Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_K21
         (467 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    27   0.065
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   3.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   3.3  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    22   3.3  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   4.3  
AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    21   7.5  

>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 27.5 bits (58), Expect = 0.065
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -1

Query: 167 GVSGILRRRTRSVLDRPDRHCLPVRPSKWPPS 72
           G+S   R+RT   L  P  +  P+ PS  PPS
Sbjct: 94  GISASKRQRTDDWLSSPSGNVPPLTPSPGPPS 125


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = -1

Query: 224 SRATPGSLRRYALR*EQRSGVSGILRRRTRSVLDRPDRHCLPVRP 90
           + AT G  R+   + +   G + + + R R  LD+ ++ C P RP
Sbjct: 550 ANATRGKKRKR--KQDPADGGNSMKKCRARYGLDQQNQWCKPCRP 592


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = -1

Query: 224 SRATPGSLRRYALR*EQRSGVSGILRRRTRSVLDRPDRHCLPVRP 90
           + AT G  R+   + +   G + + + R R  LD+ ++ C P RP
Sbjct: 442 ANATRGKKRKR--KQDPADGGNSMKKCRARYGLDQQNQWCKPCRP 484


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -2

Query: 124 TVRIVIVYRFDLQNGHHPREFSEFGLAVPLSCCF 23
           T  + + + F  +NGH+  +F+   +   LSC F
Sbjct: 54  TCELKLWWEFCQRNGHNCLDFTVQNILTFLSCRF 87


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = -2

Query: 196 VMRCGENSARVYQGSSADVHVQ 131
           +  C EN    +QG   DV ++
Sbjct: 107 ISECAENFVDFFQGREQDVEIK 128


>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 343 YTIPEESNGI 372
           YT+P+ESN I
Sbjct: 79  YTLPKESNAI 88


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,744
Number of Sequences: 336
Number of extensions: 2614
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10826639
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)