Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_L07
(661 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC139.06 |hat1|SPAC23C4.01|histone acetyltransferase Hat1|Schi... 49 7e-07
SPAC8C9.15c |tif225||translation initiation factor eIF2B epsilon... 29 0.78
SPCC1259.07 |||transcriptional regulatory protein Rxt3 |Schizosa... 29 0.78
SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like |Schizosacch... 28 1.0
SPAC5D6.09c |mug86||acetate transporter |Schizosaccharomyces pom... 26 4.2
SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory sub... 26 4.2
SPBC32F12.01c ||SPBC685.10c|inositol phosphosphingolipid phospho... 26 5.5
SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 5.5
SPAC9E9.06c |||threonine synthase |Schizosaccharomyces pombe|chr... 25 7.3
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 25 7.3
SPBC24C6.10c |||conserved eukaryotic protein|Schizosaccharomyces... 25 9.7
SPBC337.09 |erg28||Erg28 protein|Schizosaccharomyces pombe|chr 2... 25 9.7
SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosacch... 25 9.7
>SPAC139.06 |hat1|SPAC23C4.01|histone acetyltransferase
Hat1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 48.8 bits (111), Expect = 7e-07
Identities = 27/91 (29%), Positives = 46/91 (50%)
Frame = +2
Query: 347 VVHGNEILELKLVRSTEDLEDDDTSFSPEMCHQVFGENENIFGYTDLHIKLFYSAGSLQT 526
V + NE +E+ V + + D + P + +FG+ E I+GY DL++ + Y +
Sbjct: 8 VHNANECIEIVQVN---EKHEKDCQYHPSNTYAIFGDAEVIYGYKDLNVTITYECPLMVP 64
Query: 527 YLGIDYTDXIEPFTSEGMKADDIEGALKKVL 619
L I Y++ + P G++ DIEG L L
Sbjct: 65 KLEISYSERLAP--DSGVEPTDIEGTLNTYL 93
>SPAC8C9.15c |tif225||translation initiation factor eIF2B epsilon
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 678
Score = 28.7 bits (61), Expect = 0.78
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +3
Query: 156 VEIRHKLI--YLNYCNR**EIPTCESTISHFQDVKTIFDYQLLTTILRGNIIYAELAK 323
+E+R+ LI ++ C+ ++P + +QD++ F Y +LT+ L G I+ +AK
Sbjct: 212 LEVRNDLIDCQIDICSN--DVPALFTENFDYQDIRKDFVYGVLTSDLLGKKIHCHVAK 267
>SPCC1259.07 |||transcriptional regulatory protein Rxt3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 351
Score = 28.7 bits (61), Expect = 0.78
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -2
Query: 633 TYPGASTFFNAPSISSAFMPSDVNGSIXSV*SMPRYVCR 517
++PGA T +A SIS PS+++ S+ S P++ R
Sbjct: 130 SHPGAPTATSADSISMESRPSNLSTSLSKTTSYPQFQVR 168
>SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1030
Score = 28.3 bits (60), Expect = 1.0
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +2
Query: 371 ELK-LVRSTEDLEDDDTSFSPEMCHQVFGENENIF-GYTDLHIKLFYSAGSLQTYLGIDY 544
ELK L+R TE ED+ +SFS E E+I +D + Y+ SL+ +
Sbjct: 24 ELKVLLRDTETKEDEKSSFSN-------SEEESIIENLSDSSVNKEYAKNSLKLSDAVSE 76
Query: 545 TDXIEPFTSEGMKADDIEGALKKVLAP 625
+ + P + K D AL KV+ P
Sbjct: 77 SKYLNPLLKD--KRHDRSFALHKVVVP 101
>SPAC5D6.09c |mug86||acetate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 304
Score = 26.2 bits (55), Expect = 4.2
Identities = 11/32 (34%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -1
Query: 94 YRIIDRYNVQIQYLFSRGEYL-CWFIYQFLIV 2
+ I + Y+ + ++ G YL CWFI+ FL++
Sbjct: 173 FNIQNSYDDPNDFNYAIGLYLICWFIFTFLVL 204
>SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory
