Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_L17
(556 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0877 - 6878905-6879600,6880696-6880968 49 2e-06
10_08_1015 - 22255135-22255693,22256437-22256836,22257938-222583... 43 1e-04
07_01_1210 - 11538233-11538349,11538532-11538612,11538697-115387... 36 0.016
03_02_0148 - 5928703-5928931,5929099-5929171,5929288-5929408,592... 36 0.022
05_02_0101 + 6611694-6611834,6612651-6612734,6613035-6613096,661... 35 0.038
02_01_0763 - 5665010-5665202,5665285-5665375,5665460-5666245,566... 35 0.038
03_02_1016 + 13228113-13228964 34 0.066
11_04_0086 + 13362788-13362937,13363887-13363970,13364233-133642... 33 0.15
05_04_0010 - 17132810-17132935,17133017-17133169,17133202-171332... 32 0.27
01_01_1139 - 9024609-9024708,9024832-9024910,9025083-9025252,902... 32 0.35
03_02_0681 + 10358224-10359006,10359162-10359272,10360445-10360648 30 1.1
02_02_0134 + 7082462-7082627,7084199-7084325,7084404-7084611,708... 29 1.9
01_04_0043 + 15375459-15377606 28 4.4
06_03_1274 + 28897491-28897707,28897804-28897935,28898029-288980... 28 5.8
01_03_0311 + 14905995-14906393,14906982-14907009,14907893-149079... 28 5.8
03_05_0611 + 26113798-26114261,26114451-26114597,26114784-26115405 27 7.6
01_01_0873 + 6836746-6836775,6836859-6836918,6837729-6837899,683... 27 7.6
>01_01_0877 - 6878905-6879600,6880696-6880968
Length = 322
Score = 49.2 bits (112), Expect = 2e-06
Identities = 39/124 (31%), Positives = 52/124 (41%), Gaps = 20/124 (16%)
Frame = +1
Query: 208 HPLDTLKVHIQS-------------GR-GSPLECTKAIFKGGSLSNAYRGVWAPLGGIAA 345
HPLDTL++ +Q GR S + I + S YRG+ APL +A
Sbjct: 31 HPLDTLRIRLQQPPPPASPGITAAPGRPASAASLLRGILRAEGPSALYRGMGAPLASVAF 90
Query: 346 INAMVFGAYGNTRR------AMPNPDSLXXXXXXXXXXXXLQSFACAPVELVKTRQQLAK 507
NAMVF + R +M P S LQ+ +PVELVK R QL
Sbjct: 91 QNAMVFQVFAILSRSIDQPSSMSEPPSYTSVALAGVGTGALQTLILSPVELVKIRLQLEA 150
Query: 508 PSER 519
++
Sbjct: 151 AGQK 154
>10_08_1015 -
22255135-22255693,22256437-22256836,22257938-22258371,
22259586-22259977
Length = 594
Score = 43.2 bits (97), Expect = 1e-04
Identities = 38/147 (25%), Positives = 54/147 (36%), Gaps = 15/147 (10%)
Frame = +1
Query: 151 MAMDFXXXXXXXXXXXXXXHPLDTLKVHIQSGRGSP----------LECTKAIFKGGSLS 300
+A D HP DT+KV +QS P ++ K
Sbjct: 282 VAKDLTAGTVGGAAQLVVGHPFDTIKVKLQSQPTPPPGQPPKFAGAMDAVKQTLAAEGPR 341
Query: 301 NAYRGVWAPLGGIAAINAMVFGAYGNTR---RAMPN-PDSLXXXXXXXXXXXXLQSFACA 468
Y+G+ APL +AA NA++F G R+ P P ++ SF
Sbjct: 342 GLYKGMGAPLATVAAFNALLFTVRGQMEAVLRSEPGAPLTVSQQVVAGAGAGVAVSFLAC 401
Query: 469 PVELVKTRQQLAKP-SERMPSGAWAGA 546
P EL+K R Q + P+ A A A
Sbjct: 402 PTELIKCRLQAQSALASAAPAAAAAAA 428
Score = 39.1 bits (87), Expect = 0.002
Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 14/111 (12%)
Frame = +1
Query: 208 HPLDTLKVHIQS------GR----GSPLECTKAIFKGGSLSNAYRGVWAPLGGIAAINAM 357
HP DT+KV +QS G+ ++ K Y+G+ APL +AA NA+
Sbjct: 23 HPFDTIKVKLQSQPTPAPGQFPKYAGAVDAVKQTIATEGPRGLYKGMGAPLATVAAFNAL 82
Query: 358 VFGAYGNTR---RAMP-NPDSLXXXXXXXXXXXXLQSFACAPVELVKTRQQ 498
+F G R+ P P ++ SF P EL+K R Q
Sbjct: 83 LFTVRGQMEALLRSEPGQPLTVNQQVVAGAGAGVAVSFLACPTELIKCRLQ 133
>07_01_1210 -
11538233-11538349,11538532-11538612,11538697-11538758,
11539108-11539159,11539779-11539868,11539957-11540052,
11540127-11540180,11540314-11540404,11540731-11540807,
11541089-11541171,11541441-11541492
Length = 284
Score = 36.3 bits (80), Expect = 0.016
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 4/104 (3%)
Frame = +1
Query: 208 HPLDTLKVHIQSGRGSPLECTKAIFKGGSLSNAYRGVWAPLGGIAAINAMVFGAYGNTRR 387
+P+DT+K +Q+ +G +K +KG Y G+ + G+ +A+ G Y T+R
Sbjct: 35 YPIDTIKTRLQAAKGG----SKIQWKG-----LYAGLGGNIAGVLPASAIFIGVYEPTKR 85
Query: 388 AM----PNPDSLXXXXXXXXXXXXLQSFACAPVELVKTRQQLAK 507
+ P S S P E+VK R Q+++
Sbjct: 86 KLLEMFPENLSAVAHLTAGAIGGAASSLIRVPTEVVKQRMQMSQ 129
>03_02_0148 -
5928703-5928931,5929099-5929171,5929288-5929408,
5929907-5929952,5930361-5930571,5930837-5930986,
5931122-5931179,5931285-5931400,5931986-5932091
Length = 369
Score = 35.9 bits (79), Expect = 0.022
Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 12/110 (10%)
Frame = +1
Query: 208 HPLDTLKVHIQS--------GRGSPLECTKAIFKGGSLSNAYRGVWAPLGGIAAINAMVF 363
HP+DTLK +QS + + + + ++ L YRG+ + G A A F
Sbjct: 55 HPVDTLKTRLQSQAIITGAKAQKNIFQMIRTVWVSDGLKGFYRGISPGVTGSLATGATYF 114
Query: 364 GAYGNTR----RAMPNPDSLXXXXXXXXXXXXLQSFACAPVELVKTRQQL 501
G +T+ + PN L SF P E++K R Q+
Sbjct: 115 GVIESTKTWLEHSNPNLSGHWSHFIAGGIGDTLGSFIYVPCEVMKQRMQV 164
>05_02_0101 +
6611694-6611834,6612651-6612734,6613035-6613096,
6613304-6613322
Length = 101
Score = 35.1 bits (77), Expect = 0.038
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +1
Query: 211 PLDTLKVHIQSGRGSPLECTKAIFKGGSLSNAYRGVWAPLGGIAAINAMVFGAYGNTRR 387
P+D +KV IQ G GS + TK + + + Y+G+ A L A G++ T R
Sbjct: 42 PIDMVKVKIQLGEGSAAQVTKNMLANEGIGSFYKGLSAGLLRQATYTTARLGSFRMTNR 100
>02_01_0763 -
5665010-5665202,5665285-5665375,5665460-5666245,
5667745-5668225
Length = 516
Score = 35.1 bits (77), Expect = 0.038
Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 10/116 (8%)
Frame = +1
Query: 211 PLDTLKV--HIQSGRGSPLECTKAIFKGGSLSNAYRGVWAPLGGIAAINAMVFGAYGNTR 384
PLD LKV +Q+ R + L+ K I++ GSL +RG + +A +A+ F AY +
Sbjct: 253 PLDRLKVIMQVQTNRITVLQAVKDIWREGSLRGFFRGNGLNVVKVAPESAIRFYAYEMLK 312
Query: 385 RAM-----PNPDSLXXX--XXXXXXXXXLQSFACAPVELVKTR-QQLAKPSERMPS 528
+ N + + A P++LVKTR Q A S ++PS
Sbjct: 313 EYIMKSKGENKSDIGTSGRLMAGGLAGAVAQTAIYPIDLVKTRLQTFACGSGKIPS 368
