Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_M01
(545 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g44120.2 68415.m05488 60S ribosomal protein L7 (RPL7C) 243 7e-65
At2g44120.1 68415.m05487 60S ribosomal protein L7 (RPL7C) 243 7e-65
At3g13580.3 68416.m01710 60S ribosomal protein L7 (RPL7D) simila... 242 9e-65
At3g13580.2 68416.m01709 60S ribosomal protein L7 (RPL7D) simila... 242 9e-65
At3g13580.1 68416.m01708 60S ribosomal protein L7 (RPL7D) simila... 242 9e-65
At2g01250.1 68415.m00037 60S ribosomal protein L7 (RPL7B) 240 5e-64
At1g80750.1 68414.m09474 60S ribosomal protein L7 (RPL7A) simila... 149 2e-36
At3g19050.1 68416.m02420 kinesin motor protein-related contains ... 30 0.88
At2g35540.1 68415.m04353 DNAJ heat shock N-terminal domain-conta... 30 0.88
At4g38240.2 68417.m05401 alpha-1,3-mannosyl-glycoprotein beta-1,... 29 1.5
At4g38240.1 68417.m05400 alpha-1,3-mannosyl-glycoprotein beta-1,... 29 1.5
At1g26540.1 68414.m03234 agenet domain-containing protein contai... 29 1.5
At1g10450.1 68414.m01176 paired amphipathic helix repeat-contain... 29 2.0
At5g07630.1 68418.m00874 nuclear division RFT family protein low... 27 8.2
At4g26970.1 68417.m03881 aconitate hydratase, cytoplasmic, putat... 27 8.2
At1g24650.1 68414.m03102 leucine-rich repeat family protein / pr... 27 8.2
>At2g44120.2 68415.m05488 60S ribosomal protein L7 (RPL7C)
Length = 247
Score = 243 bits (594), Expect = 7e-65
Identities = 108/166 (65%), Positives = 135/166 (81%)
Frame = +2
Query: 2 YVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIA 181
YV EAKL F+IRIRG+N + PK +K+LQL RLRQI NGVF+++NKATVNMLR EPY+
Sbjct: 81 YVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATVNMLRRVEPYVT 140
Query: 182 WGYPNLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQNIICVEDLIHEIFTVGEKF 361
+GYPNLKSV+EL+YKRG+ KLN +R+ +T NS++++ L K IICVEDLIHEI TVG F
Sbjct: 141 YGYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGKHGIICVEDLIHEIMTVGPHF 200
Query: 362 KYASNFLWPFKLNNPTGGWRKKTIHYVDGGDFGNREDKVNELLRRM 499
K A+NFLWPF+L P GG +KK HYV+GGD GNRE+ +NEL+RRM
Sbjct: 201 KEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELVRRM 246
>At2g44120.1 68415.m05487 60S ribosomal protein L7 (RPL7C)
Length = 242
Score = 243 bits (594), Expect = 7e-65
Identities = 108/166 (65%), Positives = 135/166 (81%)
Frame = +2
Query: 2 YVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIA 181
YV EAKL F+IRIRG+N + PK +K+LQL RLRQI NGVF+++NKATVNMLR EPY+
Sbjct: 76 YVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATVNMLRRVEPYVT 135
Query: 182 WGYPNLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQNIICVEDLIHEIFTVGEKF 361
+GYPNLKSV+EL+YKRG+ KLN +R+ +T NS++++ L K IICVEDLIHEI TVG F
Sbjct: 136 YGYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGKHGIICVEDLIHEIMTVGPHF 195
Query: 362 KYASNFLWPFKLNNPTGGWRKKTIHYVDGGDFGNREDKVNELLRRM 499
K A+NFLWPF+L P GG +KK HYV+GGD GNRE+ +NEL+RRM
Sbjct: 196 KEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELVRRM 241
>At3g13580.3 68416.m01710 60S ribosomal protein L7 (RPL7D) similar
to 60S ribosomal protein L7 GB:AAD14525 GI:4262232 from
[Arabidopsis thaliana]
Length = 244
Score = 242 bits (593), Expect = 9e-65
Identities = 108/166 (65%), Positives = 134/166 (80%)
Frame = +2
Query: 2 YVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIA 181
YV EAKL F+IRIRG+N + PK +K+LQL RLRQI NGVF+++NKAT+NMLR EPY+
Sbjct: 78 YVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVT 137
Query: 182 WGYPNLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQNIICVEDLIHEIFTVGEKF 361
+GYPNLKSV+EL+YKRGF KLN +R +T NS++++ L K IICVEDLIHEI TVG F
Sbjct: 138 YGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVEDLIHEIMTVGPHF 197
Query: 362 KYASNFLWPFKLNNPTGGWRKKTIHYVDGGDFGNREDKVNELLRRM 499
K A+NFLWPF+L P GG +KK HYV+GGD GNRE+ +NEL+RRM
Sbjct: 198 KEANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINELVRRM 243
