Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_L17
(556 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75532-5|CAD56651.1| 360|Caenorhabditis elegans Hypothetical pr... 67 9e-12
Z75532-4|CAA99811.1| 310|Caenorhabditis elegans Hypothetical pr... 67 9e-12
Z75955-5|CAB00119.2| 285|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z81577-1|CAB04651.3| 289|Caenorhabditis elegans Hypothetical pr... 38 0.005
U23412-3|AAK21466.1| 301|Caenorhabditis elegans Hypothetical pr... 34 0.060
Z70310-10|CAA94371.2| 341|Caenorhabditis elegans Hypothetical p... 33 0.18
AL023841-13|CAA19513.2| 341|Caenorhabditis elegans Hypothetical... 33 0.18
X76114-1|CAA53720.1| 290|Caenorhabditis elegans Oxoglutarate/ma... 32 0.24
U23525-8|AAC46570.1| 290|Caenorhabditis elegans Hypothetical pr... 32 0.24
Z49207-2|CAA89069.1| 298|Caenorhabditis elegans Hypothetical pr... 31 0.42
Z48240-1|CAA88283.1| 312|Caenorhabditis elegans DIF-1 protein. 31 0.42
X76115-1|CAA53721.1| 312|Caenorhabditis elegans carrier protein... 31 0.42
U61949-5|AAB03153.2| 312|Caenorhabditis elegans Differentiation... 31 0.42
Z68160-3|CAA92291.1| 269|Caenorhabditis elegans Hypothetical pr... 31 0.56
Z49070-1|CAA88869.1| 384|Caenorhabditis elegans Hypothetical pr... 29 2.2
X76116-1|CAA53722.1| 384|Caenorhabditis elegans carrier protein... 29 2.2
AC024817-32|AAP13741.1| 543|Caenorhabditis elegans Hypothetical... 29 3.0
AC024817-31|AAP13742.1| 563|Caenorhabditis elegans Hypothetical... 29 3.0
Z92972-4|CAB07489.2| 337|Caenorhabditis elegans Hypothetical pr... 28 3.9
U49449-1|AAB00117.1| 339|Caenorhabditis elegans olfactory recep... 27 6.9
U42830-6|AAC48279.2| 339|Caenorhabditis elegans Odorant respons... 27 6.9
AL023842-4|CAA19517.2| 229|Caenorhabditis elegans Hypothetical ... 27 6.9
AF016450-10|AAB65990.1| 166|Caenorhabditis elegans Hypothetical... 27 6.9
Z48809-7|CAA88744.1| 367|Caenorhabditis elegans Hypothetical pr... 27 9.1
AF358857-1|AAK52772.1| 367|Caenorhabditis elegans REF-1 protein. 27 9.1
>Z75532-5|CAD56651.1| 360|Caenorhabditis elegans Hypothetical
protein C54G10.4b protein.
Length = 360
Score = 66.9 bits (156), Expect = 9e-12
Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Frame = +1
Query: 208 HPLDTLKVHIQSGRG------SPLECTKAIFKGGSLSNAYRGVWAPLGGIAAINAMVFGA 369
HPLDT+KV +Q+ G C K I + Y+G+ +PL ++AINA+VFG
Sbjct: 22 HPLDTVKVRLQTQSGPTPQYRGTFHCFKLIVQKEGFRGLYKGMSSPLLSLSAINAIVFGV 81
Query: 370 YGNTRRAMPNPDSLXXXXXXXXXXXXLQSFACAPVELVKTRQQL 501
+G T R M +PDS+ QS AP E +K Q+
Sbjct: 82 HGGTCRQMEDPDSITSHFVGGCAAGMAQSVIAAPTERIKLLLQI 125
>Z75532-4|CAA99811.1| 310|Caenorhabditis elegans Hypothetical
protein C54G10.4a protein.
