Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_L13
(524 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC100827-1|AAI00828.1| 727|Homo sapiens synaptic vesicle glycop... 30 4.3
BC100826-1|AAI00827.1| 727|Homo sapiens synaptic vesicle glycop... 30 4.3
BC100825-1|AAI00826.1| 727|Homo sapiens synaptic vesicle glycop... 30 4.3
BC100824-1|AAI00825.1| 727|Homo sapiens synaptic vesicle glycop... 30 4.3
AB007890-1|BAA24860.3| 1506|Homo sapiens KIAA0430 protein protein. 30 4.3
U95740-1|AAC31662.1| 1199|Homo sapiens Unknown gene product prot... 29 10.0
BC091500-1|AAH91500.1| 829|Homo sapiens ODF2 protein protein. 29 10.0
AY319414-1|AAP83847.1| 657|Homo sapiens outer dense fiber of sp... 29 10.0
AL445287-4|CAH71067.1| 638|Homo sapiens outer dense fiber of sp... 29 10.0
AL359091-21|CAI13504.1| 205|Homo sapiens outer dense fiber of s... 29 10.0
AL359091-20|CAI13503.1| 180|Homo sapiens outer dense fiber of s... 29 10.0
AL359091-19|CAI13502.1| 156|Homo sapiens outer dense fiber of s... 29 10.0
AL359091-18|CAI13501.1| 141|Homo sapiens outer dense fiber of s... 29 10.0
AL359091-17|CAI13500.1| 638|Homo sapiens outer dense fiber of s... 29 10.0
AF012549-1|AAB66337.1| 638|Homo sapiens outer dense fiber prote... 29 10.0
>BC100827-1|AAI00828.1| 727|Homo sapiens synaptic vesicle
glycoprotein 2C protein.
Length = 727
Score = 30.3 bits (65), Expect = 4.3
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +3
Query: 54 VSPKTYHFKTKDVDAVFVERQKKVLSLFQDVDQVNVDDEYYKIGKDYDVEANID 215
V +T + VD E ++ S FQD + DD+YY G+ Y+ EAN D
Sbjct: 22 VKKQTVKKVNQAVDRAQDEYTQRSYSRFQDEED---DDDYYPAGETYNGEANDD 72
>BC100826-1|AAI00827.1| 727|Homo sapiens synaptic vesicle
glycoprotein 2C protein.
Length = 727
Score = 30.3 bits (65), Expect = 4.3
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +3
Query: 54 VSPKTYHFKTKDVDAVFVERQKKVLSLFQDVDQVNVDDEYYKIGKDYDVEANID 215
V +T + VD E ++ S FQD + DD+YY G+ Y+ EAN D
Sbjct: 22 VKKQTVKKVNQAVDRAQDEYTQRSYSRFQDEED---DDDYYPAGETYNGEANDD 72
>BC100825-1|AAI00826.1| 727|Homo sapiens synaptic vesicle
glycoprotein 2C protein.
Length = 727
Score = 30.3 bits (65), Expect = 4.3
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +3
Query: 54 VSPKTYHFKTKDVDAVFVERQKKVLSLFQDVDQVNVDDEYYKIGKDYDVEANID 215
V +T + VD E ++ S FQD + DD+YY G+ Y+ EAN D
Sbjct: 22 VKKQTVKKVNQAVDRAQDEYTQRSYSRFQDEED---DDDYYPAGETYNGEANDD 72
>BC100824-1|AAI00825.1| 727|Homo sapiens synaptic vesicle
glycoprotein 2C protein.
Length = 727
Score = 30.3 bits (65), Expect = 4.3
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +3
Query: 54 VSPKTYHFKTKDVDAVFVERQKKVLSLFQDVDQVNVDDEYYKIGKDYDVEANID 215
V +T + VD E ++ S FQD + DD+YY G+ Y+ EAN D
Sbjct: 22 VKKQTVKKVNQAVDRAQDEYTQRSYSRFQDEED---DDDYYPAGETYNGEANDD 72
>AB007890-1|BAA24860.3| 1506|Homo sapiens KIAA0430 protein protein.
Length = 1506
Score = 30.3 bits (65), Expect = 4.3
Identities = 14/62 (22%), Positives = 28/62 (45%)
Frame = +3
Query: 285 YEFSIFYQKLREEAIALFHLFYYAKDFETFYKSAAFARVHLNEGQFLYAYYIAVIQRNDT 464
Y +F EE + L L+ +AK+ + + + ++ L+E Y Y+ + T
Sbjct: 1232 YLVEVFTNDKMEECVKLTSLYLFAKNVRSLLHTYHYQQIFLHEFSMAYTKYVGETLQPKT 1291
Query: 465 HG 470
+G
Sbjct: 1292 YG 1293
>U95740-1|AAC31662.1| 1199|Homo sapiens Unknown gene product protein.