>At3g13580.2 68416.m01709 60S ribosomal protein L7 (RPL7D) similar
to 60S ribosomal protein L7 GB:AAD14525 GI:4262232 from
[Arabidopsis thaliana]
Length = 244
Score = 242 bits (593), Expect = 9e-65
Identities = 108/166 (65%), Positives = 134/166 (80%)
Frame = +2
Query: 2 YVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIA 181
YV EAKL F+IRIRG+N + PK +K+LQL RLRQI NGVF+++NKAT+NMLR EPY+
Sbjct: 78 YVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVT 137
Query: 182 WGYPNLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQNIICVEDLIHEIFTVGEKF 361
+GYPNLKSV+EL+YKRGF KLN +R +T NS++++ L K IICVEDLIHEI TVG F
Sbjct: 138 YGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVEDLIHEIMTVGPHF 197
Query: 362 KYASNFLWPFKLNNPTGGWRKKTIHYVDGGDFGNREDKVNELLRRM 499
K A+NFLWPF+L P GG +KK HYV+GGD GNRE+ +NEL+RRM
Sbjct: 198 KEANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINELVRRM 243
>At3g13580.1 68416.m01708 60S ribosomal protein L7 (RPL7D) similar
to 60S ribosomal protein L7 GB:AAD14525 GI:4262232 from
[Arabidopsis thaliana]
Length = 244
Score = 242 bits (593), Expect = 9e-65
Identities = 108/166 (65%), Positives = 134/166 (80%)
Frame = +2
Query: 2 YVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIA 181
YV EAKL F+IRIRG+N + PK +K+LQL RLRQI NGVF+++NKAT+NMLR EPY+
Sbjct: 78 YVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVT 137
Query: 182 WGYPNLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQNIICVEDLIHEIFTVGEKF 361
+GYPNLKSV+EL+YKRGF KLN +R +T NS++++ L K IICVEDLIHEI TVG F
Sbjct: 138 YGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVEDLIHEIMTVGPHF 197
Query: 362 KYASNFLWPFKLNNPTGGWRKKTIHYVDGGDFGNREDKVNELLRRM 499
K A+NFLWPF+L P GG +KK HYV+GGD GNRE+ +NEL+RRM
Sbjct: 198 KEANNFLWPFQLKAPLGGMKKKRNHYVEGGDAGNRENFINELVRRM 243
>At2g01250.1 68415.m00037 60S ribosomal protein L7 (RPL7B)
Length = 242
Score = 240 bits (587), Expect = 5e-64
Identities = 106/166 (63%), Positives = 134/166 (80%)
Frame = +2
Query: 2 YVPGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIA 181
YV EAKL F+IRIRG+N + PK +K+LQL RLRQI NGVF+++NKAT+NMLR EPY+
Sbjct: 76 YVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKATMNMLRRVEPYVT 135
Query: 182 WGYPNLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQNIICVEDLIHEIFTVGEKF 361
+G+PNLKSV+EL+YKRG+ KLN +R+ +T NS++E+ L K IIC EDLIHEI TVG F
Sbjct: 136 YGFPNLKSVKELIYKRGYGKLNHQRIALTDNSIVEQALGKHGIICTEDLIHEILTVGPHF 195
Query: 362 KYASNFLWPFKLNNPTGGWRKKTIHYVDGGDFGNREDKVNELLRRM 499
K A+NFLWPF+L P GG +KK HYV+GGD GNRE+ +NEL+RRM
Sbjct: 196 KEANNFLWPFQLKAPLGGLKKKRNHYVEGGDAGNRENFINELIRRM 241
>At1g80750.1 68414.m09474 60S ribosomal protein L7 (RPL7A) similar
to ribosomal protein L7 GB:AAA03081 GI:307388 from [Homo
sapiens]
Length = 247
Score = 149 bits (360), Expect = 2e-36
Identities = 68/166 (40%), Positives = 107/166 (64%), Gaps = 2/166 (1%)
Frame = +2
Query: 8 PGEAKLAFVIRIRGVNQVSPKVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEPYIAWG 187
P ++ L F+IRI+G N + PK +++L +L+ + GVF + + L +PY+ +G
Sbjct: 82 PVKSDLVFIIRIQGKNDMHPKTKRILNNLQLKSVFTGVFAKATDSLFQKLLKVQPYVTYG 141
Query: 188 YPNLKSVRELVYKRGFAKLNGKRVPITSNSLIEKRLSKQNIICVEDLIHEIFTVGEKFKY 367
YPN KSV++L+YK+G + G VP+T N++IE+ L + I+ +EDL++EI VG+ F+
Sbjct: 142 YPNDKSVKDLIYKKGCTIIEGNPVPLTDNNIIEQALGEHKILGIEDLVNEIARVGDHFRE 201
Query: 368 ASNFLWPFKLNNPTGG--WRKKTIHYVDGGDFGNREDKVNELLRRM 499
FL P KLN P RKK + + +GGD GNREDK+N+L+ +M
Sbjct: 202 VMRFLGPLKLNKPVADVLHRKKQV-FSEGGDTGNREDKINDLISKM 246
>At3g19050.1 68416.m02420 kinesin motor protein-related contains Pfam
profile: PF00225 Kinesin motor domain; contains
non-consensus splice site (GC) at intron 12
Length = 2722
Score = 30.3 bits (65), Expect = 0.88
Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
Frame = -2
Query: 367 VLELLTDSKYLMDEILNADDVL----FAKSLLDE*VGGDRDTLPVQFGETAFVHQLSDTL 200