Length = 310
Score = 66.9 bits (156), Expect = 9e-12
Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Frame = +1
Query: 208 HPLDTLKVHIQSGRG------SPLECTKAIFKGGSLSNAYRGVWAPLGGIAAINAMVFGA 369
HPLDT+KV +Q+ G C K I + Y+G+ +PL ++AINA+VFG
Sbjct: 22 HPLDTVKVRLQTQSGPTPQYRGTFHCFKLIVQKEGFRGLYKGMSSPLLSLSAINAIVFGV 81
Query: 370 YGNTRRAMPNPDSLXXXXXXXXXXXXLQSFACAPVELVKTRQQL 501
+G T R M +PDS+ QS AP E +K Q+
Sbjct: 82 HGGTCRQMEDPDSITSHFVGGCAAGMAQSVIAAPTERIKLLLQI 125
>Z75955-5|CAB00119.2| 285|Caenorhabditis elegans Hypothetical
protein R07B7.10 protein.
Length = 285
Score = 40.3 bits (90), Expect = 0.001
Identities = 31/130 (23%), Positives = 52/130 (40%), Gaps = 11/130 (8%)
Frame = +1
Query: 151 MAMDFXXXXXXXXXXXXXXHPLDTLKVHIQSGR--GSPLECTKAIFKGGSLSNAYRGVWA 324
M DF HPLDT+K +Q+ ++C K S+ Y+G++
Sbjct: 1 MYADFIAGWAAGGAGLLVGHPLDTVKARLQTMNIYKGIVDCMVKTMKQESVYGLYKGMFV 60
Query: 325 PLGGIAAINAMVFGAYGNTRRAMPNPDSLXXXXXXXXXXXXLQSFACA---------PVE 477
P A+++++F YG + + DS L + C PVE
Sbjct: 61 PFISTGALHSLLFAGYGAGLKFLNPGDSNVMARKDLPMSDILIASICGTLVQVGPVIPVE 120
Query: 478 LVKTRQQLAK 507
L+KT+ Q+ +
Sbjct: 121 LLKTKLQVQR 130
Score = 36.7 bits (81), Expect = 0.011
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Frame = +1
Query: 211 PLDTLKVHIQSGRG----SPLECTKAIFKGGSLSNAYRGVWA-PLGGIAAINAMVFGAYG 375
PL+ +K IQ+ + SP E T I++ L YRG WA L G +NA++F Y
Sbjct: 220 PLEVVKNRIQADKSHKTLSPKEMTLKIYREDGLRAFYRGGWAISLRGF-VVNAVIFVVYE 278
Query: 376 NT 381
NT
Sbjct: 279 NT 280
>Z81577-1|CAB04651.3| 289|Caenorhabditis elegans Hypothetical
protein R11.1 protein.
Length = 289
Score = 37.9 bits (84), Expect = 0.005
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 14/114 (12%)
Frame = +1
Query: 211 PLDTLKVHIQSGRGSPLE-------CTKAIFK--GGSLSNAYRGVWAPLGGIAAINAMVF 363
P + +KV +Q+ R S ++ + I++ G S YRG+ A LG A N + F
Sbjct: 117 PFEVVKVRLQADRNSSVKEQRSTASMAREIYRNEGFGTSGLYRGLGATLGRHGAWNMVYF 176
Query: 364 GAYGNTRRAMP----NPDS-LXXXXXXXXXXXXLQSFACAPVELVKTRQQLAKP 510
G Y + R +P NP S L L S P ++ K+R Q +P
Sbjct: 177 GLYHSCREVIPDAKQNPTSNLIGRIALGFTAGSLASIFNIPFDVAKSRIQGPQP 230
>U23412-3|AAK21466.1| 301|Caenorhabditis elegans Hypothetical
protein T10F2.2 protein.
