Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_L07
         (661 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    22   3.9  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   5.1  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   5.1  

>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 618 STFFNAPSISSAFMPS 571
           S   NAPS+S A +PS
Sbjct: 188 SALVNAPSVSPASLPS 203


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = -1

Query: 166 RISTTINLSTRQKCSLVNS*KFILYRIIDRYNV-QIQYLFSRGEYL 32
           ++  T    T  K S+V+  +F+LYR++  + + +  Y+F+   YL
Sbjct: 195 KLRFTTRKETIYKQSIVDMGEFLLYRLLRCWLISKCIYVFNPRYYL 240


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = -1

Query: 166 RISTTINLSTRQKCSLVNS*KFILYRIIDRYNV-QIQYLFSRGEYL 32
           ++  T    T  K S+V+  +F+LYR++  + + +  Y+F+   YL
Sbjct: 195 KLRFTTRKETIYKQSIVDMGEFLLYRLLRCWLISKCIYVFNPRYYL 240


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,168
Number of Sequences: 336
Number of extensions: 3590
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)