Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0005_K17
(449 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025459-6|AAN63405.1| 328|Caenorhabditis elegans Fumarase prot... 237 4e-63
AF025459-5|AAB70982.1| 501|Caenorhabditis elegans Fumarase prot... 237 4e-63
U18385-1|AAA62505.1| 276|Caenorhabditis elegans collagen protein. 31 0.51
AL032626-2|CAA21539.1| 571|Caenorhabditis elegans Hypothetical ... 29 1.2
AL032652-1|CAA21709.1| 317|Caenorhabditis elegans Hypothetical ... 29 2.1
Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical pr... 28 2.7
Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr... 28 2.7
Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical pr... 28 2.7
Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical pr... 28 2.7
Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr... 28 2.7
Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical pr... 28 2.7
AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical... 27 4.8
Z81016-5|CAB02665.3| 640|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z71266-5|CAD56593.1| 370|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z71266-4|CAA95843.1| 478|Caenorhabditis elegans Hypothetical pr... 27 6.3
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 27 6.3
AF067949-8|AAX88812.1| 565|Caenorhabditis elegans Peroxisomal m... 27 8.3
AF067949-7|AAO25995.2| 626|Caenorhabditis elegans Peroxisomal m... 27 8.3
AF067949-6|AAC19238.1| 598|Caenorhabditis elegans Peroxisomal m... 27 8.3
AF016443-3|AAC24281.1| 395|Caenorhabditis elegans Hypothetical ... 27 8.3
>AF025459-6|AAN63405.1| 328|Caenorhabditis elegans Fumarase protein
1, isoform b protein.
Length = 328
Score = 237 bits (579), Expect = 4e-63
Identities = 110/149 (73%), Positives = 125/149 (83%)
Frame = +2
Query: 2 PFESAPNKFEALACHDAMVEVSGALNTIAVSLMKIGNDIRLLASGPRCGLAELMLPENEP 181
PF +APNKFEALA HDA+VEV GALNT+AVS MKIGNDIR L SGPRCGL EL LPENEP
Sbjct: 122 PFVTAPNKFEALAAHDALVEVHGALNTVAVSFMKIGNDIRFLGSGPRCGLGELSLPENEP 181
Query: 182 GSSIMPGKVNPTQCEALTMIAVQVMGNHVGCTIGGSNGHFELNVFKPMMVANVLRSIRLI 361
GSSIMPGKVNPTQCEA+TM+A QVMGN V ++GGSNGHFELNVFKP++V NVL+S RL+
Sbjct: 182 GSSIMPGKVNPTQCEAITMVAAQVMGNQVAVSVGGSNGHFELNVFKPLIVRNVLQSTRLL 241
Query: 362 GDRSSAFNKNCAVGIKANEAQIAKIMRES 448
D + +F +C GI AN+ IAKIMRES
Sbjct: 242 ADSAVSFTDHCVDGIVANKDNIAKIMRES 270
>AF025459-5|AAB70982.1| 501|Caenorhabditis elegans Fumarase protein
1, isoform a protein.
Length = 501
Score = 237 bits (579), Expect = 4e-63
Identities = 110/149 (73%), Positives = 125/149 (83%)
Frame = +2
Query: 2 PFESAPNKFEALACHDAMVEVSGALNTIAVSLMKIGNDIRLLASGPRCGLAELMLPENEP 181
PF +APNKFEALA HDA+VEV GALNT+AVS MKIGNDIR L SGPRCGL EL LPENEP
Sbjct: 295 PFVTAPNKFEALAAHDALVEVHGALNTVAVSFMKIGNDIRFLGSGPRCGLGELSLPENEP 354
Query: 182 GSSIMPGKVNPTQCEALTMIAVQVMGNHVGCTIGGSNGHFELNVFKPMMVANVLRSIRLI 361
GSSIMPGKVNPTQCEA+TM+A QVMGN V ++GGSNGHFELNVFKP++V NVL+S RL+
Sbjct: 355 GSSIMPGKVNPTQCEAITMVAAQVMGNQVAVSVGGSNGHFELNVFKPLIVRNVLQSTRLL 414
Query: 362 GDRSSAFNKNCAVGIKANEAQIAKIMRES 448
D + +F +C GI AN+ IAKIMRES
Sbjct: 415 ADSAVSFTDHCVDGIVANKDNIAKIMRES 443
>U18385-1|AAA62505.1| 276|Caenorhabditis elegans collagen protein.
Length = 276
Score = 30.7 bits (66), Expect = 0.51
Identities = 20/86 (23%), Positives = 35/86 (40%)
Frame = +1
Query: 190 DHAR*SESDAVRGPDHDRGPSDGQPRRLHYRGEQRALRAERLQTDDGRQRAALHQAHWRP 369
D ES R D+ P D Q ++ H ++ + + D + A +P
Sbjct: 108 DQLEDQESKDHREMQEDQEPPDVQDQQDHVENQEPSTSQDSQDVQDHKDHAEKPD---QP 164
Query: 370 IVSVQQELRRRYQGE*SPDREDHEGI 447
+ QE R + +P+ +DH+GI
Sbjct: 165 EIQEHQETMERLERTETPEDQDHQGI 190
>AL032626-2|CAA21539.1| 571|Caenorhabditis elegans Hypothetical
protein Y37D8A.2 protein.