Length = 301
Score = 34.3 bits (75), Expect = 0.060
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +1
Query: 211 PLDTLKVHIQSGRG---SPLECTKAIFKGGSLSNAYRGVWAPLGGIAAINAMVFGAYGNT 381
PLDT+KV +Q+ + + C K +K + Y G L A NA++F AYG
Sbjct: 42 PLDTVKVKVQTFPNLYSNWIVCLKDTYKLDGIRGLYAGTLPALAANVAENAVLFTAYGYC 101
Query: 382 RRAMPNPDSL 411
++ + + L
Sbjct: 102 QKTIATLNGL 111
>Z70310-10|CAA94371.2| 341|Caenorhabditis elegans Hypothetical
protein Y43C5B.3 protein.
Length = 341
Score = 32.7 bits (71), Expect = 0.18
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 214 LDTLKVHIQSGRGSPLECTKAIFKGGSLSNAYRGVWA 324
+D ++ H+++G G KAI+K + YRG WA
Sbjct: 179 IDGVRNHVKNGSGLGTSVIKAIYKTDGILGFYRGFWA 215
>AL023841-13|CAA19513.2| 341|Caenorhabditis elegans Hypothetical
protein Y43C5B.3 protein.
Length = 341
Score = 32.7 bits (71), Expect = 0.18
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 214 LDTLKVHIQSGRGSPLECTKAIFKGGSLSNAYRGVWA 324
+D ++ H+++G G KAI+K + YRG WA
Sbjct: 179 IDGVRNHVKNGSGLGTSVIKAIYKTDGILGFYRGFWA 215
>X76114-1|CAA53720.1| 290|Caenorhabditis elegans
Oxoglutarate/malate carrier protein protein.
Length = 290
Score = 32.3 bits (70), Expect = 0.24
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = +1
Query: 208 HPLDTLKVHIQSGRGSPL---ECTKAIFKGGSLSNAYRGVWAPLGGIAAINAMVFGAYGN 378
HPLD LKV +Q+ + L + + I+K + Y GV A + + FG Y
Sbjct: 27 HPLDLLKVQLQTQQQGKLTIGQLSLKIYKNDGILAFYNGVSASVLRQLTYSTTRFGIYET 86
Query: 379 TRRAMPNPDSL 411
++ +P L
Sbjct: 87 VKKQLPQDQPL 97
>U23525-8|AAC46570.1| 290|Caenorhabditis elegans Hypothetical
protein K11G12.5 protein.
Length = 290
Score = 32.3 bits (70), Expect = 0.24
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = +1
Query: 208 HPLDTLKVHIQSGRGSPL---ECTKAIFKGGSLSNAYRGVWAPLGGIAAINAMVFGAYGN 378
HPLD LKV +Q+ + L + + I+K + Y GV A + + FG Y
Sbjct: 27 HPLDLLKVQLQTQQQGKLTIGQLSLKIYKNDGILAFYNGVSASVLRQLTYSTTRFGIYET 86
Query: 379 TRRAMPNPDSL 411
++ +P L
Sbjct: 87 VKKQLPQDQPL 97
>Z49207-2|CAA89069.1| 298|Caenorhabditis elegans Hypothetical
protein R07E3.4 protein.
Length = 298
Score = 31.5 bits (68), Expect = 0.42
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +1
Query: 259 LECTKAIFKGGSLSNAYRGVWAPLGGIAAINAMVFGAYGNTRRAMPNPDSLXXXX--XXX 432
++C K I +++ Y+G+ + L + A A+ FG + + R ++ +P SL
Sbjct: 160 VDCLKKIKASEGVASWYKGLSSALQFVIASRAIFFGIFDSIRTSVEDPKSLNFAACWAIA 219
Query: 433 XXXXXLQSFACAPVELVK 486
C P++ V+
Sbjct: 220 QISITTSGMVCYPLDTVR 237
>Z48240-1|CAA88283.1| 312|Caenorhabditis elegans DIF-1 protein.
