Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_K17
(449 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC18.18c |fum1|SPCC290.01c|fumarate hydratase|Schizosaccharomy... 217 5e-58
SPBC1773.14 |arg7||argininosuccinate lyase |Schizosaccharomyces ... 33 0.020
SPBC1539.03c |||argininosuccinate lyase|Schizosaccharomyces pomb... 32 0.047
SPBC14F5.09c |ade8||adenylosuccinate lyase Ade8|Schizosaccharomy... 31 0.11
SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, An... 28 0.58
SPAPB1A11.03 |||FMN dependent dehydrogenase|Schizosaccharomyces ... 27 1.3
SPBC25B2.10 |||Usp |Schizosaccharomyces pombe|chr 2|||Manual 27 1.8
SPAC9E9.08 |rad26||ATRIP|Schizosaccharomyces pombe|chr 1|||Manual 25 4.1
SPBC354.08c |||DUF221 family protein|Schizosaccharomyces pombe|c... 25 4.1
SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFII... 25 5.4
SPAC105.02c |||ankyrin repeat protein, unknown biological role|S... 25 7.1
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 24 9.4
SPAC25B8.16 |||RNase P and RNase MRP subunit |Schizosaccharomyce... 24 9.4
SPBC1289.16c ||SPBC8E4.06|copper amine oxidase |Schizosaccharomy... 24 9.4
SPAC1565.07c |||TATA binding protein interacting protein |Schizo... 24 9.4
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 24 9.4
SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyce... 24 9.4
>SPCC18.18c |fum1|SPCC290.01c|fumarate hydratase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 482
Score = 217 bits (531), Expect = 5e-58
Identities = 100/148 (67%), Positives = 119/148 (80%)
Frame = +2
Query: 5 FESAPNKFEALACHDAMVEVSGALNTIAVSLMKIGNDIRLLASGPRCGLAELMLPENEPG 184
F++APNKFEALA HDA+VE+SGALN IA SLMKI NDIR L SGPRCGL EL+LP NEPG
Sbjct: 275 FKTAPNKFEALAAHDAIVEMSGALNVIACSLMKIANDIRQLGSGPRCGLGELILPANEPG 334
Query: 185 SSIMPGKVNPTQCEALTMIAVQVMGNHVGCTIGGSNGHFELNVFKPMMVANVLRSIRLIG 364
SSIMPGKVNPTQCEALTM+ QVMGNH T+ G++GH ELNVFKP++ N+L SIRL+G
Sbjct: 335 SSIMPGKVNPTQCEALTMVCAQVMGNHATITVAGASGHCELNVFKPLLAKNILSSIRLLG 394
Query: 365 DRSSAFNKNCAVGIKANEAQIAKIMRES 448
D +F +C VGI+ N IA+ +R+S
Sbjct: 395 DACESFTDHCVVGIEPNYEGIARHLRDS 422
>SPBC1773.14 |arg7||argininosuccinate lyase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 461
Score = 33.1 bits (72), Expect = 0.020
Identities = 23/87 (26%), Positives = 38/87 (43%)
Frame = +2
Query: 20 NKFEALACHDAMVEVSGALNTIAVSLMKIGNDIRLLASGPRCGLAELMLPENEPGSSIMP 199
N A+ D ++E + + + + D+ ++ S G L GSSIMP
Sbjct: 229 NSMNAVGDRDFVIEFMFWAGMVMLHISRFAEDL-IIYSSSEFGFVTLS-DAYSTGSSIMP 286
Query: 200 GKVNPTQCEALTMIAVQVMGNHVGCTI 280
K NP E L + +V+G+ +G I
Sbjct: 287 QKKNPDSLELLRGKSGRVLGDMIGLMI 313
>SPBC1539.03c |||argininosuccinate lyase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 460
Score = 31.9 bits (69), Expect = 0.047
Identities = 23/84 (27%), Positives = 37/84 (44%)
Frame = +2
Query: 20 NKFEALACHDAMVEVSGALNTIAVSLMKIGNDIRLLASGPRCGLAELMLPENEPGSSIMP 199
N A+A D ++E + + + ++ D+ ++ S L GSSIMP
Sbjct: 228 NSMNAVADRDYVIEFMFWASMVMTHISRLAEDL-IIYSTSEFNFVTLS-DAYSTGSSIMP 285
Query: 200 GKVNPTQCEALTMIAVQVMGNHVG 271
K NP E L + +V GN +G
Sbjct: 286 QKKNPDSLELLRGKSGRVFGNMMG 309
>SPBC14F5.09c |ade8||adenylosuccinate lyase Ade8|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 482
Score = 30.7 bits (66), Expect = 0.11
Identities = 22/67 (32%), Positives = 31/67 (46%)
Frame = +2
Query: 56 VEVSGALNTIAVSLMKIGNDIRLLASGPRCGLAELMLPENEPGSSIMPGKVNPTQCEALT 235
++V L + + KI DIRLLA+ E + GSS M K NP +CE +
Sbjct: 246 IDVLQPLASFGATAHKIATDIRLLANLKE---VEEPFEAGQIGSSAMAYKRNPMRCERIC 302
Query: 236 MIAVQVM 256
A +M
Sbjct: 303 SQARYIM 309
>SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, Anp
family |Schizosaccharomyces pombe|chr 2|||Manual
Length = 430
Score = 28.3 bits (60), Expect = 0.58
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = -2
Query: 445 FPHDLRDLGFIRLDTDG---AVLVER*RSVANEPDGAQH 338
+PH+L DL F+ DTD VL + ++ N+ D ++H
Sbjct: 125 YPHELIDLAFLISDTDDNTLEVLKQHLDAIQNDEDESKH 163
>SPAPB1A11.03 |||FMN dependent dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 407
Score = 27.1 bits (57), Expect = 1.3
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -2
Query: 448 GFPHDLRDLGFIRLDTDGAVLVER*RSVANEPDGAQHV 335
