Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_L07
(661 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49128-4|CAA88954.1| 541|Caenorhabditis elegans Hypothetical pr... 53 2e-07
U50300-1|AAC48108.2| 349|Caenorhabditis elegans Serpentine rece... 33 0.18
Z74473-3|CAA98948.1| 364|Caenorhabditis elegans Hypothetical pr... 29 2.2
AY008131-1|AAG32084.1| 364|Caenorhabditis elegans heterotrimeri... 29 2.2
AC024791-7|AAU20833.1| 278|Caenorhabditis elegans Hypothetical ... 29 2.9
AC006644-6|AAZ91358.1| 958|Caenorhabditis elegans Hypothetical ... 29 2.9
Z81519-6|CAB04220.2| 1631|Caenorhabditis elegans Hypothetical pr... 28 6.8
AL034543-6|CAJ43443.1| 1631|Caenorhabditis elegans Hypothetical ... 28 6.8
AC006634-1|AAF39796.1| 231|Caenorhabditis elegans Hypothetical ... 27 8.9
>Z49128-4|CAA88954.1| 541|Caenorhabditis elegans Hypothetical
protein M03C11.4 protein.
Length = 541
Score = 53.2 bits (122), Expect = 2e-07
Identities = 22/80 (27%), Positives = 48/80 (60%)
Frame = +2
Query: 356 GNEILELKLVRSTEDLEDDDTSFSPEMCHQVFGENENIFGYTDLHIKLFYSAGSLQTYLG 535
G ++++ +++ +++ + PEM +Q FG+ E IFGY DL + + ++A +L +Y+
Sbjct: 149 GLAVVKMTFLKNMQEISTAPR-YEPEMVYQHFGDEETIFGYEDLEVTIHHTAQTLYSYIN 207
Query: 536 IDYTDXIEPFTSEGMKADDI 595
+ Y+ + G++ADD+
Sbjct: 208 VSYSSKAK--NENGLEADDV 225
>U50300-1|AAC48108.2| 349|Caenorhabditis elegans Serpentine
receptor, class x protein3 protein.
Length = 349
Score = 33.1 bits (72), Expect = 0.18
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 208 RYLHVN-QLYHIFKTSKQYLITSYLLPFCAGILYMQNLQND*C 333
RYL + Q +HIF T+ LI +L+PF G++Y N C
Sbjct: 110 RYLVICLQKHHIFTTTTTILIFLFLIPFSFGLMYNSQYVNPCC 152
>Z74473-3|CAA98948.1| 364|Caenorhabditis elegans Hypothetical
protein F56H9.3 protein.
Length = 364
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +2
Query: 383 VRSTEDLEDDDTSFSPEMCHQVFGENENIF-GYTDLHIKLFYSAGSLQTYLGIDYTDXIE 559
++ + + D+ S +M + G NI G ++H+ + S + L D+ + +
Sbjct: 56 IKQIKIIHDEGYSAEEKMVRK-HGIYMNILEGIEEIHLSVGRENKSYKNPLSFDHINEVR 114
Query: 560 PFTSEGMKADDIEGALKKVLAPGYVTNLDQFV 655
FT KADD E K+L P + + +++
Sbjct: 115 MFTENFKKADDSE----KLLGPEVINAIQKYI 142
>AY008131-1|AAG32084.1| 364|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 364
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Frame = +2
Query: 383 VRSTEDLEDDDTSFSPEMCHQVFGENENIF-GYTDLHIKLFYSAGSLQTYLGIDYTDXIE 559
++ + + D+ S +M + G NI G ++H+ + S + L D+ + +
Sbjct: 56 IKQIKIIHDEGYSAEEKMVRK-HGIYMNILEGIEEIHLSVGRENKSYKNPLSFDHINEVR 114
Query: 560 PFTSEGMKADDIEGALKKVLAPGYVTNLDQFV 655
FT KADD E K+L P + + +++
Sbjct: 115 MFTENFKKADDSE----KLLGPEVINAIQKYI 142
>AC024791-7|AAU20833.1| 278|Caenorhabditis elegans Hypothetical
protein Y47G6A.15 protein.
Length = 278
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 521 QTYLGIDYTDXIEPFTSEGMKADDIEGALKKVLA 622
QTY G Y +E F E KAD++E +++ A
Sbjct: 53 QTYTGAQYNRLVEKFKKEVDKADELEAEKRQLEA 86
>AC006644-6|AAZ91358.1| 958|Caenorhabditis elegans Hypothetical
protein F55A3.1 protein.
Length = 958
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 106 KFILYRIIDRYNVQIQYLFSRGEYLCWFIYQF 11
+FI+ + + NV Y S G Y+CW I +F
Sbjct: 783 RFIILMVSGQTNVHEMYTVSLGLYVCWTIGKF 814
>Z81519-6|CAB04220.2| 1631|Caenorhabditis elegans Hypothetical
protein F29C12.3 protein.
Length = 1631
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +2
Query: 362 EILELKLVRSTEDLEDDDTSFSPEMCHQVFGENENIFGYTDLHIKLF 502
E +++ T + ++ SF E C + FG++ IF Y++ K F
Sbjct: 388 EFVDVPYANKTFESWEEALSFYSEKCRKRFGKSSEIFFYSEKFSKNF 434
>AL034543-6|CAJ43443.1| 1631|Caenorhabditis elegans Hypothetical
protein F29C12.3 protein.
Length = 1631
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +2
Query: 362 EILELKLVRSTEDLEDDDTSFSPEMCHQVFGENENIFGYTDLHIKLF 502
E +++ T + ++ SF E C + FG++ IF Y++ K F
Sbjct: 388 EFVDVPYANKTFESWEEALSFYSEKCRKRFGKSSEIFFYSEKFSKNF 434
>AC006634-1|AAF39796.1| 231|Caenorhabditis elegans Hypothetical
protein F35F11.3 protein.
Length = 231
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +3
Query: 135 RVERFIVVEIRHKLIYLNYCNR**EIPTCESTISHFQDVKTIFDYQLLTTIL 290
++ RFIV+ + L LN NR + T E + H +FD+ +L L
Sbjct: 23 KLTRFIVISDCYSLDLLNVINRHEILRTSEGLMPHIVPRVEVFDFLILIDAL 74
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,919,456
Number of Sequences: 27780
Number of extensions: 310360
Number of successful extensions: 704
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 704
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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