Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_M01
(545 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC18H10.12c |rpl701||60S ribosomal protein L7|Schizosaccharomy... 228 5e-61
SPAC3H5.07 |rpl702|rpl7-2, rpl7, rpl7b|60S ribosomal protein L7|... 224 8e-60
SPAC664.06 |rpl703|rpl7|60S ribosomal protein L7|Schizosaccharom... 188 5e-49
SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange facto... 31 0.11
SPAC1805.06c |hem2||porphobilinogen synthase Hem2 |Schizosacchar... 30 0.19
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 29 0.59
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 27 1.4
SPAC3C7.11c |cnx1|cal1, cal1|calnexin |Schizosaccharomyces pombe... 27 1.8
SPAPB8E5.03 |mae1||malic acid transport protein Mae1 |Schizosacc... 27 1.8
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 2.4
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 4.2
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 26 4.2
SPCC1840.03 |sal3|pse1|karyopherin Sal3|Schizosaccharomyces pomb... 25 5.5
SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation protein... 25 5.5
SPAC22F8.04 |||triose phosphate transporter |Schizosaccharomyces... 25 5.5
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 25 5.5
SPBC646.09c |int6|yin6|translation initiation factor eIF3e|Schiz... 25 5.5
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 5.5
SPAC11E3.10 |||VanZ-like family protein|Schizosaccharomyces pomb... 25 7.3
SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9 |Schizos... 25 7.3
SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyc... 25 9.6
SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large subunit|... 25 9.6
>SPBC18H10.12c |rpl701||60S ribosomal protein L7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 251
Score = 228 bits (557), Expect = 5e-61
Identities = 97/168 (57%), Positives = 134/168 (79%), Gaps = 1/168 (0%)
Frame = +2
Query: 2 YVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIA 181
YVP E KL FVIRIRG+N + PK RK++QL RL QINNGVFV+ NKAT ML++ EPY+
Sbjct: 84 YVPDETKLVFVIRIRGINNIPPKARKIMQLLRLIQINNGVFVKFNKATKEMLQVVEPYVT 143
Query: 182 WGYPNLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQNIICVEDLIHEIFTVGEKF 361
+G PNLK+VREL+YKRGF K+N +R+ ++ N++IE L K +I+ +EDLIHEI+TVG F
Sbjct: 144 YGIPNLKTVRELLYKRGFGKVNKQRIALSDNAIIEAALGKYSILSIEDLIHEIYTVGPNF 203
Query: 362 KYASNFLWPFKLNNPTGGWR-KKTIHYVDGGDFGNREDKVNELLRRMV 502
K A+NF+WPF+L++P GGWR +K H+++GGD G R++ +N L+R+M+
Sbjct: 204 KQAANFIWPFQLSSPLGGWRDRKFKHFIEGGDAGKRDEHINSLVRKML 251
>SPAC3H5.07 |rpl702|rpl7-2, rpl7, rpl7b|60S ribosomal protein
L7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 250
Score = 224 bits (547), Expect = 8e-60
Identities = 95/168 (56%), Positives = 133/168 (79%), Gaps = 1/168 (0%)
Frame = +2
Query: 2 YVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIA 181
+VP E KL FV+RIRG+N + PK RK++QL RL QINNG+FV+ NKA ML++ EPY+
Sbjct: 83 FVPHEPKLIFVVRIRGINNIPPKARKIMQLLRLLQINNGIFVKFNKAIKEMLQVVEPYVT 142
Query: 182 WGYPNLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQNIICVEDLIHEIFTVGEKF 361
+G PN K+VREL+YKRGF K+N +R+P++ N++IE L K +I+ VEDLIHEI+TVG F