Length = 571
Score = 29.5 bits (63), Expect = 1.2
Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 26 FEALACHDA-MVEVSGALNTIAVSLMKIGNDIRLLASGPRCGLAELMLPENE 178
F+ +A H M++++G L +A+ K N ++ + C +LP+NE
Sbjct: 172 FKQIAVHPIFMIQIAGDLEDLAMKFKKPENPKKVFSGPGHCSALVKLLPKNE 223
>AL032652-1|CAA21709.1| 317|Caenorhabditis elegans Hypothetical
protein Y63D3A.2 protein.
Length = 317
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +1
Query: 247 PSDGQPRRLHYRGEQRALRAERLQTDDGRQRAALHQAHWRPIVSV 381
P + + R+ +RG+ R ++ ++G +A + W PIV V
Sbjct: 269 PGELEKLRVQFRGKTFQFRGYHIERNEGDAKAMISVDPWSPIVEV 313
>Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical
protein F16A11.3b protein.
Length = 1364
Score = 28.3 bits (60), Expect = 2.7
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +2
Query: 5 FESAPNKFEALACHDAMVEVSGALNTIAVSLMKIGNDIRLLASGPRCGLAEL-MLPENEP 181
F++ P F+A+AC+ + E L+ I + M + IR + L E ML ++
Sbjct: 148 FDAIPFLFDAVACNPELYEYQNTLSMIVMIAMTGNSMIRRQSINAVQALMERNMLDQDFM 207
Query: 182 GSSIMPGKVN 211
++PG N
Sbjct: 208 RDGVVPGLFN 217
>Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical
protein F16A11.3a protein.
Length = 1490
Score = 28.3 bits (60), Expect = 2.7
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +2
Query: 5 FESAPNKFEALACHDAMVEVSGALNTIAVSLMKIGNDIRLLASGPRCGLAEL-MLPENEP 181
F++ P F+A+AC+ + E L+ I + M + IR + L E ML ++
Sbjct: 148 FDAIPFLFDAVACNPELYEYQNTLSMIVMIAMTGNSMIRRQSINAVQALMERNMLDQDFM 207
Query: 182 GSSIMPGKVN 211
++PG N
Sbjct: 208 RDGVVPGLFN 217
>Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical
protein F16A11.3c protein.
Length = 1046
Score = 28.3 bits (60), Expect = 2.7
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +2
Query: 5 FESAPNKFEALACHDAMVEVSGALNTIAVSLMKIGNDIRLLASGPRCGLAEL-MLPENEP 181
F++ P F+A+AC+ + E L+ I + M + IR + L E ML ++
Sbjct: 148 FDAIPFLFDAVACNPELYEYQNTLSMIVMIAMTGNSMIRRQSINAVQALMERNMLDQDFM 207
Query: 182 GSSIMPGKVN 211
++PG N
Sbjct: 208 RDGVVPGLFN 217
>Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical
protein F16A11.3b protein.
Length = 1364
Score = 28.3 bits (60), Expect = 2.7
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +2
Query: 5 FESAPNKFEALACHDAMVEVSGALNTIAVSLMKIGNDIRLLASGPRCGLAEL-MLPENEP 181
F++ P F+A+AC+ + E L+ I + M + IR + L E ML ++
Sbjct: 148 FDAIPFLFDAVACNPELYEYQNTLSMIVMIAMTGNSMIRRQSINAVQALMERNMLDQDFM 207
Query: 182 GSSIMPGKVN 211
++PG N
Sbjct: 208 RDGVVPGLFN 217
>Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical
protein F16A11.3a protein.
Length = 1490
Score = 28.3 bits (60), Expect = 2.7
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +2
Query: 5 FESAPNKFEALACHDAMVEVSGALNTIAVSLMKIGNDIRLLASGPRCGLAEL-MLPENEP 181
F++ P F+A+AC+ + E L+ I + M + IR + L E ML ++
Sbjct: 148 FDAIPFLFDAVACNPELYEYQNTLSMIVMIAMTGNSMIRRQSINAVQALMERNMLDQDFM 207
Query: 182 GSSIMPGKVN 211
++PG N
Sbjct: 208 RDGVVPGLFN 217
>Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical
protein F16A11.3c protein.
