Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_M05
         (423 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_40067| Best HMM Match : Nop17p (HMM E-Value=1.5e-13)                31   0.52 
SB_56074| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.4  
SB_37663| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.4  

>SB_40067| Best HMM Match : Nop17p (HMM E-Value=1.5e-13)
          Length = 287

 Score = 30.7 bits (66), Expect = 0.52
 Identities = 15/43 (34%), Positives = 26/43 (60%)
 Frame = -2

Query: 212 SQLFCPPLGVFPKNSPKKSGSKLIFTLELPDVVACSEHDIKIT 84
           SQ   P   V  KNS +    +L+ T+ELP V++ ++ D++I+
Sbjct: 241 SQEIVPVYNVAVKNSSEGRPRRLVVTVELPGVLSVADCDLEIS 283


>SB_56074| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 387

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 87  HGHHYKL*THHSAMYFKIFF*YY 19
           HGH YK+  H+    +K+F  Y+
Sbjct: 284 HGHQYKVFAHYHGHQYKVFARYH 306


>SB_37663| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1735

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -2

Query: 200 CPPLGVFPKNSPKKS 156
           CPP  V+ KNSP+KS
Sbjct: 260 CPPTLVYDKNSPRKS 274


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,682,547
Number of Sequences: 59808
Number of extensions: 123424
Number of successful extensions: 276
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 276
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 801830705
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)