  S +N   +  +  ++VC   ++F N+ET+       ++ +   +I + +Y P
Sbjct: 139 LISASALNIVAMTVDRYVSVCHPIKFFQNNETKPSRRRTMLIIVMIYFIALMIYFP 194


>AL110479-1|CAB60310.2|  311|Caenorhabditis elegans Hypothetical
           protein Y105C5B.1 protein.
          Length = 311

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 10/42 (23%), Positives = 20/42 (47%)
 Frame = +3

Query: 186 HTAIVVFVLTGFELTRLHCIIHKIQNKVLENLLFIFNSIFFY 311
           HT ++ +         +H   H  +N+  EN  F++N +F +
Sbjct: 161 HTVMIHYCWVSTRCDAVHNNRHYCRNEEYENQFFVYNLVFLF 202


>Z68338-9|CAA92762.2| 2923|Caenorhabditis elegans Hypothetical protein
            T24B8.7b protein.
          Length = 2923

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +2

Query: 5    LKRPSSIRTLIFFVFFFYCFTNQRLWYIKKYVY 103
            LKR ++   L  +V  +    N+ LWY KKY++
Sbjct: 2820 LKRATNSTDLTRYVLGY--LHNRELWYFKKYIF 2850


>Z68338-8|CAA92761.2| 2920|Caenorhabditis elegans Hypothetical protein
            T24B8.7a protein.
          Length = 2920

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +2

Query: 5    LKRPSSIRTLIFFVFFFYCFTNQRLWYIKKYVY 103
            LKR ++   L  +V  +    N+ LWY KKY++
Sbjct: 2817 LKRATNSTDLTRYVLGY--LHNRELWYFKKYIF 2847


>Z54218-6|CAA90960.2| 2923|Caenorhabditis elegans Hypothetical protein
            T24B8.7b protein.
          Length = 2923

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +2

Query: 5    LKRPSSIRTLIFFVFFFYCFTNQRLWYIKKYVY 103
            LKR ++   L  +V  +    N+ LWY KKY++
Sbjct: 2820 LKRATNSTDLTRYVLGY--LHNRELWYFKKYIF 2850


>Z54218-5|CAA90959.2| 2920|Caenorhabditis elegans Hypothetical protein
            T24B8.7a protein.
          Length = 2920

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +2

Query: 5    LKRPSSIRTLIFFVFFFYCFTNQRLWYIKKYVY 103
            LKR ++   L  +V  +    N+ LWY KKY++
Sbjct: 2817 LKRATNSTDLTRYVLGY--LHNRELWYFKKYIF 2847


>Z83109-3|CAB05515.2|  300|Caenorhabditis elegans Hypothetical
           protein F44G3.5 protein.
          Length = 300

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 19/57 (33%), Positives = 34/57 (59%)
 Frame = +3

Query: 120 FKIRL*LVSCRVSEFKNHLPREHTAIVVFVLTGFELTRLHCIIHKIQNKVLENLLFI 290
           ++IRL L++  +S+F  H+    TA+++ ++  F   +L    H++  K LEN LFI
Sbjct: 163 YEIRL-LINSIISKFI-HIFLPWTAVLLNLIV-FVFLKLRKKKHQMNRKSLENSLFI 216


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,198,195
Number of Sequences: 27780
Number of extensions: 109557
Number of successful extensions: 283
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 283
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 440341558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)