Length = 312
Score = 31.5 bits (68), Expect = 0.42
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 10/63 (15%)
Frame = +1
Query: 208 HPLDTLKVHIQS------GRG----SPLECTKAIFKGGSLSNAYRGVWAPLGGIAAINAM 357
HP DT+KV IQ+ G L+C K Y+G+ APL G++ + A+
Sbjct: 23 HPFDTVKVRIQTMPMPKPGEKPQFTGALDCVKRTVSKEGFFALYKGMAAPLVGVSPLFAV 82
Query: 358 VFG 366
FG
Sbjct: 83 FFG 85
Score = 31.1 bits (67), Expect = 0.56
Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 5/97 (5%)
Frame = +1
Query: 256 PLECTKAIFKGGSLSNAYRGVWAPLGGIAAINAMVFGAYGNTRRAMPNPDSLXXXX-XXX 432
PL+ K ++K G +S+ YRG A L +A Y ++ +
Sbjct: 149 PLDVVKKLYKQGGISSIYRGTGATLLRDIPASAAYLSVYEYLKKKFSGEGAQRTLSPGAT 208
Query: 433 XXXXXLQSFA----CAPVELVKTRQQLAKPSERMPSG 531
L A C P +++K+R Q A P + P G
Sbjct: 209 LMAGGLAGIANWGVCIPADVLKSRLQTA-PEGKYPDG 244
>X76115-1|CAA53721.1| 312|Caenorhabditis elegans carrier protein
(c1) protein.
Length = 312
Score = 31.5 bits (68), Expect = 0.42
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 10/63 (15%)
Frame = +1
Query: 208 HPLDTLKVHIQS------GRG----SPLECTKAIFKGGSLSNAYRGVWAPLGGIAAINAM 357
HP DT+KV IQ+ G L+C K Y+G+ APL G++ + A+
Sbjct: 23 HPFDTVKVRIQTMPMPKPGEKPQFTGALDCVKRTVSKEGFFALYKGMAAPLVGVSPLFAV 82
Query: 358 VFG 366
FG
Sbjct: 83 FFG 85
Score = 31.1 bits (67), Expect = 0.56
Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 5/97 (5%)
Frame = +1
Query: 256 PLECTKAIFKGGSLSNAYRGVWAPLGGIAAINAMVFGAYGNTRRAMPNPDSLXXXX-XXX 432
PL+ K ++K G +S+ YRG A L +A Y ++ +
Sbjct: 149 PLDVVKKLYKQGGISSIYRGTGATLLRDIPASAAYLSVYEYLKKKFSGEGAQRTLSPGAT 208
Query: 433 XXXXXLQSFA----CAPVELVKTRQQLAKPSERMPSG 531
L A C P +++K+R Q A P + P G
Sbjct: 209 LMAGGLAGIANWGVCIPADVLKSRLQTA-PEGKYPDG 244
>U61949-5|AAB03153.2| 312|Caenorhabditis elegans Differentiation
abnormal protein 1 protein.
Length = 312
Score = 31.5 bits (68), Expect = 0.42
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 10/63 (15%)
Frame = +1
Query: 208 HPLDTLKVHIQS------GRG----SPLECTKAIFKGGSLSNAYRGVWAPLGGIAAINAM 357
HP DT+KV IQ+ G L+C K Y+G+ APL G++ + A+
Sbjct: 23 HPFDTVKVRIQTMPMPKPGEKPQFTGALDCVKRTVSKEGFFALYKGMAAPLVGVSPLFAV 82
Query: 358 VFG 366
FG
Sbjct: 83 FFG 85
Score = 31.1 bits (67), Expect = 0.56
Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 5/97 (5%)
Frame = +1
Query: 256 PLECTKAIFKGGSLSNAYRGVWAPLGGIAAINAMVFGAYGNTRRAMPNPDSLXXXX-XXX 432
PL+ K ++K G +S+ YRG A L +A Y ++ +
Sbjct: 149 PLDVVKKLYKQGGISSIYRGTGATLLRDIPASAAYLSVYEYLKKKFSGEGAQRTLSPGAT 208
Query: 433 XXXXXLQSFA----CAPVELVKTRQQLAKPSERMPSG 531
L A C P +++K+R Q A P + P G
Sbjct: 209 LMAGGLAGIANWGVCIPADVLKSRLQTA-PEGKYPDG 244
>Z68160-3|CAA92291.1| 269|Caenorhabditis elegans Hypothetical
protein D1046.3 protein.
