Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_L01
(490 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1253 + 28761311-28761598,28761689-28761882,28762327-28762711 33 0.12
04_04_1069 - 30554565-30555021,30556833-30557026,30557182-30557496 32 0.22
06_03_1252 + 28753584-28753883,28754693-28754886,28755192-28755597 32 0.28
08_01_0869 + 8487518-8487697,8487792-8488127,8488211-8488410,848... 31 0.38
07_03_0376 + 17437308-17437536,17438049-17438149,17438246-174384... 31 0.38
04_04_1068 + 30552935-30553234,30553424-30553623,30553738-30554122 31 0.66
04_04_1063 - 30507734-30508127,30508248-30508447,30508559-30508846 30 1.1
03_01_0121 + 940338-940637,941023-941324,941417-941969,943889-94... 30 1.1
07_03_0684 + 20675947-20676157,20676236-20676336,20676428-206766... 29 2.0
06_02_0222 + 13229330-13229501,13230175-13230275,13230381-132305... 29 2.0
04_04_1586 - 34621945-34623366 29 2.0
04_04_0689 - 27292271-27292709,27293717-27293856,27294572-272946... 29 2.0
12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,769... 29 2.6
03_01_0056 - 471338-471919,472013-472213 29 2.6
02_02_0446 + 10358658-10358948,10359093-10359286,10359762-10360167 29 2.6
05_06_0288 + 26954222-26954446,26954995-26955124,26955221-269554... 28 4.6
02_02_0447 + 10363077-10363245,10363419-10363519,10363947-103641... 28 4.6
06_03_1254 - 28773066-28773489,28773580-28773773,28773849-28774103 27 6.1
06_03_0163 - 17380601-17380710,17380796-17380856,17381076-173811... 27 6.1
02_04_0416 + 22712004-22712195,22712296-22712377,22712464-22712663 27 6.1
02_01_0520 + 3761051-3761107,3761420-3761822,3761960-3762129 27 8.1
>06_03_1253 + 28761311-28761598,28761689-28761882,28762327-28762711
Length = 288
Score = 33.1 bits (72), Expect = 0.12
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 138 KDYHNYTLIWKPDSIETYVDG 200
KD+H Y+++W P I YVDG
Sbjct: 146 KDFHTYSVLWNPSHILFYVDG 166
>04_04_1069 - 30554565-30555021,30556833-30557026,30557182-30557496
Length = 321
Score = 32.3 bits (70), Expect = 0.22
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +3
Query: 141 DYHNYTLIWKPDSIETYVDGELYGTINPGEGF---YALGRQNAVPHAAQW 281
D+HNYT++W P +I VDG+ E Y G+ V HA+ W
Sbjct: 156 DFHNYTILWNPLNIIFSVDGKAVRVFKNHEAAGVPYPSGQAMRV-HASLW 204
>06_03_1252 + 28753584-28753883,28754693-28754886,28755192-28755597
Length = 299
Score = 31.9 bits (69), Expect = 0.28
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +3
Query: 141 DYHNYTLIWKPDSIETYVDG 200
D+H Y+++W P +I Y+DG
Sbjct: 151 DFHTYSILWNPHNIILYIDG 170
>08_01_0869 +
8487518-8487697,8487792-8488127,8488211-8488410,
8488586-8488973
Length = 367
Score = 31.5 bits (68), Expect = 0.38
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 138 KDYHNYTLIWKPDSIETYVDG 200
+D+H YT+IW P I VDG
Sbjct: 224 EDFHTYTIIWNPQMILILVDG 244
>07_03_0376 +
17437308-17437536,17438049-17438149,17438246-17438463,
17438544-17438901
Length = 301
Score = 31.5 bits (68), Expect = 0.38
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +3
Query: 141 DYHNYTLIWKPDSIETYVD 197
D+H+Y ++W PD+I +VD
Sbjct: 169 DFHHYAILWNPDAITFFVD 187
>04_04_1068 + 30552935-30553234,30553424-30553623,30553738-30554122
Length = 294
Score = 30.7 bits (66), Expect = 0.66
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 141 DYHNYTLIWKPDSIETYVDGE 203
DYH Y+++W P I VDG+
Sbjct: 153 DYHTYSIVWNPKRILILVDGK 173
>04_04_1063 - 30507734-30508127,30508248-30508447,30508559-30508846
Length = 293
Score = 29.9 bits (64), Expect = 1.1
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 138 KDYHNYTLIWKPDSIETYVD 197
+D+H Y++IW PD I VD
Sbjct: 148 QDFHTYSVIWNPDEILILVD 167
>03_01_0121 +
940338-940637,941023-941324,941417-941969,943889-944848
Length = 704
Score = 29.9 bits (64), Expect = 1.1
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 144 YHNYTLIWKPDSIETYVDGEL 206
+H+Y + W D+IE +DGEL
Sbjct: 535 FHHYAIAWGADAIEWRIDGEL 555
>07_03_0684 +
20675947-20676157,20676236-20676336,20676428-20676630,
20677024-20677438
Length = 309
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +3
Query: 60 GGPVLSDTEPFRTLLLKEKIGIDNW---NKDYHNYTLIWKPDSIETYVD 197
G P + T +R+ + ++ W D+H+Y+++W P I +VD
Sbjct: 128 GEPYIIQTNVYRSGVGGREMRHSLWFDPTADFHSYSILWNPKQIVFFVD 176
>06_02_0222 +
13229330-13229501,13230175-13230275,13230381-13230574,
13232600-13233068
Length = 311
Score = 29.1 bits (62), Expect = 2.0
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3
Query: 144 YHNYTLIWKPDSIETYVD 197
YHNYT+ W P I +VD
Sbjct: 143 YHNYTIFWNPCMIVWFVD 160
>04_04_1586 - 34621945-34623366
Length = 473
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +3
Query: 225 GEGFYALGRQNAVPHAAQWLSGTVMAPLDQIFYISL-GLRVGG 350
G G LGR AVP A W+ +Y+ L G+ VGG
Sbjct: 289 GAGSLVLGRTEAVPVGAVWVPLVRNNQASSFYYVGLTGIGVGG 331
>04_04_0689 -
27292271-27292709,27293717-27293856,27294572-27294664,
27295614-27296012,27296258-27296392,27296482-27296835
Length = 519
Score = 29.1 bits (62), Expect = 2.0
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 141 DYHNYTLIWKPDSIETYVDGELYGTINPGEGFYA 242
D + T++W P + YVD + G + G G+Y+
Sbjct: 449 DMQDVTMLWLPGGVTAYVDVDKDGILCIGVGWYS 482
>12_01_0831 -
7688342-7688772,7690678-7692610,7693142-7693915,
7694019-7694142,7696084-7696189,7696346-7696532
Length = 1184
Score = 28.7 bits (61), Expect = 2.6
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = -1
Query: 370 PSAKSFTPPTRKPSDI*KI*SRGAMTVPESHCAA*GTAFCLPRA*KPSP 224
PSAK+ TPP R PS + P S + G+ L R PSP
Sbjct: 194 PSAKTLTPPRRSPSPASTLTPPRRSPSPASRRMSTGSTPALNRTRGPSP 242
>03_01_0056 - 471338-471919,472013-472213
Length = 260
Score = 28.7 bits (61), Expect = 2.6
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 141 DYHNYTLIWKPDSIETYVD 197
D+H+Y ++W PD I VD
Sbjct: 126 DFHHYAILWNPDHIVFLVD 144
>02_02_0446 + 10358658-10358948,10359093-10359286,10359762-10360167
Length = 296
Score = 28.7 bits (61), Expect = 2.6
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3
Query: 147 HNYTLIWKPDSIETYVDG 200
HNYT+ W P I Y+DG
Sbjct: 150 HNYTISWTPCRIVWYIDG 167
>05_06_0288 +
26954222-26954446,26954995-26955124,26955221-26955414,
26955638-26956273
Length = 394
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -3
Query: 107 EQQSSERLGVGENGSTVKFLS 45
+ Q S+R G G NGST K LS
Sbjct: 180 DYQESKRKGTGRNGSTFKILS 200
>02_02_0447 +
10363077-10363245,10363419-10363519,10363947-10364140,
10364223-10364634
Length = 291
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 144 YHNYTLIWKPDSIETYVDG 200
YHNYT+ W I Y+DG
Sbjct: 142 YHNYTVSWTACMIVWYIDG 160
>06_03_1254 - 28773066-28773489,28773580-28773773,28773849-28774103
Length = 290
Score = 27.5 bits (58), Expect = 6.1
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 138 KDYHNYTLIWKPDSIETYVD 197
KD+H Y+++W P I VD
Sbjct: 135 KDFHTYSILWNPKHIIFMVD 154
>06_03_0163 -
17380601-17380710,17380796-17380856,17381076-17381150,
17381538-17381600,17381679-17381755,17382432-17382515,
17382610-17382654,17382729-17382789,17383658-17384053,
17384220-17384289,17387010-17387083,17387202-17387246,
17387342-17387391,17387846-17387947,17388587-17388620,
17388681-17388758,17388915-17388965,17389082-17389085,
17389182-17389256,17389530-17389624
Length = 549
Score = 27.5 bits (58), Expect = 6.1
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 240 ALGRQNAVPHAAQWLSGTVMAPLDQIFYISLGLR 341
+LGR VP +WLS T + P ++ +GL+
Sbjct: 95 SLGRHYKVPMEIRWLSSTAIGPARLLWQQLIGLQ 128
>02_04_0416 + 22712004-22712195,22712296-22712377,22712464-22712663
Length = 157
Score = 27.5 bits (58), Expect = 6.1
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -3
Query: 350 AADA*TQRYIEDLIERRHDC 291
AADA T R+ DL+ RHDC
Sbjct: 127 AADAFTARWPTDLVVGRHDC 146
>02_01_0520 + 3761051-3761107,3761420-3761822,3761960-3762129
Length = 209
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 279 TARREAQRSACRERRNPPRG*LSR 208
TAR E +R+ R+ R PP+G SR
Sbjct: 48 TAREEEKRNTGRQERAPPKGTSSR 71
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,447,128
Number of Sequences: 37544
Number of extensions: 278527
Number of successful extensions: 844
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1011709100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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