Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_M02
         (635 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...   324   5e-91
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   6.5  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score =  324 bits (795), Expect = 5e-91
 Identities = 158/175 (90%), Positives = 167/175 (95%)
 Frame = +1

Query: 109 ETTQSGEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSK 288
           E  Q+G+VETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLT+PS+
Sbjct: 3   EENQNGDVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTNPSR 62

Query: 289 LDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADIS 468
           LDSGKELYIKIIPNKN+GTLTIIDTGIGMTKADLV+NLGTIAKSGTKAFMEALQAGADIS
Sbjct: 63  LDSGKELYIKIIPNKNDGTLTIIDTGIGMTKADLVHNLGTIAKSGTKAFMEALQAGADIS 122

Query: 469 MIGQFGVGFYSCYLVADRVTVHSKHNDDEQYMWESSAGGSFTVRSDPGETLGRGT 633
           MIGQFGVGFYS YLVAD+VTV SK+NDDEQY+WESSAGGSFTV  D GE LGRGT
Sbjct: 123 MIGQFGVGFYSAYLVADKVTVVSKNNDDEQYVWESSAGGSFTVTQDRGEPLGRGT 177


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 402 GYHCKIWHQGFHGG 443
           G +C+I+ +GF GG
Sbjct: 449 GKNCEIYDRGFPGG 462


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,075
Number of Sequences: 336
Number of extensions: 3118
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)