Length = 269
Score = 31.1 bits (67), Expect = 0.56
Identities = 31/108 (28%), Positives = 43/108 (39%), Gaps = 3/108 (2%)
Frame = +1
Query: 208 HPLDTLKVHIQSGRGSPLECTKAIFKGGSLSNAYRGVWAPLGGIAAINAMVFGAYGNTRR 387
+PLDT+K +QS +G G + YRG+ + L G A A+ F Y
Sbjct: 27 YPLDTIKSRMQSKQG--------FIAAGGFKDIYRGMISVLVGSAPGAAIFFLTYKYING 78
Query: 388 AMPNPDSLXXXXXXXXXXXXLQSFACA---PVELVKTRQQLAKPSERM 522
M + ACA P EL K R Q+ K +ER+
Sbjct: 79 QMKQVIEERNALVDAVSASLAEIAACAVRVPTELCKQRGQVNK-NERL 125
>Z49070-1|CAA88869.1| 384|Caenorhabditis elegans Hypothetical
protein T09F3.2 protein.
Length = 384
Score = 29.1 bits (62), Expect = 2.2
Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 5/80 (6%)
Frame = +1
Query: 277 IFKGGSLSNAYRGVWAPLGGIAAINAMVFGAYGNTRRAMPN-----PDSLXXXXXXXXXX 441
+ K + Y+G+ L G+A A+ F Y ++R P+S
Sbjct: 155 VIKTEGIGALYKGLIPNLVGVAPSKAVYFYTYSTSKRFWNESEVLIPNSAIVHMVSAGSA 214
Query: 442 XXLQSFACAPVELVKTRQQL 501
+ + A P+ LVKTR QL
Sbjct: 215 GFVAASAVNPIWLVKTRLQL 234
>X76116-1|CAA53722.1| 384|Caenorhabditis elegans carrier protein
(c2) protein.
Length = 384
Score = 29.1 bits (62), Expect = 2.2
Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 5/80 (6%)
Frame = +1
Query: 277 IFKGGSLSNAYRGVWAPLGGIAAINAMVFGAYGNTRRAMPN-----PDSLXXXXXXXXXX 441
+ K + Y+G+ L G+A A+ F Y ++R P+S
Sbjct: 155 VIKTEGIGALYKGLIPNLVGVAPSKAVYFYTYSTSKRFWNESEVLIPNSAIVHMVSAGSA 214
Query: 442 XXLQSFACAPVELVKTRQQL 501
+ + A P+ LVKTR QL
Sbjct: 215 GFVAASAVNPIWLVKTRLQL 234
>AC024817-32|AAP13741.1| 543|Caenorhabditis elegans Hypothetical
protein Y54G2A.17a protein.
Length = 543
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 13 SRRF*IRLHQYVYWHNVQWRQREFPLRLPDLNTGKTH 123
S+R + ++ + HNV W+ E LP LN K H
Sbjct: 459 SKRALVNANKIIKLHNVYWKDGEMITPLPTLNEIKEH 495
>AC024817-31|AAP13742.1| 563|Caenorhabditis elegans Hypothetical
protein Y54G2A.17b protein.
Length = 563
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 13 SRRF*IRLHQYVYWHNVQWRQREFPLRLPDLNTGKTH 123
S+R + ++ + HNV W+ E LP LN K H
Sbjct: 479 SKRALVNANKIIKLHNVYWKDGEMITPLPTLNEIKEH 515
>Z92972-4|CAB07489.2| 337|Caenorhabditis elegans Hypothetical
protein T19C9.4 protein.
