Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_M02
         (635 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_50934| Best HMM Match : HSP90 (HMM E-Value=0)                      132   3e-31
SB_87| Best HMM Match : HSP90 (HMM E-Value=9.4e-10)                   122   2e-28
SB_22016| Best HMM Match : HSP90 (HMM E-Value=0)                      110   8e-25
SB_40697| Best HMM Match : ABC_tran (HMM E-Value=7.1e-07)              29   2.4  
SB_45717| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.2  
SB_44356| Best HMM Match : Osteopontin (HMM E-Value=1)                 29   4.2  
SB_3247| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   4.2  
SB_7872| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   5.5  
SB_38761| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.3  
SB_26758| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-40)                 27   9.7  

>SB_50934| Best HMM Match : HSP90 (HMM E-Value=0)
          Length = 855

 Score =  132 bits (318), Expect = 3e-31
 Identities = 86/170 (50%), Positives = 103/170 (60%), Gaps = 1/170 (0%)
 Frame = +1

Query: 127 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKE 306
           + E   FQAE+ ++M LIIN+ Y NKEIFLRELISNSSDALDKIR  SLTD +  DSG E
Sbjct: 75  KAEKHEFQAEVNRMMKLIINSLYRNKEIFLRELISNSSDALDKIRLMSLTDKTAFDSGDE 134

Query: 307 LYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFG 486
           L IKI  +K    L + DTGIGMTK +L      I   GT A     ++G          
Sbjct: 135 LSIKIKADKENNILHVTDTGIGMTKEEL------IKNLGTIA-----KSGT--------- 174

Query: 487 VGFYSCYLVADRVTVHSKHNDDEQYMWESSAGGSFTVRSDP-GETLGRGT 633
                   +ADRV V SK+NDD+QY+WES A  SF++  DP G TL RGT
Sbjct: 175 --------IADRVIVTSKNNDDKQYIWESDA-SSFSISEDPRGPTLKRGT 215


>SB_87| Best HMM Match : HSP90 (HMM E-Value=9.4e-10)
          Length = 739

 Score =  122 bits (295), Expect = 2e-28
 Identities = 72/183 (39%), Positives = 113/183 (61%), Gaps = 8/183 (4%)
 Frame = +1

Query: 109 ETTQSGEVETFAFQA--EIAQLMSLIINTFYSN-KEIFLRELISNSSDALDKIRYESLTD 279
           ETT    VE  +  +  ++ + + L++++  +   ++F+RE+ISN+SDAL+K+R+  LT 
Sbjct: 49  ETTDDRSVEESSETSGEDVEEPLELLMSSQKTKLSQVFIREVISNASDALEKVRHFFLTG 108

Query: 280 PSKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGA 459
               ++   L I I  ++  GT TI D G+GMT+ +L+++LG IAKSG+K FME L+  A
Sbjct: 109 KDVSETETSLEIMIETDQEAGTFTIQDNGVGMTEEELMDHLGVIAKSGSKVFMEKLKNEA 168

Query: 460 DIS---MIGQFGVGFYSCYLVADRVTVHSK--HNDDEQYMWESSAGGSFTVRSDPGETLG 624
             S   +IGQFGVGFYS ++VAD+V V++K    + + Y W S   GS+      G  + 
Sbjct: 169 RSSHENIIGQFGVGFYSTFMVADKVDVYTKSYQPNSQGYFWTSDGSGSYEYAEANG--VA 226

Query: 625 RGT 633
           RGT
Sbjct: 227 RGT 229


>SB_22016| Best HMM Match : HSP90 (HMM E-Value=0)
          Length = 581

 Score =  110 bits (265), Expect = 8e-25
 Identities = 49/62 (79%), Positives = 56/62 (90%)
 Frame = +1

Query: 448 QAGADISMIGQFGVGFYSCYLVADRVTVHSKHNDDEQYMWESSAGGSFTVRSDPGETLGR 627
           +AGADISMIGQFGVGFYS YLVA++V V +KHNDDEQY+WES+AGGSFTV+ D GE LGR
Sbjct: 59  KAGADISMIGQFGVGFYSAYLVAEKVVVTTKHNDDEQYIWESAAGGSFTVKRDSGEPLGR 118