Length = 1199
Score = 29.1 bits (62), Expect = 10.0
Identities = 13/58 (22%), Positives = 27/58 (46%)
Frame = +3
Query: 297 IFYQKLREEAIALFHLFYYAKDFETFYKSAAFARVHLNEGQFLYAYYIAVIQRNDTHG 470
+F EE + L L+ +AK+ + + + ++ L+E Y Y+ + T+G
Sbjct: 924 VFTNDKMEECVKLTSLYLFAKNVRSLLHTYHYQQIFLHEFSMAYTKYVGETLQPKTYG 981
>BC091500-1|AAH91500.1| 829|Homo sapiens ODF2 protein protein.
Length = 829
Score = 29.1 bits (62), Expect = 10.0
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +2
Query: 14 SSSGAHCPRAIQCGVTENVSLQDKRCRRSVCGAP 115
SSSG PR CG SL K+ R+ CGAP
Sbjct: 4 SSSGGS-PRFPSCGKNGVTSLTQKKVLRAPCGAP 36
>AY319414-1|AAP83847.1| 657|Homo sapiens outer dense fiber of sperm
tails 2 isoform 3 protein.
Length = 657
Score = 29.1 bits (62), Expect = 10.0
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +2
Query: 14 SSSGAHCPRAIQCGVTENVSLQDKRCRRSVCGAP 115
SSSG PR CG SL K+ R+ CGAP
Sbjct: 4 SSSGGS-PRFPSCGKNGVTSLTQKKVLRAPCGAP 36
>AL445287-4|CAH71067.1| 638|Homo sapiens outer dense fiber of sperm
tails 2 protein.
Length = 638
Score = 29.1 bits (62), Expect = 10.0
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +2
Query: 14 SSSGAHCPRAIQCGVTENVSLQDKRCRRSVCGAP 115
SSSG PR CG SL K+ R+ CGAP
Sbjct: 4 SSSGGS-PRFPSCGKNGVTSLTQKKVLRAPCGAP 36
>AL359091-21|CAI13504.1| 205|Homo sapiens outer dense fiber of
sperm tails 2 protein.
Length = 205
Score = 29.1 bits (62), Expect = 10.0
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +2
Query: 14 SSSGAHCPRAIQCGVTENVSLQDKRCRRSVCGAP 115
SSSG PR CG SL K+ R+ CGAP
Sbjct: 4 SSSGGS-PRFPSCGKNGVTSLTQKKVLRAPCGAP 36
>AL359091-20|CAI13503.1| 180|Homo sapiens outer dense fiber of
sperm tails 2 protein.
Length = 180
Score = 29.1 bits (62), Expect = 10.0
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +2
Query: 14 SSSGAHCPRAIQCGVTENVSLQDKRCRRSVCGAP 115
SSSG PR CG SL K+ R+ CGAP
Sbjct: 4 SSSGGS-PRFPSCGKNGVTSLTQKKVLRAPCGAP 36
>AL359091-19|CAI13502.1| 156|Homo sapiens outer dense fiber of
sperm tails 2 protein.
Length = 156
Score = 29.1 bits (62), Expect = 10.0
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +2
Query: 14 SSSGAHCPRAIQCGVTENVSLQDKRCRRSVCGAP 115
SSSG PR CG SL K+ R+ CGAP
Sbjct: 4 SSSGGS-PRFPSCGKNGVTSLTQKKVLRAPCGAP 36
>AL359091-18|CAI13501.1| 141|Homo sapiens outer dense fiber of
sperm tails 2 protein.
Length = 141
Score = 29.1 bits (62), Expect = 10.0
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +2
Query: 14 SSSGAHCPRAIQCGVTENVSLQDKRCRRSVCGAP 115
SSSG PR CG SL K+ R+ CGAP
Sbjct: 4 SSSGGS-PRFPSCGKNGVTSLTQKKVLRAPCGAP 36
>AL359091-17|CAI13500.1| 638|Homo sapiens outer dense fiber of
sperm tails 2 protein.
Length = 638
Score = 29.1 bits (62), Expect = 10.0
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +2
Query: 14 SSSGAHCPRAIQCGVTENVSLQDKRCRRSVCGAP 115
SSSG PR CG SL K+ R+ CGAP
Sbjct: 4 SSSGGS-PRFPSCGKNGVTSLTQKKVLRAPCGAP 36
>AF012549-1|AAB66337.1| 638|Homo sapiens outer dense fiber protein
2 protein.
Length = 638
Score = 29.1 bits (62), Expect = 10.0
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +2
Query: 14 SSSGAHCPRAIQCGVTENVSLQDKRCRRSVCGAP 115
SSSG PR CG SL K+ R+ CGAP
Sbjct: 4 SSSGGS-PRFPSCGKNGVTSLTQKKVLRAPCGAP 36
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,141,362
Number of Sequences: 237096
Number of extensions: 1436537
Number of successful extensions: 2843
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2843
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5046825278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -