Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_L11
(497 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53765| Best HMM Match : 3HCDH_N (HMM E-Value=9.2e-12) 42 2e-04
SB_21667| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 7e-04
SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_8863| Best HMM Match : DAO (HMM E-Value=0.04) 32 0.23
SB_22397| Best HMM Match : DAO (HMM E-Value=7.6e-06) 31 0.70
SB_15161| Best HMM Match : MAP1B_neuraxin (HMM E-Value=2.7) 31 0.70
SB_57609| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.92
SB_44095| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_9370| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_58552| Best HMM Match : UbiD (HMM E-Value=1.1) 28 4.9
SB_17988| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_46409| Best HMM Match : EGF_2 (HMM E-Value=0.011) 27 6.5
SB_39421| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_26220| Best HMM Match : EGF_2 (HMM E-Value=0.011) 27 6.5
SB_45640| Best HMM Match : Epimerase (HMM E-Value=9.4e-38) 27 8.6
SB_38953| Best HMM Match : 7tm_1 (HMM E-Value=1.4) 27 8.6
SB_14751| Best HMM Match : DUF1602 (HMM E-Value=1.9) 27 8.6
>SB_53765| Best HMM Match : 3HCDH_N (HMM E-Value=9.2e-12)
Length = 120
Score = 42.3 bits (95), Expect = 2e-04
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 308 ECVPENLELKKKVFQNLDNVVDDN-TIXXXXXXXXXXXXXXENMKHKAQVIVSH 466
EC PENLELKKKVFQNL+ + + I E+++ + + IV+H
Sbjct: 1 ECTPENLELKKKVFQNLEATLSSSEVILASSTSCIMPSKFTESLQLRQRCIVAH 54
>SB_21667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 812
Score = 40.7 bits (91), Expect = 7e-04
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Frame = +2
Query: 56 VGIVGSGLIGRSWAMLFASVGYQVTLFDVVEKQITDAIADIKVQLKTLEKDGLLRGNLNA 235
V ++G+GL+G A A G +V L+D Q + ++ +Q +K+ L R + A
Sbjct: 8 VAVIGAGLMGTCIAGELAYHGARVNLYD-RSAQAMEKSKEMLIQ----QKEQLKREEVMA 62
Query: 236 DEQFQCVKGTCD-LAIAVKDAIFVQECVPENLELKKKVFQNLDNVVDDNTI 385
F C+ L AV ++ + E ENLE+KK VF+++ N +
Sbjct: 63 TSDFIGTVAFCESLEEAVVNSGLIFEATIENLEVKKSVFKSISQFCRTNAV 113
>SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6489
Score = 33.1 bits (72), Expect = 0.13
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +2
Query: 212 LLRGNLNADEQFQ--CVKGTCDLAIAVKDAIFVQECVPENL 328
LLR + DE + C++ CD+A+ V D F+ +CV ++L
Sbjct: 806 LLRDTNDTDECMKECCLRDECDVAVMVSDYCFMADCVSDSL 846
>SB_8863| Best HMM Match : DAO (HMM E-Value=0.04)
Length = 485
Score = 32.3 bits (70), Expect = 0.23
Identities = 14/29 (48%), Positives = 20/29 (68%)
Frame = +2
Query: 53 KVGIVGSGLIGRSWAMLFASVGYQVTLFD 139
+V IVG GL+G A+ FA GY+V L++
Sbjct: 165 EVAIVGGGLVGALSAVFFAKRGYKVDLYE 193
>SB_22397| Best HMM Match : DAO (HMM E-Value=7.6e-06)
Length = 456
Score = 30.7 bits (66), Expect = 0.70
Identities = 12/35 (34%), Positives = 24/35 (68%)
Frame = +2
Query: 29 MASKFKSEKVGIVGSGLIGRSWAMLFASVGYQVTL 133
++S F ++V ++G+G+IG + A + GY+VT+
Sbjct: 13 LSSPFGGQRVLVIGAGVIGLTTAYELLTAGYEVTV 47
>SB_15161| Best HMM Match : MAP1B_neuraxin (HMM E-Value=2.7)
Length = 210
Score = 30.7 bits (66), Expect = 0.70
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -3
Query: 141 TSNKVTWYPTEANNIAHDLPISPLPTIPTFSDLNL 37
TS K +WYP N D+P+S LP+I S + L
Sbjct: 55 TSEKNSWYPNPEN----DIPLSTLPSIQPLSKVKL 85
>SB_57609| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 416
Score = 30.3 bits (65), Expect = 0.92
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 53 KVGIVGSGLIGRSWAMLFASVGYQVTLFDVVE 148
KVGIVGSG+ G S A L G +V L++ E
Sbjct: 2 KVGIVGSGIAGLSAAWLLTLRGNEVHLYEKQE 33
>SB_44095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3051
Score = 29.1 bits (62), Expect = 2.1
Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 15/88 (17%)
Frame = +2
Query: 110 SVGYQVTLFDVVEKQITDAIADIK-VQLKTLEKDGLLRGNLNADE--------------Q 244
S Y + V +++ +A+ K Q +E D L+G +NA + Q
Sbjct: 1981 SAFYNPKIAFVTHRKVFEAVISHKRCQSSVIENDVTLQGGINAGKFTDLGQMTDMQECVQ 2040
Query: 245 FQCVKGTCDLAIAVKDAIFVQECVPENL 328
C K TCD+A ++D + C+ L
Sbjct: 2041 RCCAKSTCDVAFMLEDECYGVSCISNTL 2068
>SB_9370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +2
Query: 44 KSEKVGIVGSGLIGRSWAMLFASVGYQVTLFDVVEK 151
KS KV IVGSG+ G A S G VT+ + E+
Sbjct: 249 KSPKVIIVGSGIAGLMAARQLQSFGIDVTMVEARER 284
>SB_58552| Best HMM Match : UbiD (HMM E-Value=1.1)
Length = 409
Score = 27.9 bits (59), Expect = 4.9
Identities = 26/106 (24%), Positives = 51/106 (48%)
Frame = +2
Query: 56 VGIVGSGLIGRSWAMLFASVGYQVTLFDVVEKQITDAIADIKVQLKTLEKDGLLRGNLNA 235
VG+VG+G++ R A + L + + I++ ++ K L+ DG + +
Sbjct: 288 VGVVGAGVVSRGLTGKVAKHEDTMVLAESKKNSISELVS------KALQ-DGRI-----S 335
Query: 236 DEQFQCVKGTCDLAIAVKDAIFVQECVPENLELKKKVFQNLDNVVD 373
DE+F+ + + +KDAI + + + +L V +L N+VD
Sbjct: 336 DEEFRLILQEQERYNTLKDAIRARHGLAPHYDLPNIVDYDLPNIVD 381
>SB_17988| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 53
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 254 VKGTCDLAIAVKDAIFVQECVPENLELKKKVFQNLD 361
+K + D+ +V DA V E + ENL K K+F LD
Sbjct: 13 LKISLDVPGSVADADLVIEAIVENLRTKHKLFTALD 48
>SB_46409| Best HMM Match : EGF_2 (HMM E-Value=0.011)
Length = 323
Score = 27.5 bits (58), Expect = 6.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 251 CVKGTCDLAIAVKDAIFVQECVPENL 328
C + TCD+A +KD + EC + L
Sbjct: 176 CDRDTCDVAFYLKDTCYSVECYADEL 201
>SB_39421| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1810
Score = 27.5 bits (58), Expect = 6.5
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = -3
Query: 231 FRFPLRSPSFSKVFNCTLISAIASVICFSTTSNKVTWYPTEANNIAHDLPISPLPTIPTF 52
+ FPL KV + + S+IAS + S S W P+ A + L +SP+ P
Sbjct: 672 YPFPLEPGWGLKVVSASSSSSIASSVPSSMYSGPTPWIPSSA--ARYTLAVSPMLQSPRS 729
Query: 51 S 49
S
Sbjct: 730 S 730
>SB_26220| Best HMM Match : EGF_2 (HMM E-Value=0.011)
Length = 353
Score = 27.5 bits (58), Expect = 6.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 251 CVKGTCDLAIAVKDAIFVQECVPENL 328
C + TCD+A +KD + EC + L
Sbjct: 187 CDRDTCDVAFYLKDTCYSVECYADEL 212
>SB_45640| Best HMM Match : Epimerase (HMM E-Value=9.4e-38)
Length = 451
Score = 27.1 bits (57), Expect = 8.6
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Frame = +2
Query: 68 GSGLIGRSWAMLFASVGYQVTLFDVVEKQITDAI-ADIKVQLKTLEKDGLLRGNLNADEQ 244
G+G +G S + GY+VT++D I+ +L+ + D L G+L+
Sbjct: 148 GAGYLGSSLVPILLDQGYKVTVYDRFLWGISSLYPCASNPRLQIINGDILDVGHLS---- 203
Query: 245 FQCVKGTCDLAIAVKDAIFVQECVPENLELKKKVFQNLDNVVD 373
QC+ CD I + + C + + + Q NVVD
Sbjct: 204 -QCI-SECDAVIHLASIVGYPACEKDPQKATEVNEQGTRNVVD 244
>SB_38953| Best HMM Match : 7tm_1 (HMM E-Value=1.4)
Length = 324
Score = 27.1 bits (57), Expect = 8.6
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +1
Query: 19 ACRHGFQV*IGKSWNCWEWTDREIMGY--VVRFSRIPSNFVRC 141
AC H F +G S W+W R+ +GY V+R S RC
Sbjct: 11 ACHHFFHFFVGASGARWQWL-RQCVGYTSVLRMLVSVSGARRC 52
>SB_14751| Best HMM Match : DUF1602 (HMM E-Value=1.9)
Length = 334
Score = 27.1 bits (57), Expect = 8.6
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -3
Query: 117 PTEANNIAHDLPISPLPTIPT-FSDLNLEA 31
PT + + H P PLP IPT S ++L+A
Sbjct: 82 PTSPSLVYHSYPYKPLPRIPTSLSLVSLQA 111
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,162,024
Number of Sequences: 59808
Number of extensions: 303822
Number of successful extensions: 841
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 841
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1075029208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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