>03_02_1016 + 13228113-13228964
Length = 283
Score = 34.3 bits (75), Expect = 0.066
Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Frame = -3
Query: 326 GAHTPRYAFDSDPPLKIALVHSKGLPLPDCICTFNVSKGCPANI----PAQPPM--HP 171
GA PR A + PPL++ LV + LPLP ++V G P N PA PP HP
Sbjct: 78 GAGRPRVA--ATPPLQLRLVGNSRLPLPAPAAPWHVMTGGPRNTMVLRPAPPPAMNHP 133
>11_04_0086 +
13362788-13362937,13363887-13363970,13364233-13364294,
13365146-13365507,13365928-13366142,13366236-13366292
Length = 309
Score = 33.1 bits (72), Expect = 0.15
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 211 PLDTLKVHIQSGRGSPLECTKAIFKGGSLSNAYRGVWAPL 330
P+D +KV IQ G GS TK + +S Y+G+ A L
Sbjct: 45 PIDMVKVRIQLGEGSAASVTKKMLANEGISAFYKGLSAGL 84
>05_04_0010 -
17132810-17132935,17133017-17133169,17133202-17133263,
17133384-17133435,17133794-17133883,17134075-17134170,
17134258-17134311,17134575-17134665,17134996-17135072,
17135770-17135852,17136057-17136111
Length = 312
Score = 32.3 bits (70), Expect = 0.27
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Frame = +1
Query: 208 HPLDTLKVHIQSGRGSPLECTKAIFKGGSLSNAYRGVWAPLGGIAAINAMVFGAYGNTRR 387
+P+DT+K +Q+ RG ++ +KG Y G+ + G+ +A+ G Y T+R
Sbjct: 36 YPIDTIKTRLQAARGG----SQIQWKG-----LYSGLAGNIAGVLPASAVFVGIYEPTKR 86
Query: 388 AM----PNPDSLXXXXXXXXXXXXLQSFACAPVELVKTRQQ 498
+ P S S P E+VK R Q
Sbjct: 87 KLLETFPENLSAVAHFTAGAIGGIAASLIRVPTEVVKQRMQ 127
>01_01_1139 -
9024609-9024708,9024832-9024910,9025083-9025252,
9025339-9025451,9025518-9025586,9025867-9025944,
9026022-9026084,9026590-9026670,9027166-9027222,
9027352-9027705
Length = 387
Score = 31.9 bits (69), Expect = 0.35
Identities = 21/102 (20%), Positives = 44/102 (43%), Gaps = 4/102 (3%)
Frame = +1
Query: 208 HPLDTLKVH--IQSGRGSPLECTKAIFKGGSLSNAYRGVWAPLGGIAAINAMVFGAYGNT 381
+PLD L++ +QSG + + + + L++ Y G+ L GIA A+ F +
Sbjct: 214 YPLDVLRLRLAVQSGHSTMSQVAMNMLRDEGLASFYGGLGPSLIGIAPYIAVNFCVFDLM 273
Query: 382 RRAMPN--PDSLXXXXXXXXXXXXLQSFACAPVELVKTRQQL 501
++++P + C P++ V+ + Q+
Sbjct: 274 KKSVPEKYKSRPETSLATALLSATFATLMCYPLDTVRRQMQM 315
>03_02_0681 + 10358224-10359006,10359162-10359272,10360445-10360648
Length = 365
Score = 30.3 bits (65), Expect = 1.1
Identities = 26/107 (24%), Positives = 42/107 (39%), Gaps = 10/107 (9%)
Frame = +1
Query: 211 PLDTLKVHIQSGRG--SPLECTKAIFKG-----GSLSNAYRGVWAPLGGIAAINAMVFGA 369
P+DTLK H+Q+G P+ A+ + G + YRG+ A G +A+ F
Sbjct: 61 PVDTLKTHMQAGAPPCRPVLSLGAVLRAAVSGEGGVRALYRGLPAMALGAGPAHAVYFSV 120
Query: 370 YGNTRRAMP---NPDSLXXXXXXXXXXXXLQSFACAPVELVKTRQQL 501
Y + + P++ P++ VK R QL
Sbjct: 121 YEFAKSRLSERLGPNNPAAHAASGVLATIASDAVFTPMDTVKQRLQL 167
Score = 28.3 bits (60), Expect = 4.4
Identities = 24/104 (23%), Positives = 40/104 (38%), Gaps = 8/104 (7%)
