Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_L12
         (552 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    26   0.29 
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     24   0.89 
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    23   2.1  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 25.8 bits (54), Expect = 0.29
 Identities = 17/62 (27%), Positives = 28/62 (45%)
 Frame = +2

Query: 299 CGYNNPNGIGFTLIGDKIGAASQFGEFPWVVAXMNGRNFSYIGVGVLIHPQVVITAAHIV 478
           CG+ NP+ I    +G   G  +   EFP +           I    +I  + V+TAAH +
Sbjct: 153 CGWKNPSRI----VG---GTNTGINEFPMMAGIKRTYEPGMICGATIISKRYVLTAAHCI 205

Query: 479 LN 484
           ++
Sbjct: 206 ID 207


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 24.2 bits (50), Expect = 0.89
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = +2

Query: 407 RNFSYIGVGVLIHPQVVITAAHIVLNYKDFPTTINVRAGEV 529
           + F Y+   + I PQ  +T + +  NY +   ++N   GE+
Sbjct: 461 QQFPYVHDTLQIQPQEQLTLSKVTSNYHEEFQSLNNAVGEM 501


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 476 VLNYKDFPTTINVRAGEVG 532
           +L Y   P+T+NV +G+ G
Sbjct: 81  ILRYDGVPSTLNVISGKTG 99


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,751
Number of Sequences: 438
Number of extensions: 2187
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)