Sbjct: 143 YGIPNHKTVRELIYKRGFGKVNKQRIPLSDNAIIEAALGKYSILSVEDLIHEIYTVGPNF 202
Query: 362 KYASNFLWPFKLNNPTGGWR-KKTIHYVDGGDFGNREDKVNELLRRMV 502
K A+NFLWPFKL++P GGWR +K H+++GGD G R++ +N L+++M+
Sbjct: 203 KQAANFLWPFKLSSPLGGWRERKFKHFIEGGDAGKRDEHINGLVQKML 250
>SPAC664.06 |rpl703|rpl7|60S ribosomal protein
L7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 249
Score = 188 bits (458), Expect = 5e-49
Identities = 88/168 (52%), Positives = 117/168 (69%), Gaps = 1/168 (0%)
Frame = +2
Query: 2 YVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIA 181
+VP E KL FVIRI GV + PK+RKVL+L RL +INN VFVR NKA MLRI EPY+
Sbjct: 82 FVPDETKLLFVIRIAGVKNMPPKIRKVLRLLRLSRINNAVFVRNNKAVAQMLRIVEPYVM 141
Query: 182 WGYPNLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQNIICVEDLIHEIFTVGEKF 361
+G PNL SVREL+YKRGF K+NG+R+ ++ N+LIE+ L K ++I +ED+IHEI+ VG F
Sbjct: 142 YGIPNLHSVRELIYKRGFGKINGQRIALSDNALIEEALGKYDVISIEDIIHEIYNVGSHF 201
Query: 362 KYASNFLWPFKLNNPTGG-WRKKTIHYVDGGDFGNREDKVNELLRRMV 502
K + FLWPF L KK H+ +G G +++NEL+++ V
Sbjct: 202 KEVTKFLWPFTLTPVKHSLMEKKVKHFNEGRKAGYCGEEINELIKKQV 249
>SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange factor
Sec74|Schizosaccharomyces pombe|chr 1|||Manual
Length = 928
Score = 31.1 bits (67), Expect = 0.11
Identities = 15/35 (42%), Positives = 25/35 (71%)
Frame = +3
Query: 276 HSSRRDLANRTSSALRISSMRYLLSVRSSSTQVTS 380
HSS + L+N+ SSAL+++ + S +SSS+Q +S
Sbjct: 90 HSSSQKLSNKVSSALKLTIPKRWRSSKSSSSQCSS 124
>SPAC1805.06c |hem2||porphobilinogen synthase Hem2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 329
Score = 30.3 bits (65), Expect = 0.19
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +2
Query: 194 NLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLS--KQNIICVEDLIHEIFTVGEKFKY 367
N KSV + G L G ++ I+ + ++ R+ KQ ++ +E L H++ + K+
Sbjct: 143 NAKSVERIAEVSGNYALAGAQI-ISPSDCMDGRVKAIKQKLVELE-LSHKVCVISYSAKF 200
Query: 368 ASNFLWPFK 394
AS F PF+
Sbjct: 201 ASGFFGPFR 209
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 28.7 bits (61), Expect = 0.59
Identities = 30/105 (28%), Positives = 50/105 (47%)
Frame = +3
Query: 81 YCSCSGCVRSTTACSFVSTRPQ*TCFVSLSPILHGATPT*RVSESWCTNAVSPN*TGSVS 260
Y + +G +++T + S VS+ + S SP T T S S +++ S + + S S
Sbjct: 116 YLTGNGVLQTTVSSSSVSSTTSSSS--SSSPSSSSTTTTTSPSSSSSSSSSSSS-SSSSS 172
Query: 261 RSPPTHSSRRDLANRTSSALRISSMRYLLSVRSSSTQVTSCGHSN 395
S + SS ++ +SS+ SS S SSS +TS S+
Sbjct: 173 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSS 217
Score = 25.0 bits (52), Expect = 7.3
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +3
Query: 207 SESWCTNAVSPN*TGSVSRSPPTHSSRRDLANRTSSALRISSMRYLLSVRSSSTQVTS 380
S S +++ S + S + +HSS ++ +SS+ R SS ++ SSST +++
Sbjct: 195 SSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSSFITTMSSSTFIST 252
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 27.5 bits (58), Expect = 1.4
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Frame = +3
Query: 102 VRSTTACSFVSTRPQ*TCFVSLSPILHGATPT*RVSESWCTNAVSPN*TG-------SVS 260
V STTA S ST P T S + +TP V+ + T+A S T SVS
Sbjct: 460 VNSTTATSASST-PL-TSVNSTTATSASSTPLTSVNSTSATSASSTPLTSANSTTSTSVS 517
Query: 261 RSPPTHSSRRDLANRTSSALRISSMRYLLSVRSSSTQVTSCGHSN*TT 404
+ P++++ L + S+ +SS + +SST +TS + T+
