Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_L17
(556 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 36 3e-04
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 36 3e-04
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 26 0.29
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 25 0.68
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 25 0.68
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 25 0.68
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 25 0.68
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.7
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 2.7
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 22 4.8
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 21 8.4
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 21 8.4
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 35.9 bits (79), Expect = 3e-04
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +1
Query: 265 CTKAIFKGGSLSNAYRGVWAPLGGIAAINAMVFGAYGNTRRAMPNP 402
C IFK ++ YRG + GI A FG Y R +P+P
Sbjct: 162 CLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPDP 207
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 35.9 bits (79), Expect = 3e-04
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +1
Query: 265 CTKAIFKGGSLSNAYRGVWAPLGGIAAINAMVFGAYGNTRRAMPNP 402
C IFK ++ YRG + GI A FG Y R +P+P
Sbjct: 162 CLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPDP 207
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 25.8 bits (54), Expect = 0.29
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -1
Query: 442 LQLLQRLRESSASPG*ALLDEYSHKLQTP 356
LQL++ LR+SSA G LL + S ++ P
Sbjct: 144 LQLIRNLRQSSALDGVTLLADNSVSIKDP 172
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 24.6 bits (51), Expect = 0.68
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -3
Query: 233 CTFNVSKGCPANIPAQPPMHP 171
CT + GC A + + P HP
Sbjct: 435 CTHTTTNGCTAELRKKEPPHP 455
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 24.6 bits (51), Expect = 0.68
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -3
Query: 233 CTFNVSKGCPANIPAQPPMHP 171
CT + GC A + + P HP
Sbjct: 421 CTHTTTNGCTAELRKKEPPHP 441
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 24.6 bits (51), Expect = 0.68
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -3
Query: 233 CTFNVSKGCPANIPAQPPMHP 171
CT + GC A + + P HP
Sbjct: 455 CTHTTTNGCTAELRKKEPPHP 475
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 24.6 bits (51), Expect = 0.68
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -3
Query: 233 CTFNVSKGCPANIPAQPPMHP 171
CT + GC A + + P HP
Sbjct: 404 CTHTTTNGCTAELRKKEPPHP 424
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 2.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 528 GRHTFTRFCELLTSFNQLDR 469
GRH ELL+S+N L+R
Sbjct: 52 GRHEKRLLNELLSSYNTLER 71
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 2.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 528 GRHTFTRFCELLTSFNQLDR 469
GRH ELL+S+N L+R
Sbjct: 52 GRHEKRLLNELLSSYNTLER 71
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.8 bits (44), Expect = 4.8
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +3
Query: 411 DDSRNRWSSCRGTTE 455
++S NR +SC G+TE
Sbjct: 370 NESENRRNSCLGSTE 384
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.0 bits (42), Expect = 8.4
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = -2
Query: 393 HCSTSIPISSKHHSVYCRY 337
+C + PI H+V C Y
Sbjct: 325 YCISGAPIERPDHAVLCVY 343
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 21.0 bits (42), Expect = 8.4
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -3
Query: 257 GLPLPDCICTFNVSKGCPANIPAQPPMHP 171
GL PD T S G P+ I A HP
Sbjct: 332 GLQPPDLAGTSQGSAGLPSAILAMRLSHP 360
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,895
Number of Sequences: 438
Number of extensions: 3162
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15949830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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