Query: 628 GT 633
           GT
Sbjct: 119 GT 120


>SB_40697| Best HMM Match : ABC_tran (HMM E-Value=7.1e-07)
          Length = 659

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 24/92 (26%), Positives = 41/92 (44%)
 Frame = +1

Query: 103 GMETTQSGEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDP 282
           GM+ T  G+VET    A + Q+  + + T   N       ++ N+S   DK  YE + + 
Sbjct: 440 GMDPTFRGKVETRGSIAYVPQMPWIFLGTVREN-------ILFNASYDADK--YERVIEA 490

Query: 283 SKLDSGKELYIKIIPNKNEGTLTIIDTGIGMT 378
             L    ELY  ++ N ++  +    +G   T
Sbjct: 491 CDLKQTAELYYLLVTNTSKVRVDFYKSGTAHT 522


>SB_45717| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 721

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 12/57 (21%), Positives = 31/57 (54%)
 Frame = +1

Query: 283 SKLDSGKELYIKIIPNKNEGTLTIIDTGIGMTKADLVNNLGTIAKSGTKAFMEALQA 453
           +K+  G+E+   +  ++NE     ++  +G ++ D++ N+G      T++ +E  +A
Sbjct: 265 AKISDGQEIKFSVFIDENEYRSICLNLQVGPSEPDVLKNIGVTRMPETRSNVENCRA 321


>SB_44356| Best HMM Match : Osteopontin (HMM E-Value=1)
          Length = 365

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
 Frame = +1

Query: 223 LISNSSDALDKIRY--ESLTDPSKLDSGKELYIKI--IPNKNEGTLTIIDTGIGMTKADL 390
           LIS+S +  ++ R+  E +   S+L S + +Y +     N+N   L I+D+ I   +A+ 
Sbjct: 283 LISSSDEENNQERFKEEKIATSSQLSS-ERVYQRTQEANNQNNRLLGIVDSNILKARANA 341

Query: 391 VNNLGTIAKSGTKAFMEALQAGA 459
            N LG  A S +++  +  Q  A
Sbjct: 342 GNKLGKSAMSRSRSAAQRRQLAA 364


>SB_3247| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 91

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
 Frame = +1

Query: 160 AQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPS-KLDSGKELYIKIIPNKN 336
           AQ+  L+ ++ + N +    ++ +  S ALD++ YE   DP  K DS ++++I +  N+ 
Sbjct: 20  AQVCELLKDSQFLNMDATDAQIHTVVSGALDRLHYEK--DPCVKYDSNRKVWIYLHRNRT 77

Query: 337 E 339
           E
Sbjct: 78  E 78


>SB_7872| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 135

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +1

Query: 241 DALDKIRYESLTDPSKLDSGKELYIKIIPNKNE 339
           DAL K+R +   +PS +D G E+ ++    +N+
Sbjct: 32  DALSKLRQKEYAEPSGIDEGDEVLLRQTRRENK 64


>SB_38761| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 169

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 16/70 (22%), Positives = 30/70 (42%)
 Frame = +1

Query: 103 GMETTQSGEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDP 282
           G  T    ++ +FA+      L ++ I  +  +  ++ R  +     A+D IRY +   P
Sbjct: 70  GQVTVNGQKITSFAYNGNTKTLRTVQIGNYSYSTSLYCRPYV-----AMDSIRYATRLRP 124

Query: 283 SKLDSGKELY 312
            K  S +  Y
Sbjct: 125 MKNGSNRSTY 134


>SB_26758| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-40)
          Length = 1413

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +1

Query: 124 GEVETFAF-QAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIR 261
           GE ETF+   A I    S+++N FY+      R L+ N++   D+I+
Sbjct: 576 GERETFSITSANIGGNDSIVVNLFYNVTLELRRTLLQNNNVRKDRIQ 622


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,883,917
Number of Sequences: 59808
Number of extensions: 407865
Number of successful extensions: 976
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 974
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1596754500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)