Sbjct: 518 STAPSYNTSSVLPTSSVSSTPLSSANSTTATSASSTPLTSVNSTTATS 565
Score = 25.8 bits (54), Expect = 4.2
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Frame = +3
Query: 102 VRSTTACSFVSTRPQ*TCFVSLSPILHGATPT*RVSESWCTNAVSPN*TG-------SVS 260
V STTA S ST P T S + +TP V+ + T+A S T SVS
Sbjct: 346 VNSTTATSASST-PL-TSVNSTTATSASSTPLTSVNSTSATSASSTPLTSANSTTSTSVS 403
Query: 261 RSPPTHSSRRDLANRTSSALRISSMRYLLSVRSSSTQVTSCGHSN*TT 404
+ P++++ L + S+ +SS + +SST ++S + T+
Sbjct: 404 STAPSYNTSSVLPTSSVSSTPLSSANSTTATSASSTPLSSVNSTTATS 451
>SPAC3C7.11c |cnx1|cal1, cal1|calnexin |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 560
Score = 27.1 bits (57), Expect = 1.8
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 191 PNLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQNII 313
P LK+ REL+ K+ + V SN ++EK L +II
Sbjct: 423 PKLKAERELLSKQESMEKQSMHVDEESNQILEKFLDVYDII 463
>SPAPB8E5.03 |mae1||malic acid transport protein Mae1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 27.1 bits (57), Expect = 1.8
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = -3
Query: 432 IVFLRQPPVGLFSLNGHRKLLAYLNFSPTVNISWMRSSTQMMF--CLLSLFSMSELEVI 262
IV++ Q + LFSL G L ++ + T+ SW ++ CLLS+ + ++ I
Sbjct: 68 IVYILQ--IFLFSLFGSCMLFRFIKYPSTIKDSWNHHLEKLFIATCLLSISTFIDMLAI 124
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 26.6 bits (56), Expect = 2.4
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Frame = +3
Query: 102 VRSTTACSFVSTRPQ*TC--FVSLSPILHGATPT*RVSESWCTNAVSPN*TGSVSRSPPT 275
V ST++ +F S P T ++S S ++ ++ S S T++ + S S P T
Sbjct: 189 VSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSS-----SLSTSSIPST 243
Query: 276 HSSRRDLANRTSSALRISSMRYLLSVRSSSTQVTSCGHSN 395
SS ++ TSS+L SS S SSS+ + S S+
Sbjct: 244 SSS----SSSTSSSLSSSSSSSTASSSSSSSSIISSSSSS 279
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 25.8 bits (54), Expect = 4.2
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Frame = +3
Query: 87 SCSGCVRSTTACSFVSTRPQ*TCFVSLSPILHGATPT*RVSESWCTNAVSPN*TGSVSRS 266
S S + S+++ S+ S S L ++ T S S+ T+ VS + S S S
Sbjct: 36 SSSSVIPSSSSSMLSSSSATAISSSSSSSPLSSSSFTSPASSSFITSLVSSSSQQSSSSS 95
Query: 267 PP-THSSRRDLANRTSSALRISSMRYLLSVRSSSTQVTS 380
T SS L + +S++ SS + LS SSS +S
Sbjct: 96 ASLTSSSSATLTSSSSASPTSSSSSHALSSSSSSLVASS 134
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 25.8 bits (54), Expect = 4.2
Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = -2
Query: 394 FEWPQEVTCVLELLTDSKYLMDEILNADDV-LFAKSLLD 281
F W CV S+Y+M +N D FA S LD
Sbjct: 125 FNWDMSWKCVQTFEGHSRYVMSLAINPKDTNTFASSCLD 163
>SPCC1840.03 |sal3|pse1|karyopherin Sal3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1095
Score = 25.4 bits (53), Expect = 5.5
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -2
Query: 502 DHSPEELVDLVLAVTEVAAVDVVNRLLAPTSSRVVQF 392
D + L D ++A+TE+A +V +L P V+ F
Sbjct: 232 DRDSDNLADCLMAITEIA--EVFPKLFKPIFESVIAF 266
>SPCC553.01c ||SPCC736.01c|meiotic chromosome segregation
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 715
Score = 25.4 bits (53), Expect = 5.5
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +3
Query: 267 PPTHSSRRDLANRTSSALRISSMRYLLSVRSSSTQVTSCGHSN 395
