Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_M04
         (772 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF106592-2|AAK21364.1|  170|Caenorhabditis elegans Ferritin prot...    36   0.042
AF016447-16|AAG24016.1|  170|Caenorhabditis elegans Ferritin pro...    34   0.13 
AL132952-2|CAB63380.1|  190|Caenorhabditis elegans Hypothetical ...    30   1.6  

>AF106592-2|AAK21364.1|  170|Caenorhabditis elegans Ferritin protein
           2 protein.
          Length = 170

 Score = 35.5 bits (78), Expect = 0.042
 Identities = 17/57 (29%), Positives = 32/57 (56%)
 Frame = +2

Query: 188 LKSREVKFNDYHLVDYLSGEFLEEQYRGQRDLAGKASTLRKLLALHSVLGEFIFDKK 358
           L S     ND HL D++  ++L+EQ +   + A   + L++   +   +GE++FDK+
Sbjct: 113 LHSTAGNHNDAHLTDFIEEKYLDEQVKSINEFARMVANLKR---VGPGVGEYVFDKE 166


>AF016447-16|AAG24016.1|  170|Caenorhabditis elegans Ferritin
           protein 1 protein.
          Length = 170

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 16/49 (32%), Positives = 28/49 (57%)
 Frame = +2

Query: 212 NDYHLVDYLSGEFLEEQYRGQRDLAGKASTLRKLLALHSVLGEFIFDKK 358
           ND HL +Y+  ++LEEQ     + A   + +++       LGE++FDK+
Sbjct: 121 NDAHLTNYIQEKYLEEQVHSINEFARHIANIKR---AGPGLGEYLFDKE 166


>AL132952-2|CAB63380.1|  190|Caenorhabditis elegans Hypothetical
           protein Y51H4A.2 protein.
          Length = 190

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 19/47 (40%), Positives = 29/47 (61%)
 Frame = +1

Query: 592 QFVRKAFIILKKMYKLFDL*VRHQFNYIFRCCFFPKRNCHF*QLLSD 732
           QF+ K+F +  KMYK  ++ + +  + IF C FFPK+   F +LL D
Sbjct: 121 QFISKSFFLFDKMYK-NEVELSYFKSSIF-CTFFPKKITPF-RLLGD 164


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,490,823
Number of Sequences: 27780
Number of extensions: 330300
Number of successful extensions: 793
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)