V ELL+++ L DE+L DDVL F SLL E RD V L TL
Sbjct: 2031 VQELLSENLNLHDELLRKDDVLKGLSFDLSLLQESASNSRDKKDETKEIMVHVEALEKTL 2090
Query: 199 QVGVAPCNIGLSDTKHVHCGLVETNE 122
+ +S + + L E+ E
Sbjct: 2091 ALKTFELEDAVSHAQMLEVRLQESKE 2116
>At2g35540.1 68415.m04353 DNAJ heat shock N-terminal
domain-containing protein contains Pfam profile PF00226:
DnaJ domain
Length = 575
Score = 30.3 bits (65), Expect = 0.88
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = -3
Query: 396 SLNGHRKLLAYLNFSPTVNISWMRSSTQMMFCLLSLFSMSELEVIGTRFPFS 241
SLN + +++L+F ISWM+ S+ M C F +SE +I PFS
Sbjct: 396 SLNPFKVWISWLDFESEKLISWMKISSSHMPC--GRFRVSEKALIEQVKPFS 445
>At4g38240.2 68417.m05401 alpha-1,3-mannosyl-glycoprotein
beta-1,2-N-acetylglucosaminyltransferase, putative
similar to N-acetylglucosaminyltransferase I from
Arabidopsis thaliana [gi:5139335]; contains AT-AC
non-consensus splice sites at intron 13
Length = 444
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 362 KYASNFLWPFKLNNPTGGWRKKTIHYVDGGDF 457
++ S +L P KLN+ T W+ K + Y+ G++
Sbjct: 321 QFFSQYLEPIKLNDVTVDWKAKDLGYLTEGNY 352
>At4g38240.1 68417.m05400 alpha-1,3-mannosyl-glycoprotein
beta-1,2-N-acetylglucosaminyltransferase, putative
similar to N-acetylglucosaminyltransferase I from
Arabidopsis thaliana [gi:5139335]; contains AT-AC
non-consensus splice sites at intron 13
Length = 444
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 362 KYASNFLWPFKLNNPTGGWRKKTIHYVDGGDF 457
++ S +L P KLN+ T W+ K + Y+ G++
Sbjct: 321 QFFSQYLEPIKLNDVTVDWKAKDLGYLTEGNY 352
>At1g26540.1 68414.m03234 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 695
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 66 GDTWLTPRIRMTNASLASPGT 4
G TW+ P I +N S+ SPGT
Sbjct: 138 GGTWIQPEIEESNKSMFSPGT 158
>At1g10450.1 68414.m01176 paired amphipathic helix repeat-containing
protein similar to Sin3 protein [Yarrowia lipolytica]
GI:18076824; contains Pfam profile PF02671: Paired
amphipathic helix repeat
Length = 1173
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 239 KLNGKRVPITSNSLIEKRLSKQNIICVEDL 328
K+N + + S IEK LS N+ C+E L
Sbjct: 438 KMNNNTISVDSTICIEKHLSAMNLRCIERL 467
>At5g07630.1 68418.m00874 nuclear division RFT family protein low
similarity to SP|P38206 Nuclear division RFT1 protein
{Saccharomyces cerevisiae}; contains Pfam profile
PF04506: Rft protein
Length = 401
Score = 27.1 bits (57), Expect = 8.2
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -2
Query: 481 VDLVLAVTEVAAVDVVNRLLAPTSSRVVQFEWPQEVTCVLELLTDSKYLMDEIL 320
V L +A+T A + V+ S Q W CVLEL+ + Y++ + L
Sbjct: 27 VPLGIAITIAACIFVLWWQNLSYSDPYAQAIWIHGFACVLELMAEPLYILSQTL 80
>At4g26970.1 68417.m03881 aconitate hydratase, cytoplasmic, putative
/ citrate hydro-lyase/aconitase, putative strong
similarity to SP|P49608 Aconitate hydratase, cytoplasmic
(EC 4.2.1.3) (Citrate hydro-lyase) (Aconitase)
{Cucurbita maxima}; contains Pfam profiles PF00330:
Aconitase family (aconitate hydratase), PF00694:
Aconitase C-terminal domain
Length = 995
Score = 27.1 bits (57), Expect = 8.2
Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
Frame = -1
Query: 230 RVCTPTL--GHSSSWGSPMQYRAQ 165
RVC+ + H SWGSP RAQ
Sbjct: 57 RVCSASTRWSHGGSWGSPASLRAQ 80
>At1g24650.1 68414.m03102 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 886
Score = 27.1 bits (57), Expect = 8.2
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 329 IHEIFTVGEKFKYASNFLWPFKLNNPTGGW 418
++ + ++ E F Y NF +K N+P GW
Sbjct: 327 VNTLLSIVEAFGYPVNFAEKWKGNDPCSGW 356
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,668,492
Number of Sequences: 28952
Number of extensions: 202718
Number of successful extensions: 618
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 617
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1023490624
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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