Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_K21
         (467 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    25   0.31 
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    21   6.6  
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              21   8.7  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   8.7  

>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 25.4 bits (53), Expect = 0.31
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -2

Query: 118 RIVIVYRFDLQNGHH-PREFSEFGLAVPLS 32
           R+V+ +RF+ Q GHH  + F+   L V LS
Sbjct: 188 RLVVFFRFERQIGHHLIQTFAPSTLVVMLS 217


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = +1

Query: 82  HFEGRTGKQ*RSGRSKTERVRRRRIPDTPERCSHR 186
           H  GR+GK+ +   +    V+   I  +P+   H+
Sbjct: 366 HGRGRSGKKSKFNAAVAAAVQSSSIVSSPDSARHQ 400


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 23 KTTGERDGETKFGEFP 70
          KTT E    T++GEFP
Sbjct: 48 KTTIEDVEATEYGEFP 63


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 447 VAKQRAPFLAFSSYGGRQASP 385
           +AK+   FL    +GG Q SP
Sbjct: 44  IAKECEQFLGPVGFGGVQVSP 64


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,064
Number of Sequences: 438
Number of extensions: 2995
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12559158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)