subunit Ekc1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 838
Score = 26.2 bits (55), Expect = 4.2
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2
Query: 380 LVRSTEDLEDDDTSFSPEMCHQVFGENENIFGYTDLH 490
LV S ED DDD++FS + F E E++ G D+H
Sbjct: 408 LVMSDED--DDDSTFSDKNSKD-FKETEDMNGAEDMH 441
>SPBC32F12.01c ||SPBC685.10c|inositol phosphosphingolipid
phospholipase C |Schizosaccharomyces pombe|chr
2|||Manual
Length = 424
Score = 25.8 bits (54), Expect = 5.5
Identities = 9/35 (25%), Positives = 22/35 (62%)
Frame = +3
Query: 207 EIPTCESTISHFQDVKTIFDYQLLTTILRGNIIYA 311
++ C+ I Q+V +I+D+Q + ++ N++Y+
Sbjct: 36 KLAKCDYDIVLLQEVWSIYDFQEIRNLVSCNLVYS 70
>SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 419
Score = 25.8 bits (54), Expect = 5.5
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Frame = +2
Query: 365 ILELKLVRSTEDLEDDDTSFSPEMCHQVFGENENIFG-YTDLHIKL---FYS-AGSLQTY 529
I+E + + + ++ D SFSP+ C++ + +NIF ++ + +K+ F+S L
Sbjct: 103 IIEEQFCKRLQQIDYDAYSFSPKECNE---KLKNIFSEFSQMKLKMLSVFFSIVQILLPK 159
Query: 530 LGIDYTDXIEPFTS 571
L DY + ++ F S
Sbjct: 160 LSGDYQEHVQFFAS 173
>SPAC9E9.06c |||threonine synthase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 514
Score = 25.4 bits (53), Expect = 7.3
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -1
Query: 661 KRHKLV*VSYISWS*YLFQCTFYIISF 581
K+H + V+ I+W+ L Q T+Y+ S+
Sbjct: 225 KKHHIGAVNSINWARILSQITYYLYSY 251
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting protein
3 homolog Bud6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1385
Score = 25.4 bits (53), Expect = 7.3
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 365 ILELKLVRSTEDLEDDDTSFSPEMCHQVFGENENIFGYTDL 487
I E +VRST DD+ + S ++V ++ +F TDL
Sbjct: 1305 IYETPIVRSTAHETDDEQTPSKYSDNRVESSSDTVFENTDL 1345
>SPBC24C6.10c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 374
Score = 25.0 bits (52), Expect = 9.7
Identities = 17/67 (25%), Positives = 32/67 (47%)
Frame = +2
Query: 239 FSRRQNNI*LPATYYHFAREYYICRTCKMTDALCHLVVHGNEILELKLVRSTEDLEDDDT 418
F R N+ + Y YYICR+ +++ +V +E + L +++E+ +D+
Sbjct: 132 FKDRSENVAFTSFRYALFLVYYICRSRRLSPT---DLVAIDEYFLVNLFKTSEEAWNDED 188
Query: 419 SFSPEMC 439
S MC
Sbjct: 189 MDSFGMC 195
>SPBC337.09 |erg28||Erg28 protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 136
Score = 25.0 bits (52), Expect = 9.7
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -1
Query: 616 YLFQCTFYIISFHAFRCKW 560
+L QCT+Y+ FH F +W
Sbjct: 81 FLCQCTYYLACFH-FLSEW 98
>SPCC63.11 |prp28||U5 snRNP-associated protein Prp28
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 25.0 bits (52), Expect = 9.7
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +2
Query: 389 STED-LEDDDTSFSPEMCHQVFGENENIFGYTDLHI-KLFYSAGSLQTYL 532
+T+D ++D +TS SPE VFG + + G+ D I K ++G +Q L
Sbjct: 136 ATDDTMKDAETSASPEATIAVFGRGK-LGGFDDQSIRKAKSNSGLIQRLL 184
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,722,781
Number of Sequences: 5004
Number of extensions: 56169
Number of successful extensions: 132
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 132
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 299817502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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