Length = 1046
Score = 28.3 bits (60), Expect = 2.7
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +2
Query: 5 FESAPNKFEALACHDAMVEVSGALNTIAVSLMKIGNDIRLLASGPRCGLAEL-MLPENEP 181
F++ P F+A+AC+ + E L+ I + M + IR + L E ML ++
Sbjct: 148 FDAIPFLFDAVACNPELYEYQNTLSMIVMIAMTGNSMIRRQSINAVQALMERNMLDQDFM 207
Query: 182 GSSIMPGKVN 211
++PG N
Sbjct: 208 RDGVVPGLFN 217
>AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical
protein Y66D12A.14 protein.
Length = 2870
Score = 27.5 bits (58), Expect = 4.8
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -2
Query: 340 HVGDHHRFEDVQLEVPVAPPYSAADVVAHHLD 245
HV H +F +++L+ P PY +A LD
Sbjct: 244 HVASHPQFLELKLKAPFLIPYKTLAQIAEFLD 275
>Z81016-5|CAB02665.3| 640|Caenorhabditis elegans Hypothetical
protein F21G4.1 protein.
Length = 640
Score = 27.1 bits (57), Expect = 6.3
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -3
Query: 210 FTLPGMIEDPGSFSGSISSARPQRGPE--ASSRMSLPIFMRDTAMVFR 73
F P + P SF + +RPQ PE + + ++ +F+R+ MV +
Sbjct: 260 FFFPRTYKHPDSFHLMLEHSRPQVSPEDRLTFKENITLFLREFPMVLK 307
>Z71266-5|CAD56593.1| 370|Caenorhabditis elegans Hypothetical
protein R06C7.5b protein.
Length = 370
Score = 27.1 bits (57), Expect = 6.3
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +2
Query: 71 ALNTIAVSLMKIGNDIRLLASGPRCGLAELMLP--ENEPGSSIMPGKVNPTQCE 226
+L+ + + K+ DIR+L + EL+ P +++ GSS MP K NP + E
Sbjct: 250 SLSLLGAAAKKVCTDIRVLQA-----FGELLEPFEKDQIGSSAMPYKKNPMKSE 298
>Z71266-4|CAA95843.1| 478|Caenorhabditis elegans Hypothetical
protein R06C7.5a protein.
Length = 478
Score = 27.1 bits (57), Expect = 6.3
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +2
Query: 71 ALNTIAVSLMKIGNDIRLLASGPRCGLAELMLP--ENEPGSSIMPGKVNPTQCE 226
+L+ + + K+ DIR+L + EL+ P +++ GSS MP K NP + E
Sbjct: 250 SLSLLGAAAKKVCTDIRVLQA-----FGELLEPFEKDQIGSSAMPYKKNPMKSE 298
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.1 bits (57), Expect = 6.3
Identities = 22/69 (31%), Positives = 25/69 (36%)
Frame = -2
Query: 256 HHLDRDHGQGLALRRIHFTWHDRGSGFVLGQHQLGETAARPGGQQPDVVADLHEGHGDGV 77
HH HG +H H G G G H A P + HE HGD
Sbjct: 597 HHAPAHHGHH-GEHGVHHGHHGAGYGAHHGHHGAHHHHA-PHHEH-------HEHHGDHH 647
Query: 76 QGSGHLHHG 50
GS +HHG
Sbjct: 648 HGSHGVHHG 656
>AF067949-8|AAX88812.1| 565|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 5, isoform c protein.
Length = 565
Score = 26.6 bits (56), Expect = 8.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3
Query: 321 GLKTFSSKCPLLPPIVQPTWLPITWTAIMVRAS 223
G + F + L P I TWL + TA+ + AS
Sbjct: 14 GFRVFYNLFRLFPLIYSNTWLTLVLTAVTIAAS 46
>AF067949-7|AAO25995.2| 626|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 5, isoform b protein.
Length = 626
Score = 26.6 bits (56), Expect = 8.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3
Query: 321 GLKTFSSKCPLLPPIVQPTWLPITWTAIMVRAS 223
G + F + L P I TWL + TA+ + AS
Sbjct: 14 GFRVFYNLFRLFPLIYSNTWLTLVLTAVTIAAS 46
>AF067949-6|AAC19238.1| 598|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 5, isoform a protein.
Length = 598
Score = 26.6 bits (56), Expect = 8.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3
Query: 321 GLKTFSSKCPLLPPIVQPTWLPITWTAIMVRAS 223
G + F + L P I TWL + TA+ + AS
Sbjct: 14 GFRVFYNLFRLFPLIYSNTWLTLVLTAVTIAAS 46
>AF016443-3|AAC24281.1| 395|Caenorhabditis elegans Hypothetical
protein C17E7.7 protein.
Length = 395
Score = 26.6 bits (56), Expect = 8.3
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 423 WASFALIPTAQFLLNADDRSPMSLMERSTLATIIGLKTFSSKCPL 289
W+ FAL T +FL N S + E+ L L+ +SKC L
Sbjct: 199 WSFFALYTTVEFLSNMPFMSKLQTAEKMCL-----LRNSASKCSL 238
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,384,929
Number of Sequences: 27780
Number of extensions: 191137
Number of successful extensions: 669
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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