Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_L01
(490 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46787-17|CAO78704.1| 863|Caenorhabditis elegans Hypothetical p... 30 0.78
Z35596-3|CAO78714.1| 863|Caenorhabditis elegans Hypothetical pr... 30 0.78
U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated p... 27 5.5
U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated p... 27 5.5
AY313178-1|AAP79303.1| 569|Caenorhabditis elegans myotubularin-... 27 5.5
AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin... 27 5.5
AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectr... 27 5.5
AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectr... 27 5.5
AC024770-4|AAT68891.1| 521|Caenorhabditis elegans Mtm (myotubul... 27 5.5
AC024770-3|AAK84604.1| 569|Caenorhabditis elegans Mtm (myotubul... 27 5.5
L07144-7|AAK21444.2| 646|Caenorhabditis elegans Hypothetical pr... 27 7.3
U53141-8|AAA96110.3| 572|Caenorhabditis elegans Prion-like-(q/n... 27 9.7
>Z46787-17|CAO78704.1| 863|Caenorhabditis elegans Hypothetical
protein C30D11.1c protein.
Length = 863
Score = 30.3 bits (65), Expect = 0.78
Identities = 19/63 (30%), Positives = 25/63 (39%)
Frame = +1
Query: 163 FGNQTALRLTLMVNYTGQSTPGRVSTLSAGRTLCLTPRSGSPEQSWRLSIKSSIYRWVYA 342
FGN R TL +N P S ++ L RSGS L IK ++ + A
Sbjct: 43 FGNGNLSRSTLSINQEISMAPSPFSEITVSSQRPLVARSGSNSSEHNLQIKEAVKKKPVA 102
Query: 343 SAA 351
A
Sbjct: 103 DIA 105
>Z35596-3|CAO78714.1| 863|Caenorhabditis elegans Hypothetical
protein C30D11.1c protein.
Length = 863
Score = 30.3 bits (65), Expect = 0.78
Identities = 19/63 (30%), Positives = 25/63 (39%)
Frame = +1
Query: 163 FGNQTALRLTLMVNYTGQSTPGRVSTLSAGRTLCLTPRSGSPEQSWRLSIKSSIYRWVYA 342
FGN R TL +N P S ++ L RSGS L IK ++ + A
Sbjct: 43 FGNGNLSRSTLSINQEISMAPSPFSEITVSSQRPLVARSGSNSSEHNLQIKEAVKKKPVA 102
Query: 343 SAA 351
A
Sbjct: 103 DIA 105
>U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated
protein 70, isoform a protein.
Length = 2257
Score = 27.5 bits (58), Expect = 5.5
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 2 WPHQDRLRKRQRCLRKETLRWTRSLRHRAFQNSVAQRKNRH*QLE 136
W + +R + R ++ +RH+AFQ+ +A K R QL+
Sbjct: 1280 WIEEKMIRAQDETYRDAKTITSKFVRHQAFQSELAANKERLDQLK 1324
>U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated
protein 70, isoform b protein.
Length = 2302
Score = 27.5 bits (58), Expect = 5.5
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 2 WPHQDRLRKRQRCLRKETLRWTRSLRHRAFQNSVAQRKNRH*QLE 136
W + +R + R ++ +RH+AFQ+ +A K R QL+
Sbjct: 1280 WIEEKMIRAQDETYRDAKTITSKFVRHQAFQSELAANKERLDQLK 1324
>AY313178-1|AAP79303.1| 569|Caenorhabditis elegans
myotubularin-related protein MTM-9 protein.
Length = 569
Score = 27.5 bits (58), Expect = 5.5
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -3
Query: 371 AVGEIIHAADA*TQRYIEDLIERRHDCSGEPLRGVRHSVLPAESVETLP 225
++ +I+ ADA T R E +IER C G P + AE T P
Sbjct: 358 SLAQILLDADARTIRGFESVIEREWICGGHPFSLRNNHCAYAEGTVTGP 406
>AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin
protein.
Length = 2257
Score = 27.5 bits (58), Expect = 5.5
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 2 WPHQDRLRKRQRCLRKETLRWTRSLRHRAFQNSVAQRKNRH*QLE 136
W + +R + R ++ +RH+AFQ+ +A K R QL+
Sbjct: 1280 WIEEKMIRAQDETYRDAKTITSKFVRHQAFQSELAANKERLDQLK 1324
>AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2257
Score = 27.5 bits (58), Expect = 5.5
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 2 WPHQDRLRKRQRCLRKETLRWTRSLRHRAFQNSVAQRKNRH*QLE 136
W + +R + R ++ +RH+AFQ+ +A K R QL+
Sbjct: 1280 WIEEKMIRAQDETYRDAKTITSKFVRHQAFQSELAANKERLDQLK 1324
>AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2302
Score = 27.5 bits (58), Expect = 5.5
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 2 WPHQDRLRKRQRCLRKETLRWTRSLRHRAFQNSVAQRKNRH*QLE 136
W + +R + R ++ +RH+AFQ+ +A K R QL+
Sbjct: 1280 WIEEKMIRAQDETYRDAKTITSKFVRHQAFQSELAANKERLDQLK 1324
>AC024770-4|AAT68891.1| 521|Caenorhabditis elegans Mtm
(myotubularin) family protein9, isoform b protein.
Length = 521
Score = 27.5 bits (58), Expect = 5.5
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -3
Query: 371 AVGEIIHAADA*TQRYIEDLIERRHDCSGEPLRGVRHSVLPAESVETLP 225
++ +I+ ADA T R E +IER C G P + AE T P
Sbjct: 310 SLAQILLDADARTIRGFESVIEREWICGGHPFSLRNNHCAYAEGTVTGP 358
>AC024770-3|AAK84604.1| 569|Caenorhabditis elegans Mtm
(myotubularin) family protein9, isoform a protein.
Length = 569
Score = 27.5 bits (58), Expect = 5.5
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = -3
Query: 371 AVGEIIHAADA*TQRYIEDLIERRHDCSGEPLRGVRHSVLPAESVETLP 225
++ +I+ ADA T R E +IER C G P + AE T P
Sbjct: 358 SLAQILLDADARTIRGFESVIEREWICGGHPFSLRNNHCAYAEGTVTGP 406
>L07144-7|AAK21444.2| 646|Caenorhabditis elegans Hypothetical
protein R05D3.9 protein.
Length = 646
Score = 27.1 bits (57), Expect = 7.3
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 104 QQSSERLGVGENGSTVKFLSEDSV 33
+++ + LGVGEN S + FL++D V
Sbjct: 521 KKTKKALGVGENESIIVFLNKDRV 544
>U53141-8|AAA96110.3| 572|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 13
protein.
Length = 572
Score = 26.6 bits (56), Expect = 9.7
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = -2
Query: 282 ATARREAQRSACRERRNPPRG*LSRIVHHQRKSQCCLVSKLTCNYDNPYSSCQC 121
A+A +E + +E+ P + V + K QCC ++ +C S C C
Sbjct: 47 ASAIKETVKEEVKEKEGPETRNETAAVS-RAKRQCCFAAQNSCCPQQVQSQCNC 99
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,092,561
Number of Sequences: 27780
Number of extensions: 232296
Number of successful extensions: 651
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 651
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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