Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_K19
         (478 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    21   5.1  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    21   5.1  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   9.0  

>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 10/39 (25%), Positives = 21/39 (53%)
 Frame = -2

Query: 411 SHLLFSYIMLITSMYFQALEHSQICYIEKLYNEYKNCFV 295
           S L ++Y   + S  +  +   +I   ++L N+Y +CF+
Sbjct: 12  SLLTWTYAEELYSDKYDYVNIDEILANDRLRNQYYDCFI 50


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 10/39 (25%), Positives = 21/39 (53%)
 Frame = -2

Query: 411 SHLLFSYIMLITSMYFQALEHSQICYIEKLYNEYKNCFV 295
           S L ++Y   + S  +  +   +I   ++L N+Y +CF+
Sbjct: 12  SLLTWTYAEELYSDKYDYVNIDEILANDRLRNQYYDCFI 50


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 20.6 bits (41), Expect = 9.0
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 414 SVKLKHNFLSDIYG 455
           +++L  NFLSDI G
Sbjct: 530 AIRLDGNFLSDING 543


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,408
Number of Sequences: 438
Number of extensions: 2687
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12928545
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)