Samia BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_L15
         (473 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC24B10.19c |||sequence orphan|Schizosaccharomyces pombe|chr 3...    29   0.27 
SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces pombe...    27   1.1  
SPCC4E9.02 |cig1|SPCC645.01|cyclin Cig1|Schizosaccharomyces pomb...    26   3.4  
SPCC1322.13 |ade6|min1|phosphoribosylaminoimidazole carboxylase ...    26   3.4  
SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces pom...    26   3.4  
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy...    26   3.4  
SPAC9E9.04 |||bcap family homolog|Schizosaccharomyces pombe|chr ...    25   7.8  
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S...    25   7.8  
SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces pomb...    25   7.8  
SPAC3F10.16c |||GTP binding protein, HSR1-related|Schizosaccharo...    25   7.8  

>SPCC24B10.19c |||sequence orphan|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 455

 Score = 29.5 bits (63), Expect = 0.27
 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
 Frame = -3

Query: 402 ITESYRYLKSTHEHGNKPENSIKVYVRAMDISTW--TLAELNEAIANPATNPELIHYLET 229
           ++E   +LK  H   + PE  +K+      + TW      LN+AI+N  +N       + 
Sbjct: 381 LSELIDFLKREHPPEDTPEKRVKIKRIRTLLDTWQQEWRILNKAISNAESNS---GRGQN 437

Query: 228 ARTKLTSESEFQNKET 181
           ++TK TS +  +NK T
Sbjct: 438 SKTKTTSVNLSRNKRT 453


>SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 871

 Score = 27.5 bits (58), Expect = 1.1
 Identities = 14/66 (21%), Positives = 35/66 (53%)
 Frame = -3

Query: 465 TMEELDEAIKDPSTNPNXLPAITESYRYLKSTHEHGNKPENSIKVYVRAMDISTWTLAEL 286
           T+ +++ A+++ ST+ +  P  +    Y++      N+P +S+ V  +  ++  W+  E+
Sbjct: 202 TITDIETALQNMSTSASRTPNDSSPLPYIE------NRPASSLAVSEKIQNVPNWSTEEV 255

Query: 285 NEAIAN 268
            E + N
Sbjct: 256 VEWLMN 261


>SPCC4E9.02 |cig1|SPCC645.01|cyclin Cig1|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 415

 Score = 25.8 bits (54), Expect = 3.4
 Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -3

Query: 267 PATNPELIHYLETARTKLTSESEFQN-KETISIVTKVGLVHKVPNLQ 130
           P  +PE+ HY+++   KL     + + ++ I  VT+  LV  +  +Q
Sbjct: 161 PDYDPEIFHYMQSLERKLAPPPNYMSVQQEIDWVTRHMLVDWIVQVQ 207


>SPCC1322.13 |ade6|min1|phosphoribosylaminoimidazole carboxylase
           Ade6|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 552

 Score = 25.8 bits (54), Expect = 3.4
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -3

Query: 261 TNPELIHYLETARTKLTSESEFQNKETISIVTKVGLVHKVP 139
           T+P+ I  L    T LT+E E  N + ++ VTK   V   P
Sbjct: 55  TDPDAIVELSKKCTLLTTEIEHINTDALAAVTKSVAVEPSP 95


>SPAC1565.04c |ste4||adaptor protein Ste4|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 264

 Score = 25.8 bits (54), Expect = 3.4
 Identities = 23/100 (23%), Positives = 42/100 (42%), Gaps = 1/100 (1%)
 Frame = -3

Query: 450 DEAIKDPSTNPNXLPAITESYRYLKSTHEHGNKPENSIKVYVRAMDISTWTLAELNEAIA 271
           D  I+      + L AI    +  K   +  NK +      ++ ++ S   L E  E ++
Sbjct: 51  DMGIESVGHRIDILSAIQSMKKQQKDKLQQENKDQE-----LKNIEESYKKLEEKTEHLS 105

Query: 270 NPATNPEL-IHYLETARTKLTSESEFQNKETISIVTKVGL 154
           +   + E  + YLET  TKL       N E + ++ K+ +
Sbjct: 106 DDNVSLEKRVEYLETENTKLVKTLNSLNSEFLQLLRKIAI 145


>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 573

 Score = 25.8 bits (54), Expect = 3.4
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -3

Query: 456 ELDEAIKDPSTNPNXLPAITESYRYLKSTHEHGNKPENSIKVY 328
           E DE +K+PS           S  YL  ++   N+PEN  K +
Sbjct: 282 EDDELVKNPSVTKGHPEIHESSENYLSRSNTVENEPENIEKQF 324


>SPAC9E9.04 |||bcap family homolog|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 188

 Score = 24.6 bits (51), Expect = 7.8
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = -3

Query: 345 NSIKVYVRAMDISTWTLAELNEAIANPATNPELIHYLETARTKL-TSESEFQN-KETISI 172
           N   + + AM  +   +  L   +     N + +  LET RTKL T + E++   E  + 
Sbjct: 118 NRYYLALEAMIAAQDKMQALQTQVEASTNNAKAVEELETLRTKLETRDKEYETLAEKYAA 177

Query: 171 VTK 163
           VTK
Sbjct: 178 VTK 180


>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
            Tor2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 2337

 Score = 24.6 bits (51), Expect = 7.8
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -3

Query: 459  EELDEAIKDPSTNPNXLPAITESYRYLKSTHEHGNKP 349
            EEL ++I+   T+P+  P I +    L    EH +KP
Sbjct: 1185 EELVKSIEIALTSPHISPEIIQILLNLAEFMEHDDKP 1221


>SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 923

 Score = 24.6 bits (51), Expect = 7.8
 Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
 Frame = -3

Query: 441  IKDPSTNPNXLPAITESYRYLK--STHEHGNKPENSIKV-YVRAMDISTWTLA-ELNEAI 274
            +KD  +NP   P  + S ++LK    + +G +   SIK+  +   +++ W ++ + +  I
Sbjct: 856  MKDSHSNPPVSPKYSSSQKHLKVERINIYGEQTRKSIKIRKIIDSEVTEWDVSVDDSGCI 915

Query: 273  ANP 265
             NP
Sbjct: 916  RNP 918


>SPAC3F10.16c |||GTP binding protein,
           HSR1-related|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 616

 Score = 24.6 bits (51), Expect = 7.8
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -3

Query: 276 IANPATNPELIHYLETARTKLTSESEFQNKETISI 172
           I NP  NP L+   E AR+K   E   +NK+ ++I
Sbjct: 79  IQNPEQNPFLLSKEEAARSKQKQE---KNKDRLTI 110


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,577,506
Number of Sequences: 5004
Number of extensions: 28307
Number of successful extensions: 81
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 81
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 182448900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)