BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_M02
(635 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 26 1.1
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein. 25 2.7
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 24 3.5
AY536865-1|AAT07965.1| 650|Anopheles gambiae tryptophan transpo... 24 4.6
AJ626713-1|CAF25029.1| 650|Anopheles gambiae tryptophan transpo... 24 4.6
Z69981-1|CAA93821.1| 327|Anopheles gambiae maltase precursor pr... 23 8.1
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 23 8.1
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 25.8 bits (54), Expect = 1.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +1
Query: 574 SAGGSFTVRSDPGETLGRG 630
++GG F + DP +T+G G
Sbjct: 822 ASGGGFLITGDPSDTIGAG 840
>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
Length = 1356
Score = 24.6 bits (51), Expect = 2.7
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 187 TFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELYIK 318
TFY KE+ + +L N AL+ +E LDS KEL+++
Sbjct: 835 TFYGLKELEILQLDHNLLTALNGFEFEG------LDSLKELFLQ 872
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 24.2 bits (50), Expect = 3.5
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -3
Query: 156 FRLEGE-GFHLARLCSLHTFRHFDVSS*TFNSSP 58
FR GE FHL+++ S H F D+ F SP
Sbjct: 930 FRRHGEVNFHLSQVLSGHGFFRDDLCRMGFTPSP 963
>AY536865-1|AAT07965.1| 650|Anopheles gambiae tryptophan
transporter protein.
Length = 650
Score = 23.8 bits (49), Expect = 4.6
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +3
Query: 564 VGIVRWRLFYCALRPW 611
+G WRL C L PW
Sbjct: 243 IGTPDWRLVLCLLVPW 258
>AJ626713-1|CAF25029.1| 650|Anopheles gambiae tryptophan
transporter protein.
Length = 650
Score = 23.8 bits (49), Expect = 4.6
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +3
Query: 564 VGIVRWRLFYCALRPW 611
+G WRL C L PW
Sbjct: 243 IGTPDWRLVLCLLVPW 258
>Z69981-1|CAA93821.1| 327|Anopheles gambiae maltase precursor
protein.
Length = 327
Score = 23.0 bits (47), Expect = 8.1
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +1
Query: 256 IRYESLTDPSKLDSGKELY 312
I +E DP+ ++GK+LY
Sbjct: 131 ISWEDTVDPAACNAGKDLY 149
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
TPR-containing phosphoprotein protein.
Length = 1200
Score = 23.0 bits (47), Expect = 8.1
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = -1
Query: 161 AISAWKAKVSTSPDCVVSIPSGILMYLLKLS 69
A++ +K + T+P+C ++ G+ LKLS
Sbjct: 181 ALAFYKKALRTNPNCPAAVRLGMGHCFLKLS 211
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 667,535
Number of Sequences: 2352
Number of extensions: 12814
Number of successful extensions: 88
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 88
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -