Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0005_K18
         (484 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    24   0.98 
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    24   0.98 
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    21   6.9  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   9.1  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   9.1  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.8 bits (49), Expect = 0.98
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 65  PGTYYHIPDRRRSNCRCN 118
           PGT +  PDR++   +CN
Sbjct: 651 PGTRFFYPDRKQVILKCN 668


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.8 bits (49), Expect = 0.98
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 65  PGTYYHIPDRRRSNCRCN 118
           PGT +  PDR++   +CN
Sbjct: 741 PGTRFFYPDRKQVILKCN 758


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +3

Query: 72  PIIIFLTDGDPTVGVTSTKTIIKHLTEK 155
           P I+   + D   GVT+    I H T K
Sbjct: 105 PDIVLYNNADGEYGVTTMTKAILHYTGK 132


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 150 EKNKGENKATM 182
           EKN G NK TM
Sbjct: 145 EKNAGNNKITM 155


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -2

Query: 306 KSHSVEAPRQLPRRYVARNHR*EGTTFVKTYCLHRLLNR 190
           K + ++ PRQ     V R  R   TT++  + L  L +R
Sbjct: 433 KKNKLKKPRQGDGAAVKRKSREGSTTYLWEFLLKLLQDR 471


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,110
Number of Sequences: 438
Number of extensions: 2835
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13174803
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)