PP HS+ D++N ++ AL S+M + ++ST+ T ++N
Sbjct: 110 PPFHSANSDVSNNSNGALS-SNMLKTHAHHTNSTKSTIFRNAN 151
>SPAC22F8.04 |||triose phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 383
Score = 25.4 bits (53), Expect = 5.5
Identities = 12/37 (32%), Positives = 25/37 (67%)
Frame = -3
Query: 366 YLNFSPTVNISWMRSSTQMMFCLLSLFSMSELEVIGT 256
Y++ PT+++ ++ S+ +FCL L S++ LE++ T
Sbjct: 253 YVHEYPTLDLIYIFSALMSVFCL--LLSVASLELLHT 287
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 25.4 bits (53), Expect = 5.5
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -2
Query: 532 FLITIYFYLLDHSPEELVDLVLAVTEVAAVDV-VNRL 425
FL +Y+Y SP D+ A+T DV +NRL
Sbjct: 550 FLSLVYYYCPIESPVSKSDVYNAITSAVKRDVFINRL 586
>SPBC646.09c |int6|yin6|translation initiation factor
eIF3e|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 25.4 bits (53), Expect = 5.5
Identities = 12/47 (25%), Positives = 27/47 (57%)
Frame = -2
Query: 535 FFLITIYFYLLDHSPEELVDLVLAVTEVAAVDVVNRLLAPTSSRVVQ 395
FFL+++ + L+ + + L + + V +VDV+ L S++++Q
Sbjct: 343 FFLVSLCDHFLEGARKLLAEAYCRIHSVISVDVLANKLEMDSAQLIQ 389
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.4 bits (53), Expect = 5.5
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +3
Query: 150 TCFVSLSPILHGATPT*RVSESWCTNAVSPN*TGSVSRSPPTHSSRRDLANRTSSALRIS 329
T S S ++ ++P S S ++ S T S S S THSS A +SSA+ S
Sbjct: 676 TLVSSSSSLIVSSSPVASSSSSPIPSSSSLVSTYSASLSNITHSSLSLTAMSSSSAIPTS 735
Query: 330 -SMRYLLSVRSSSTQVTSCGHSN 395
+ L++ SS+T ++S S+
Sbjct: 736 VNSSTLITASSSNTLLSSITSSS 758
>SPAC11E3.10 |||VanZ-like family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 162
Score = 25.0 bits (52), Expect = 7.3
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -2
Query: 544 FFCFFLITIYFY-LLDHSPEELVDLVLAVTEV 452
FF FFL+T+ FY + D S L + V V
Sbjct: 46 FFVFFLLTLVFYWVFDLSRRRATQLTILVCGV 77
>SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 591
Score = 25.0 bits (52), Expect = 7.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -2
Query: 400 VQFEWPQEVTCVLELLTDSKYLMDEILNADDVLFAKSLLD 281
V+F PQ + +L +KYL D+++ D+ A L+D
Sbjct: 136 VKFTEPQIKCYMKQLFAGTKYLHDQLILHRDLKAANLLID 175
>SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 430
Score = 24.6 bits (51), Expect = 9.6
Identities = 16/50 (32%), Positives = 21/50 (42%)
Frame = -3
Query: 423 LRQPPVGLFSLNGHRKLLAYLNFSPTVNISWMRSSTQMMFCLLSLFSMSE 274
LR P L +L GH + L +SP SST C+ L + E
Sbjct: 311 LRNPYQRLHTLEGHEDEVYGLEWSPHDEPILASSSTDRRVCIWDLEKIGE 360
>SPBC28F2.12 |rpb1||DNA-directed RNA polymerase II large
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1752
Score = 24.6 bits (51), Expect = 9.6
Identities = 10/34 (29%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -3
Query: 432 IVFLRQPPVGLFSLNGHR-KLLAYLNFSPTVNIS 334
++F RQP + S+ GHR +++ Y F ++++
Sbjct: 448 VIFNRQPSLHKMSMMGHRIRVMPYSTFRLNLSVT 481
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,019,801
Number of Sequences: 5004
Number of extensions: 39338
Number of successful extensions: 163
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 161
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 225926624
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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