G HD DL F+R DG +++ + + N PD + V
Sbjct: 255 GISHDWEDLKFLRKHWDGPIVL---KGIMNVPDAKKAV 289
>SPBC25B2.10 |||Usp |Schizosaccharomyces pombe|chr 2|||Manual
Length = 307
Score = 26.6 bits (56), Expect = 1.8
Identities = 25/102 (24%), Positives = 39/102 (38%), Gaps = 6/102 (5%)
Frame = -3
Query: 363 PMSLMERSTLATIIGLKTFSSKCPLLP------PIVQPTWLPITWTAIMVRASHCVGFTL 202
P + ++ L+ +K S P+ P + QPT+ P+ ++ V + GF
Sbjct: 23 PRTSKDQQKLSISTDVKKPSHSAPVTPVRSARSSMEQPTFRPVAKNSVTVAPARAAGFCP 82
Query: 201 PGMIEDPGSFSGSISSARPQRGPEASSRMSLPIFMRDTAMVF 76
P E S S+ S P P R+S F A F
Sbjct: 83 PQFEEYHHGRSHSLVS--PPPSPHFLKRISFDTFNNKAATDF 122
>SPAC9E9.08 |rad26||ATRIP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 25.4 bits (53), Expect = 4.1
Identities = 14/27 (51%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = -3
Query: 387 LLNADDRSPMSLMER-STLATIIGLKT 310
LLNADD+S SLM+ +T+A I+ + T
Sbjct: 437 LLNADDKSQESLMQLFTTMAHILVVTT 463
>SPBC354.08c |||DUF221 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 865
Score = 25.4 bits (53), Expect = 4.1
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = -3
Query: 432 FAIWASFALIPTAQFLLNADDRSPMSLMERSTLATIIGLKTFSSKCPLLPPIVQ 271
F IW FAL P + +++ + +E + + S+ PLL P+V+
Sbjct: 678 FKIWCMFALDPKSHYMIEDPYMKVVEPLENEISESEMCFGHPSTYAPLLVPMVR 731
>SPAC2G11.14 |taf111|taf1, taf1, taf130|transcription factor TFIID
complex subunit Taf111|Schizosaccharomyces pombe|chr
1|||Manual
Length = 979
Score = 25.0 bits (52), Expect = 5.4
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3
Query: 201 PGMIEDPGSFSGSISSARPQRGP 133
PGM E P S ++ PQ GP
Sbjct: 47 PGMNESPKILDSSFENSNPQDGP 69
>SPAC105.02c |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 170
Score = 24.6 bits (51), Expect = 7.1
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 10/74 (13%)
Frame = -2
Query: 418 FIRLDTDGAV-LVER*RSVANEP-----DGAQHV----GDHHRFEDVQLEVPVAPPYSAA 269
FI+ D + A+ +VE V +P DG + + GD H LE P +A
Sbjct: 92 FIKKDQETALRMVEMLMEVGADPLLTNNDGFRPIDLVPGDFHDVFASALEGPAPALQYSA 151
Query: 268 DVVAHHLDRDHGQG 227
DVVA D + G G
Sbjct: 152 DVVADDDDEEEGSG 165
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 24.2 bits (50), Expect = 9.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 250 SDGQPRRLHYRGEQRALRAERLQTDD 327
SDG+ R +YR + R R ER DD
Sbjct: 352 SDGRYDRSNYRDDYRHRRKERDHRDD 377
>SPAC25B8.16 |||RNase P and RNase MRP subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 698
Score = 24.2 bits (50), Expect = 9.4
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 287 SNGHFELNVFKPMMVANVL 343
+ G+F LN KP +ANVL
Sbjct: 647 TTGNFNLNAGKPSGIANVL 665
>SPBC1289.16c ||SPBC8E4.06|copper amine oxidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 794
Score = 24.2 bits (50), Expect = 9.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -2
Query: 151 ETAARPGGQQPDVVADLHEGHGDGVQGSGHLHH 53
ET A+P GQQ ++ +G +G G H HH
Sbjct: 715 ETLAQP-GQQNANQSEEKQGGQNGSNGGHHHHH 746
>SPAC1565.07c |||TATA binding protein interacting protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1220
Score = 24.2 bits (50), Expect = 9.4
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = +1
Query: 334 QRAALHQAHWRPIVSVQQELRRRYQG 411
++A LH W + + + +RRY+G
Sbjct: 402 KQAFLHVPRWIEVYATSNDRKRRYEG 427
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 24.2 bits (50), Expect = 9.4
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 362 GDRSSAFNKNCAVGIKANEAQIAKI 436
GD+ + NKN V K N ++AK+
Sbjct: 1003 GDKVTVCNKNAEVSAKHNYYRLAKV 1027
>SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 297
Score = 24.2 bits (50), Expect = 9.4
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = -3
Query: 186 DPGSFSGSISSARPQRGPEASSRMSLPIFMRDTA 85
DP + S ++ PQ PE S + +F+ A
Sbjct: 76 DPNNESTALDKKEPQSAPEGSENLGNDLFVSGIA 109
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,585,561
Number of Sequences: 5004
Number of extensions: 28798
Number of successful extensions: 100
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 99
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 166231220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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