Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_L16
         (586 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68227-12|CAA92517.2|   86|Caenorhabditis elegans Hypothetical p...   102   2e-22
Z71265-2|CAA95834.2|  128|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z83229-2|CAB05739.1| 1589|Caenorhabditis elegans Hypothetical pr...    28   5.6  
Z74472-5|CAA98943.1|  802|Caenorhabditis elegans Hypothetical pr...    27   9.8  
U70849-11|AAK29800.1|  897|Caenorhabditis elegans Hypothetical p...    27   9.8  
U70849-10|AAK29799.1|  910|Caenorhabditis elegans Hypothetical p...    27   9.8  
AL031635-7|CAB54384.2|  487|Caenorhabditis elegans Hypothetical ...    27   9.8  

>Z68227-12|CAA92517.2|   86|Caenorhabditis elegans Hypothetical
           protein F49C12.13 protein.
          Length = 86

 Score =  102 bits (244), Expect = 2e-22
 Identities = 37/78 (47%), Positives = 57/78 (73%)
 Frame = +2

Query: 62  VPITIFTVFWGVIGIVCPFFAPKGPNRGIIQVILILTAATCWLFWLCAYMAQMNPLIGPR 241
           +P+   + FW +IG   P+  PKGPNRGIIQ+++I+TA  CW+FW+  ++ Q+NPLIGP+
Sbjct: 5   IPLVSVSAFWAIIGFGGPWIVPKGPNRGIIQLMIIMTAVCCWMFWIMVFLHQLNPLIGPQ 64

Query: 242 LDNETLIWISRTWGNPMN 295
           ++ +T+ WIS  WG+  N
Sbjct: 65  INVKTIRWISEKWGDAPN 82


>Z71265-2|CAA95834.2|  128|Caenorhabditis elegans Hypothetical
           protein M05B5.2 protein.
          Length = 128

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
 Frame = +2

Query: 110 CPFFAPKGPNRGIIQ----VILILTAATCWLFWLCAYMAQM 220
           C F  P G    II     ++L+L A +CW  W C    Q+
Sbjct: 82  CQFAIPTGAVVAIILAAIVLLLVLIAMSCWCCWCCPLYKQL 122


>Z83229-2|CAB05739.1| 1589|Caenorhabditis elegans Hypothetical protein
            F54F11.2 protein.
          Length = 1589

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 314  SFTPWSCSLGCPKCVRSR*ESHCQVWV 234
            +F  +  +  CP   +S  E HC+VWV
Sbjct: 1558 NFPAFQTAFNCPLGSKSAPEQHCEVWV 1584


>Z74472-5|CAA98943.1|  802|Caenorhabditis elegans Hypothetical
           protein F23H12.5 protein.
          Length = 802

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = -3

Query: 395 IIYLFIRN-DRFITWTYYTKEVSSSLWTSFTPWS-CS 291
           +++LF+ +   F T  Y    V SS W+ ++PWS CS
Sbjct: 5   LLFLFLMSLMAFTTSQYEPLSVISSSWSMWSPWSFCS 41


>U70849-11|AAK29800.1|  897|Caenorhabditis elegans Hypothetical
           protein F29B9.2b protein.
          Length = 897

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 25/88 (28%), Positives = 43/88 (48%)
 Frame = -1

Query: 367 DLLHGLITLKRCLLLFGQVLHLGPVHWVAPSA*DPDESLIVKSGSDEWVHLRHVSAQPE* 188
           D+ +G +  KR ++  GQ L L P  W+  +   P +SL+       ++HL ++  Q   
Sbjct: 542 DIANGAV--KRVVIKEGQTL-LIPAGWIH-AVLTPVDSLVF---GGNFLHLGNLEMQMR- 593

Query: 187 PTCCCS*YQYHLDNPSVRSLRSEERTYY 104
                    YHL+N   + +RSEE+ Y+
Sbjct: 594 --------VYHLENAIRKEIRSEEKFYF 613


>U70849-10|AAK29799.1|  910|Caenorhabditis elegans Hypothetical
           protein F29B9.2a protein.
          Length = 910

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 25/88 (28%), Positives = 43/88 (48%)
 Frame = -1

Query: 367 DLLHGLITLKRCLLLFGQVLHLGPVHWVAPSA*DPDESLIVKSGSDEWVHLRHVSAQPE* 188
           D+ +G +  KR ++  GQ L L P  W+  +   P +SL+       ++HL ++  Q   
Sbjct: 555 DIANGAV--KRVVIKEGQTL-LIPAGWIH-AVLTPVDSLVF---GGNFLHLGNLEMQMR- 606

Query: 187 PTCCCS*YQYHLDNPSVRSLRSEERTYY 104
                    YHL+N   + +RSEE+ Y+
Sbjct: 607 --------VYHLENAIRKEIRSEEKFYF 626


>AL031635-7|CAB54384.2|  487|Caenorhabditis elegans Hypothetical
           protein Y47D3B.11 protein.
          Length = 487

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +3

Query: 216 R*THSSDPDLTMRLSSGSHALGATQ*TGPRCKTCPKRRR 332
           R TH   P  T      SH   + Q T PR ++CP+RR+
Sbjct: 411 RTTHHLIPSSTR---PSSHQRPSLQPTAPRTRSCPRRRQ 446


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,138,088
Number of Sequences: 27780
Number of extensions: 278911
Number of successful extensions: 735
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 734
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)