Frame = +1
Query: 211 PLDTLKVHIQSGRGSPL----ECTKAIFKGGSLSNAYRGVWAPLGGIAAINAMVFGAYGN 378
P+DT+K +Q SP C + + + L + + A A+ F Y
Sbjct: 157 PMDTVKQRLQL-TSSPYTGVSHCVRTVLRDEGLGAFFASYRTTVVMNAPYTAVHFATYEA 215
Query: 379 TRRAM----PNPDSLXXXXXXXXXXXXLQSFACAPVELVKTRQQ 498
+R + N DSL L + P+++VKT+ Q
Sbjct: 216 AKRMLGDMATNEDSLAVHATAGAAAGALAAAVTTPLDVVKTQLQ 259
>02_02_0134 +
7082462-7082627,7084199-7084325,7084404-7084611,
7084864-7084990,7085071-7085255,7085332-7085454,
7085777-7085836,7085980-7086117
Length = 377
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +1
Query: 259 LECTKAIFKGGSLSNAYRGVWAPLGGIAAINAMVFGAYGNTRRAMP 396
L+C K I++ L YRG+ L GI + + F Y + +P
Sbjct: 190 LDCVKTIYRQNGLRGLYRGMAPSLYGIFPYSGLKFYFYETMKTYVP 235
>01_04_0043 + 15375459-15377606
Length = 715
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 444 PCNCSSGCVSRQRVRVRHCSTSIPISSK 361
PC C GCVSRQ R+ S ++P + K
Sbjct: 463 PCYC--GCVSRQVDRIAKSSATVPAAVK 488
>06_03_1274 +
28897491-28897707,28897804-28897935,28898029-28898096,
28898216-28898280,28898468-28898534,28898630-28898917,
28898995-28899102,28899236-28899487,28899918-28899997,
28900092-28900185,28900728-28900810,28901319-28901873,
28902085-28902616
Length = 846
Score = 27.9 bits (59), Expect = 5.8
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 253 SPLECTKAIFKGGSLSNA 306
SP++C KA F GGS++ A
Sbjct: 727 SPVDCVKAAFPGGSMTGA 744
>01_03_0311 +
14905995-14906393,14906982-14907009,14907893-14907930,
14908741-14908878,14909180-14909356,14909497-14909550,
14909713-14909813,14910445-14910739
Length = 409
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 349 NAMVFGAYGNTRRAMPNP 402
NA+ FG Y TRRA+P P
Sbjct: 348 NAIAFGGYVVTRRALPTP 365
>03_05_0611 + 26113798-26114261,26114451-26114597,26114784-26115405
Length = 410
Score = 27.5 bits (58), Expect = 7.6
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 266 HSKGLPLPDCICTFNVSKGCPANIPAQPP 180
H GL L DC C N + A +P +PP
Sbjct: 100 HCNGLLLLDCNCVVNPATRWWARLPPRPP 128
>01_01_0873 +
6836746-6836775,6836859-6836918,6837729-6837899,
6838308-6838407,6838619-6838710,6838825-6839013
Length = 213
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = +1
Query: 448 LQSFACAPVELVKTRQQLAKPSE--RMPSGAW 537
L C+P+EL +TR Q K S P G W
Sbjct: 71 LACITCSPIELARTRMQAFKVSNVGGKPPGMW 102
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,466,944
Number of Sequences: 37544
Number of extensions: 352103
Number of successful extensions: 822
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 815
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1257681096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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