Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_L02
(587 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 27 0.14
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 2.9
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 3.9
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 3.9
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 3.9
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 3.9
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 3.9
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 3.9
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 3.9
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 5.1
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 21 6.8
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 21 6.8
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 6.8
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 6.8
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 21 9.0
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 21 9.0
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 21 9.0
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 21 9.0
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 27.1 bits (57), Expect = 0.14
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 483 QKGDRGFPGLSGLKGNTGLPGAPGRPGEPGMDGTP 587
Q+G +G G++G G+ G G G G+ G P
Sbjct: 841 QQGVQGVQTAQGVQGVQGVQGVQGVQGVQGVQGVP 875
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 2.9
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +3
Query: 402 GYGLPGSPGLKGDFGMPGLDGSPGS 476
G +P P + GMP L PGS
Sbjct: 414 GAPMPPIPNMSNMSGMPPLPNMPGS 438
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 50 RPGRNQWYTRRKRRQGSYRISR 115
R RN++ R+R Q SY+ R
Sbjct: 33 RTSRNRYSRSREREQNSYKNER 54
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 50 RPGRNQWYTRRKRRQGSYRISR 115
R RN++ R+R Q SY+ R
Sbjct: 33 RTSRNRYSRSREREQNSYKNER 54
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 50 RPGRNQWYTRRKRRQGSYRISR 115
R RN++ R+R Q SY+ R
Sbjct: 33 RTSRNRYSRSREREQNSYKNER 54
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 50 RPGRNQWYTRRKRRQGSYRISR 115
R RN++ R+R Q SY+ R
Sbjct: 33 RTSRNRYSRSREREQNSYKNER 54
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 50 RPGRNQWYTRRKRRQGSYRISR 115
R RN++ R+R Q SY+ R
Sbjct: 33 RTSRNRYSRSREREQNSYKNER 54
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 50 RPGRNQWYTRRKRRQGSYRISR 115
R RN++ R+R Q SY+ R
Sbjct: 33 RTSRNRYSRSREREQNSYKNER 54
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 50 RPGRNQWYTRRKRRQGSYRISR 115
R RN++ R+R Q SY+ R
Sbjct: 33 RTSRNRYSRSREREQNSYKNER 54
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.8 bits (44), Expect = 5.1
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 396 APGYGLPGSPGLKGDFGMPGLDGSPGSP 479
+PG G+PG G+K M G+ P +P
Sbjct: 1134 SPG-GIPGPNGIKMPSFMEGMPHLPFTP 1160
Score = 21.0 bits (42), Expect = 9.0
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3
Query: 498 GFPGLSGLKGNTGLPGAPGRPGEP 569
G PG +G+K + + G P P P
Sbjct: 1137 GIPGPNGIKMPSFMEGMPHLPFTP 1160
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.4 bits (43), Expect = 6.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 15 GFPGSRGRPGAPGLAGIN 68
G GSRGR G G G N
Sbjct: 87 GKGGSRGRGGNRGRTGFN 104
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 441 FGMPGLDGSPGSPGQKGDRGF 503
+G P + PG PGQ+ + F
Sbjct: 19 YGTPKEEPGPGLPGQEVKQSF 39
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 451 GIPKSPFNPGLPGK 410
G PK PGLPG+
Sbjct: 20 GTPKEEPGPGLPGQ 33
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 441 FGMPGLDGSPGSPGQKGDRGF 503
+G P + PG PGQ+ + F
Sbjct: 19 YGTPKEEPGPGLPGQEVKQSF 39
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 451 GIPKSPFNPGLPGK 410
G PK PGLPG+
Sbjct: 20 GTPKEEPGPGLPGQ 33
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 441 FGMPGLDGSPGSPGQKGDRGF 503
+G P + PG PGQ+ + F
Sbjct: 19 YGTPKEEPGPGLPGQEVKQSF 39
Score = 21.4 bits (43), Expect = 6.8
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 451 GIPKSPFNPGLPGK 410
G PK PGLPG+
Sbjct: 20 GTPKEEPGPGLPGQ 33
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +3
Query: 414 PGSPGLKGDFG 446
PG PG+ GD G
Sbjct: 332 PGPPGVPGDHG 342
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +3
Query: 414 PGSPGLKGDFG 446
PG PG+ GD G
Sbjct: 332 PGPPGVPGDHG 342
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.0 bits (42), Expect = 9.0
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 181 IKALLGHLDHQEEKVYLVKKETEVSMALLVKKEN 282
+K LL D E + L KKE + L+K +N
Sbjct: 234 MKTLLSETDIWEVEQILAKKEIKGVPTYLIKWKN 267
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +3
Query: 414 PGSPGLKGDFG 446
PG PG+ GD G
Sbjct: 271 PGPPGVPGDHG 281
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,519
Number of Sequences: 438
Number of extensions: 3973
Number of successful extensions: 28
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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