Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_L07
         (661 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    22   4.5  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    22   4.5  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    22   4.5  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     22   6.0  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    21   7.9  

>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/39 (23%), Positives = 17/39 (43%)
 Frame = +2

Query: 440 HQVFGENENIFGYTDLHIKLFYSAGSLQTYLGIDYTDXI 556
           H++     N + Y + + K  Y     + Y  I+Y + I
Sbjct: 79  HKIISSLSNNYNYNNNNYKKLYCNNYKKLYYNINYIEQI 117


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/39 (23%), Positives = 17/39 (43%)
 Frame = +2

Query: 440 HQVFGENENIFGYTDLHIKLFYSAGSLQTYLGIDYTDXI 556
           H++     N + Y + + K  Y     + Y  I+Y + I
Sbjct: 79  HKIISSLSNNYNYNNNNYKKLYCNNYKKLYYNINYIEQI 117


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/39 (23%), Positives = 17/39 (43%)
 Frame = +2

Query: 440 HQVFGENENIFGYTDLHIKLFYSAGSLQTYLGIDYTDXI 556
           H++     N + Y + + K  Y     + Y  I+Y + I
Sbjct: 79  HKIISSLSNNYNYNNNNYKKLYCNNYRKLYYNINYIEQI 117


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 182 IDQLMTNFYNNKSFNTTKMLFGKF 111
           ++  +  F+N+K  N    LFG F
Sbjct: 206 LEHTLDRFHNDKYSNVPYFLFGDF 229



 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -2

Query: 450 KTWWHISGXXXXXXXXXXXVDRTNFNSKISFP 355
           +T W ISG            D +NF +  +FP
Sbjct: 164 RTRWSISGTVFDLINIHLFHDASNFIAMETFP 195


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 476 YTDLHIKLFYSAGSLQTYL 532
           Y D+H+ ++   G L T+L
Sbjct: 55  YQDVHVMIWIGFGFLMTFL 73


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,372
Number of Sequences: 438
Number of extensions: 4013
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)