Length = 337
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +2
Query: 455 ALRVHLSSWLKLVNNS-QNLVNVCLPAHGLA 544
A+ V L+SW NL NVC+ HGLA
Sbjct: 272 AMAVLLASWTGTYRQEWMNLSNVCIATHGLA 302
>U49449-1|AAB00117.1| 339|Caenorhabditis elegans olfactory receptor
Odr-10 protein.
Length = 339
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/69 (20%), Positives = 27/69 (39%)
Frame = +3
Query: 111 WKDTSH*SLAACNYGNGFYSWMHWRLCGYISWTSFRYIKSAYTVWERKSFGMH*SYLQRR 290
+ DT + A N N Y+W+ YI++ ++Y ++ + G Y
Sbjct: 154 YPDTEYTEAAVTNVLNNHYNWIKKENVSYIAYVYYQYENGVRHIYLKNLLGCFVHYFVMS 213
Query: 291 ITVECVSRC 317
+T + C
Sbjct: 214 MTFVVMFYC 222
>U42830-6|AAC48279.2| 339|Caenorhabditis elegans Odorant response
abnormal protein10 protein.
Length = 339
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/69 (20%), Positives = 27/69 (39%)
Frame = +3
Query: 111 WKDTSH*SLAACNYGNGFYSWMHWRLCGYISWTSFRYIKSAYTVWERKSFGMH*SYLQRR 290
+ DT + A N N Y+W+ YI++ ++Y ++ + G Y
Sbjct: 154 YPDTEYTEAAVTNVLNNHYNWIKKENVSYIAYVYYQYENGVRHIYLKNLLGCFVHYFVMS 213
Query: 291 ITVECVSRC 317
+T + C
Sbjct: 214 MTFVVMFYC 222
>AL023842-4|CAA19517.2| 229|Caenorhabditis elegans Hypothetical
protein Y44A6D.3 protein.
Length = 229
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 37 HQYVYWHNVQWRQREFPLRLPDLNTGKTHRIKA*PLAIMAMDF 165
H + +N+Q+ Q FP R PD + LA+M MDF
Sbjct: 97 HNHSKNNNIQYTQTVFPRRTPDDIVKHIQIAQITQLAMMKMDF 139
>AF016450-10|AAB65990.1| 166|Caenorhabditis elegans Hypothetical
protein B0238.12 protein.
Length = 166
Score = 27.5 bits (58), Expect = 6.9
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 7/58 (12%)
Frame = -2
Query: 537 PCAGRHTFTRFCELL---TSFNQLDRCTRKAL*CPCNCSSGCV----SRQRVRVRHCS 385
PC GR+ + C + N CT++ + C C SG V +RQ VR CS
Sbjct: 36 PCRGRNEEYKTCGTACEPSCTNPNPMCTKQCINNVCQCRSGYVRNEITRQCVRQAQCS 93
>Z48809-7|CAA88744.1| 367|Caenorhabditis elegans Hypothetical
protein T01E8.2 protein.
Length = 367
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -3
Query: 383 RVFP*APNTIAFIAAIPPKGAHTPRYAFDSDPP 285
R FP P +A +A PK +P Y+ DS PP
Sbjct: 300 RPFPFFPMPMAPMAT-SPKSQQSPSYSLDSPPP 331
>AF358857-1|AAK52772.1| 367|Caenorhabditis elegans REF-1 protein.
Length = 367
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -3
Query: 383 RVFP*APNTIAFIAAIPPKGAHTPRYAFDSDPP 285
R FP P +A +A PK +P Y+ DS PP
Sbjct: 300 RPFPFFPMPMAPMAT-SPKSQQSPSYSLDSPPP 331
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,515,248
Number of Sequences: 27780
Number of extensions: 285257
Number of successful extensions: 778
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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